RNA–Protein interactions for RNA: ENST00000621325.1

LIME1-210, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 2,410 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-210ENST00000621325 CBR1P16152 277 aa18.16■□□□□ 0.5
LIME1-210ENST00000621325 FBXW12Q6X9E4 464 aa18.16■□□□□ 0.5
LIME1-210ENST00000621325 BEND4Q6ZU67 534 aa18.16■□□□□ 0.5
LIME1-210ENST00000621325 GTF3C1Q12789 2109 aa18.16■□□□□ 0.5
LIME1-210ENST00000621325 IGHV3-64DA0A0J9YX35 117 aa18.15■□□□□ 0.5
LIME1-210ENST00000621325 FAM90A10PA6NDY2 464 aa18.15■□□□□ 0.5
LIME1-210ENST00000621325 FAM90A18PA6NE21 464 aa18.15■□□□□ 0.5
LIME1-210ENST00000621325 FAM90A16PA6NEW6 464 aa18.15■□□□□ 0.5
LIME1-210ENST00000621325 FAM90A20PA6NIJ5 464 aa18.15■□□□□ 0.5
LIME1-210ENST00000621325 FAM90A8PA6NJQ4 464 aa18.15■□□□□ 0.5
LIME1-210ENST00000621325 FAM90A7PA6NKC0 464 aa18.15■□□□□ 0.5
LIME1-210ENST00000621325 OR5B21A6NL26 309 aa18.15■□□□□ 0.5
LIME1-210ENST00000621325 FAM90A22PA8MWA6 464 aa18.15■□□□□ 0.5
LIME1-210ENST00000621325 FAM90A12PA8MX19 464 aa18.15■□□□□ 0.5
LIME1-210ENST00000621325 FAM90A5PA8MXJ8 464 aa18.15■□□□□ 0.5
LIME1-210ENST00000621325 FAM90A23PA8MXZ1 464 aa18.15■□□□□ 0.5
LIME1-210ENST00000621325 H0YIZ8 118 aa18.15■□□□□ 0.5
LIME1-210ENST00000621325 IFNA2P01563 188 aa18.15■□□□□ 0.5
LIME1-210ENST00000621325 FAM90A15PP0C7V4 464 aa18.15■□□□□ 0.5
LIME1-210ENST00000621325 FAM90A13PP0C7W8 464 aa18.15■□□□□ 0.5
LIME1-210ENST00000621325 FAM90A14PP0C7W9 464 aa18.15■□□□□ 0.5
LIME1-210ENST00000621325 FAM90A24PP0C7X0 464 aa18.15■□□□□ 0.5
LIME1-210ENST00000621325 ZNF728P0DKX0 622 aa18.15■□□□□ 0.5
LIME1-210ENST00000621325 ECI1P42126 302 aa18.15■□□□□ 0.5
LIME1-210ENST00000621325 WDR86Q86TI4 376 aa18.15■□□□□ 0.5
LIME1-210ENST00000621325 SLC25A40Q8TBP6 338 aa18.15■□□□□ 0.5
LIME1-210ENST00000621325 RNF126Q9BV68 326 aa18.15■□□□□ 0.5
LIME1-210ENST00000621325 OR51I2Q9H344 312 aa18.15■□□□□ 0.5
LIME1-210ENST00000621325 LUZP4Q9P127 313 aa18.15■□□□□ 0.5
LIME1-210ENST00000621325 RCC2Q9P258 522 aaKnown RBP18.15■□□□□ 0.5
LIME1-210ENST00000621325 A0A0D9SG52 128 aa18.15■□□□□ 0.5
LIME1-210ENST00000621325 TEX13DA0A0J9YY54 714 aaPredicted RBP18.15■□□□□ 0.5
LIME1-210ENST00000621325 PMELP40967 661 aa18.15■□□□□ 0.5
LIME1-210ENST00000621325 PIGPP57054 158 aa18.15■□□□□ 0.5
LIME1-210ENST00000621325 STX12Q86Y82 276 aa18.15■□□□□ 0.5
LIME1-210ENST00000621325 ZNF573Q86YE8 665 aa18.15■□□□□ 0.5
LIME1-210ENST00000621325 WDR31Q8NA23 367 aa18.15■□□□□ 0.5
LIME1-210ENST00000621325 LHX6Q9UPM6 363 aa18.15■□□□□ 0.5
LIME1-210ENST00000621325 CRYM-AS1A6NIL9 109 aa18.14■□□□□ 0.5
LIME1-210ENST00000621325 S100A9P06702 114 aaKnown RBP18.14■□□□□ 0.5
LIME1-210ENST00000621325 COX5AP20674 150 aa18.14■□□□□ 0.5
LIME1-210ENST00000621325 S100PP25815 95 aa18.14■□□□□ 0.5
LIME1-210ENST00000621325 POM121Q96HA1 1249 aa18.14■□□□□ 0.5
LIME1-210ENST00000621325 A0A1B0GV90 55 aa18.14■□□□□ 0.49
LIME1-210ENST00000621325 OR2F2O95006 317 aa18.14■□□□□ 0.49
LIME1-210ENST00000621325 GPX4P36969 197 aaPredicted RBP18.14■□□□□ 0.49
LIME1-210ENST00000621325 MRPL49Q13405 166 aaKnown RBP18.14■□□□□ 0.49
LIME1-210ENST00000621325 OR2F1Q13607 317 aa18.14■□□□□ 0.49
LIME1-210ENST00000621325 ZNF345Q14585 488 aa18.14■□□□□ 0.49
LIME1-210ENST00000621325 SP6Q3SY56 376 aa18.14■□□□□ 0.49
LIME1-210ENST00000621325 ALKBH2Q6NS38 261 aa18.14■□□□□ 0.49
LIME1-210ENST00000621325 INO80CQ6PI98 192 aaPredicted RBP18.14■□□□□ 0.49
LIME1-210ENST00000621325 ACOT7LQ6ZUV0 252 aa18.14■□□□□ 0.49
LIME1-210ENST00000621325 SEM1Q6ZVN7 128 aa18.14■□□□□ 0.49
LIME1-210ENST00000621325 CBLN2Q8IUK8 224 aa18.14■□□□□ 0.49
LIME1-210ENST00000621325 SGPP2Q8IWX5 399 aa18.14■□□□□ 0.49
LIME1-210ENST00000621325 NARS2Q96I59 477 aaKnown RBP18.14■□□□□ 0.49
LIME1-210ENST00000621325 OPN3Q9H1Y3 402 aaPredicted RBP18.14■□□□□ 0.49
LIME1-210ENST00000621325 TNFSF13O75888 250 aa18.13■□□□□ 0.49
LIME1-210ENST00000621325 SFTPCP11686 197 aa18.13■□□□□ 0.49
LIME1-210ENST00000621325 RBMXP38159 391 aaKnown RBP18.13■□□□□ 0.49
LIME1-210ENST00000621325 UCP2P55851 309 aa18.13■□□□□ 0.49
LIME1-210ENST00000621325 PHLDA2Q53GA4 152 aa18.13■□□□□ 0.49
LIME1-210ENST00000621325 IGFL3Q6UXB1 125 aa18.13■□□□□ 0.49
LIME1-210ENST00000621325 ASCL5Q7RTU5 278 aa18.13■□□□□ 0.49
LIME1-210ENST00000621325 ZNF610Q8N9Z0 462 aa18.13■□□□□ 0.49
LIME1-210ENST00000621325 OR1J1Q8NGS3 322 aa18.13■□□□□ 0.49
LIME1-210ENST00000621325 NEK7Q8TDX7 302 aa18.13■□□□□ 0.49
LIME1-210ENST00000621325 SCARB1Q8WTV0 552 aa18.13■□□□□ 0.49
LIME1-210ENST00000621325 GLYATL2Q8WU03 294 aa18.13■□□□□ 0.49
LIME1-210ENST00000621325 DCHS1Q96JQ0 3298 aa18.13■□□□□ 0.49
LIME1-210ENST00000621325 NAPSAO96009 420 aa18.13■□□□□ 0.49
LIME1-210ENST00000621325 GLI4P10075 376 aa18.13■□□□□ 0.49
LIME1-210ENST00000621325 PVALBP20472 110 aaPredicted RBP18.13■□□□□ 0.49
LIME1-210ENST00000621325 AADACP22760 399 aa18.13■□□□□ 0.49
LIME1-210ENST00000621325 IL24Q13007 206 aa18.13■□□□□ 0.49
LIME1-210ENST00000621325 MPV17LQ2QL34 196 aa18.13■□□□□ 0.49
LIME1-210ENST00000621325 EIF4E3Q8N5X7 224 aaKnown RBP18.13■□□□□ 0.49
LIME1-210ENST00000621325 RRNAD1Q96FB5 475 aaKnown RBP18.13■□□□□ 0.49
LIME1-210ENST00000621325 AHRRA9YTQ3 701 aa18.12■□□□□ 0.49
LIME1-210ENST00000621325 HS3ST1O14792 307 aa18.12■□□□□ 0.49
LIME1-210ENST00000621325 CNOT4O95628 575 aaKnown RBP18.12■□□□□ 0.49
LIME1-210ENST00000621325 SNRPEP62304 92 aaKnown RBP18.12■□□□□ 0.49
LIME1-210ENST00000621325 CYCSP99999 105 aaKnown RBP18.12■□□□□ 0.49
LIME1-210ENST00000621325 RBM39Q14498 530 aaKnown RBP18.12■□□□□ 0.49
LIME1-210ENST00000621325 C9orf152Q5JTZ5 239 aa18.12■□□□□ 0.49
LIME1-210ENST00000621325 CXorf67Q86X51 503 aaPredicted RBP18.12■□□□□ 0.49
LIME1-210ENST00000621325 OR11L1Q8NGX0 322 aa18.12■□□□□ 0.49
LIME1-210ENST00000621325 DCUN1D4Q92564 292 aa18.12■□□□□ 0.49
LIME1-210ENST00000621325 Q9N2K0 584 aa18.12■□□□□ 0.49
LIME1-210ENST00000621325 GSKIPQ9P0R6 139 aa18.12■□□□□ 0.49
LIME1-210ENST00000621325 MAP1BP46821 2468 aaKnown RBP18.12■□□□□ 0.49
LIME1-210ENST00000621325 SCTP09683 121 aa18.12■□□□□ 0.49
LIME1-210ENST00000621325 MPV17P39210 176 aa18.12■□□□□ 0.49
LIME1-210ENST00000621325 PSG7Q13046 419 aa18.12■□□□□ 0.49
LIME1-210ENST00000621325 SNTB1Q13884 538 aaKnown RBP18.12■□□□□ 0.49
LIME1-210ENST00000621325 FAM58AQ8N1B3 248 aa18.12■□□□□ 0.49
LIME1-210ENST00000621325 SUMF2Q8NBJ7 301 aa18.12■□□□□ 0.49
LIME1-210ENST00000621325 POC1AQ8NBT0 407 aa18.12■□□□□ 0.49
LIME1-210ENST00000621325 GTF3AQ92664 365 aaKnown RBP18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms