RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 ANKRD30BLA7E2S9 258 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 KIR3DL2P43630 455 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 ACVR1Q04771 509 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 KRTCAP3Q53RY4 240 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 ZNF770Q6IQ21 691 aaPredicted RBP4.44□□□□□ -1.7
VPS13D-214ENST00000620676 HSPB8Q9UJY1 196 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 WIPI2Q9Y4P8 454 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 ARFGEF2Q9Y6D5 1785 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 SYNGR4O95473 234 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 LCNL1Q6ZST4 164 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.44□□□□□ -1.7
VPS13D-214ENST00000620676 TMEM256Q8N2U0 113 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 MCRIP2Q9BUT9 160 aaKnown RBP4.44□□□□□ -1.7
VPS13D-214ENST00000620676 TTC32Q5I0X7 151 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 ZNF793Q6ZN11 406 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 C1orf122Q6ZSJ8 110 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 RTN4RL2Q86UN3 420 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 CBARPQ8N350 705 aaPredicted RBP4.44□□□□□ -1.7
VPS13D-214ENST00000620676 CLDN23Q96B33 292 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 C4orf45Q96LM5 186 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 SSBP3Q9BWW4 388 aaPredicted RBP4.44□□□□□ -1.7
VPS13D-214ENST00000620676 CACNA1HO95180 2353 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 A0A1B0GV72 72 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 ZNF708P17019 499 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 ZNF133P52736 654 aaPredicted RBP4.44□□□□□ -1.7
VPS13D-214ENST00000620676 MKXQ8IYA7 352 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 MSI2Q96DH6 328 aaKnown RBP4.44□□□□□ -1.7
VPS13D-214ENST00000620676 HES4Q9HCC6 221 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 F5P12259 2224 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 A0A1W2PNR3 127 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 RPL27P61353 136 aaKnown RBP4.44□□□□□ -1.7
VPS13D-214ENST00000620676 ARG2P78540 354 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 SPRYD7Q5W111 196 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 DGAT2L6Q6ZPD8 337 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 LINC00696Q6ZRV3 163 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 RBKSQ9H477 322 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 WDR54Q9H977 334 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 LAMTOR2Q9Y2Q5 125 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 BMI1P35226 326 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 OR6C1Q96RD1 312 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 TRIP11Q15643 1979 aa4.43□□□□□ -1.7
VPS13D-214ENST00000620676 CD74P04233 296 aa4.43□□□□□ -1.7
VPS13D-214ENST00000620676 ARR3P36575 388 aa4.43□□□□□ -1.7
VPS13D-214ENST00000620676 RFESDQ8TAC1 157 aa4.43□□□□□ -1.7
VPS13D-214ENST00000620676 SARGQ9BW04 601 aa4.43□□□□□ -1.7
VPS13D-214ENST00000620676 ANGPTL4Q9BY76 406 aa4.43□□□□□ -1.7
VPS13D-214ENST00000620676 MRPS18AQ9NVS2 196 aaKnown RBP4.43□□□□□ -1.7
VPS13D-214ENST00000620676 PNLIPP16233 465 aa4.43□□□□□ -1.7
VPS13D-214ENST00000620676 UBE2G1P62253 170 aa4.43□□□□□ -1.7
VPS13D-214ENST00000620676 BHLHA15Q7RTS1 189 aaPredicted RBP4.43□□□□□ -1.7
VPS13D-214ENST00000620676 CXorf67Q86X51 503 aaPredicted RBP4.43□□□□□ -1.7
VPS13D-214ENST00000620676 SHROOM3Q8TF72 1996 aa4.43□□□□□ -1.7
VPS13D-214ENST00000620676 TRAV38-1A0A0B4J264 116 aa4.43□□□□□ -1.7
VPS13D-214ENST00000620676 PPIAL4DF5H284 164 aa4.43□□□□□ -1.7
VPS13D-214ENST00000620676 CTLA4P16410 223 aa4.43□□□□□ -1.7
VPS13D-214ENST00000620676 CEACAM8P31997 349 aaPredicted RBP4.43□□□□□ -1.7
VPS13D-214ENST00000620676 SRP14P37108 136 aaKnown RBP4.43□□□□□ -1.7
VPS13D-214ENST00000620676 OR10W1Q8NGF6 305 aa4.43□□□□□ -1.7
VPS13D-214ENST00000620676 C11orf40Q8WZ69 217 aa4.43□□□□□ -1.7
VPS13D-214ENST00000620676 C19orf53Q9UNZ5 99 aaPredicted RBP4.43□□□□□ -1.7
VPS13D-214ENST00000620676 ZGLP1P0C6A0 271 aa4.43□□□□□ -1.7
VPS13D-214ENST00000620676 NPBWR2P48146 333 aa4.43□□□□□ -1.7
VPS13D-214ENST00000620676 ALKBH6Q3KRA9 238 aa4.43□□□□□ -1.7
VPS13D-214ENST00000620676 TSEN54Q7Z6J9 526 aaKnown RBP4.43□□□□□ -1.7
VPS13D-214ENST00000620676 MRPL30Q8TCC3 161 aaKnown RBP4.43□□□□□ -1.7
VPS13D-214ENST00000620676 APOBEC3BQ9UH17 382 aaKnown RBP4.43□□□□□ -1.7
VPS13D-214ENST00000620676 TRDCB7Z8K6 153 aa4.43□□□□□ -1.7
VPS13D-214ENST00000620676 CEACAM6P40199 344 aa4.43□□□□□ -1.7
VPS13D-214ENST00000620676 ZAR1Q86SH2 424 aa4.43□□□□□ -1.7
VPS13D-214ENST00000620676 TMEM116Q8NCL8 245 aa4.43□□□□□ -1.7
VPS13D-214ENST00000620676 FZR1Q9UM11 496 aa4.43□□□□□ -1.7
VPS13D-214ENST00000620676 CENPVL1A0A0U1RR11 272 aa4.43□□□□□ -1.7
VPS13D-214ENST00000620676 A8MWP6 167 aa4.43□□□□□ -1.7
VPS13D-214ENST00000620676 M0QZQ0 153 aa4.43□□□□□ -1.7
VPS13D-214ENST00000620676 FCARP24071 287 aa4.43□□□□□ -1.7
VPS13D-214ENST00000620676 ARHGEF39Q8N4T4 335 aa4.43□□□□□ -1.7
VPS13D-214ENST00000620676 KCND3Q9UK17 655 aa4.43□□□□□ -1.7
VPS13D-214ENST00000620676 APELAP0DMC3 54 aa4.43□□□□□ -1.7
VPS13D-214ENST00000620676 STPG3Q8N7X2 389 aa4.43□□□□□ -1.7
VPS13D-214ENST00000620676 OR1L4Q8NGR5 311 aa4.43□□□□□ -1.7
VPS13D-214ENST00000620676 A0A0U1RQV5 110 aa4.43□□□□□ -1.7
VPS13D-214ENST00000620676 SLC22A20A6NK97 555 aa4.43□□□□□ -1.7
VPS13D-214ENST00000620676 CNN3Q15417 329 aaKnown RBP4.43□□□□□ -1.7
VPS13D-214ENST00000620676 DOK3Q7L591 496 aa4.43□□□□□ -1.7
VPS13D-214ENST00000620676 BMPERQ8N8U9 685 aa4.43□□□□□ -1.7
VPS13D-214ENST00000620676 FAM157CP0CG43 387 aa4.43□□□□□ -1.7
VPS13D-214ENST00000620676 NAT6Q93015 286 aa4.43□□□□□ -1.7
VPS13D-214ENST00000620676 SOSTQ9BQB4 213 aa4.43□□□□□ -1.7
VPS13D-214ENST00000620676 GNB4Q9HAV0 340 aa4.43□□□□□ -1.7
VPS13D-214ENST00000620676 YTHDF2Q9Y5A9 579 aaKnown RBP4.43□□□□□ -1.7
VPS13D-214ENST00000620676 CNOT1A5YKK6 2376 aaKnown RBP4.43□□□□□ -1.7
VPS13D-214ENST00000620676 EIF3IQ13347 325 aaKnown RBP4.43□□□□□ -1.7
VPS13D-214ENST00000620676 RNPS1Q15287 305 aaKnown RBP4.43□□□□□ -1.7
VPS13D-214ENST00000620676 MRGPRX4Q96LA9 322 aa4.43□□□□□ -1.7
VPS13D-214ENST00000620676 P4HTMQ9NXG6 502 aa4.43□□□□□ -1.7
VPS13D-214ENST00000620676 SS18L2Q9UHA2 77 aa4.43□□□□□ -1.7
VPS13D-214ENST00000620676 CCL25O15444 150 aa4.43□□□□□ -1.7
VPS13D-214ENST00000620676 RUNX2Q13950 521 aa4.43□□□□□ -1.7
VPS13D-214ENST00000620676 CCL28Q9NRJ3 127 aa4.43□□□□□ -1.7
VPS13D-214ENST00000620676 IGHV3-21A0A0B4J1V1 117 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms