RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 TK1P04183 234 aa6.68□□□□□ -1.34
CPNE3-209ENST00000620393 CSN2P05814 226 aa6.68□□□□□ -1.34
CPNE3-209ENST00000620393 LPLP06858 475 aa6.68□□□□□ -1.34
CPNE3-209ENST00000620393 WNT2P09544 360 aa6.68□□□□□ -1.34
CPNE3-209ENST00000620393 CSF3P09919 207 aa6.68□□□□□ -1.34
CPNE3-209ENST00000620393 CBX5P45973 191 aa6.68□□□□□ -1.34
CPNE3-209ENST00000620393 OR3A1P47881 315 aa6.68□□□□□ -1.34
CPNE3-209ENST00000620393 DSCR9P59020 149 aa6.68□□□□□ -1.34
CPNE3-209ENST00000620393 IL13RA1P78552 427 aa6.68□□□□□ -1.34
CPNE3-209ENST00000620393 MRPS15P82914 257 aaKnown RBP6.68□□□□□ -1.34
CPNE3-209ENST00000620393 PAX5Q02548 391 aa6.68□□□□□ -1.34
CPNE3-209ENST00000620393 SSBP1Q04837 148 aaKnown RBP6.68□□□□□ -1.34
CPNE3-209ENST00000620393 GRK1Q15835 563 aa6.68□□□□□ -1.34
CPNE3-209ENST00000620393 DEFB113Q30KQ7 82 aa6.68□□□□□ -1.34
CPNE3-209ENST00000620393 AVPI1Q5T686 147 aa6.68□□□□□ -1.34
CPNE3-209ENST00000620393 SLC35E4Q6ICL7 350 aa6.68□□□□□ -1.34
CPNE3-209ENST00000620393 LYPD2Q6UXB3 125 aa6.68□□□□□ -1.34
CPNE3-209ENST00000620393 LRRC75A-AS1Q8N1F1 130 aa6.68□□□□□ -1.34
CPNE3-209ENST00000620393 GAPTQ8N292 157 aa6.68□□□□□ -1.34
CPNE3-209ENST00000620393 ZNF525Q8N782 197 aa6.68□□□□□ -1.34
CPNE3-209ENST00000620393 ASCC1Q8N9N2 400 aaKnown RBP6.68□□□□□ -1.34
CPNE3-209ENST00000620393 ZNRF1Q8ND25 227 aa6.68□□□□□ -1.34
CPNE3-209ENST00000620393 NEK7Q8TDX7 302 aa6.68□□□□□ -1.34
CPNE3-209ENST00000620393 NUDCD2Q8WVJ2 157 aa6.68□□□□□ -1.34
CPNE3-209ENST00000620393 DYRK2Q92630 601 aa6.68□□□□□ -1.34
CPNE3-209ENST00000620393 GCDHQ92947 438 aaPredicted RBP6.68□□□□□ -1.34
CPNE3-209ENST00000620393 NINJ1Q92982 152 aa6.68□□□□□ -1.34
CPNE3-209ENST00000620393 BORCS5Q969J3 196 aa6.68□□□□□ -1.34
CPNE3-209ENST00000620393 MBD6Q96DN6 1003 aa6.68□□□□□ -1.34
CPNE3-209ENST00000620393 CHST6Q9GZX3 395 aa6.68□□□□□ -1.34
CPNE3-209ENST00000620393 PPA2Q9H2U2 334 aa6.68□□□□□ -1.34
CPNE3-209ENST00000620393 NCOR1P1Q9H4R4 102 aa6.68□□□□□ -1.34
CPNE3-209ENST00000620393 KLK11Q9UBX7 282 aa6.68□□□□□ -1.34
CPNE3-209ENST00000620393 MIOXQ9UGB7 285 aa6.68□□□□□ -1.34
CPNE3-209ENST00000620393 RBMX2Q9Y388 322 aaKnown RBP6.68□□□□□ -1.34
CPNE3-209ENST00000620393 SPG11Q96JI7 2443 aa6.68□□□□□ -1.34
CPNE3-209ENST00000620393 CACNA1DQ01668 2161 aa6.68□□□□□ -1.34
CPNE3-209ENST00000620393 RAI1Q7Z5J4 1906 aaPredicted RBP6.68□□□□□ -1.34
CPNE3-209ENST00000620393 AKAP6Q13023 2319 aa6.67□□□□□ -1.34
CPNE3-209ENST00000620393 A0A1B0GW55 424 aa6.67□□□□□ -1.34
CPNE3-209ENST00000620393 FUOMA2VDF0 154 aa6.67□□□□□ -1.34
CPNE3-209ENST00000620393 ISPDA4D126 451 aa6.67□□□□□ -1.34
CPNE3-209ENST00000620393 CEACAM18A8MTB9 384 aa6.67□□□□□ -1.34
CPNE3-209ENST00000620393 NDUFB3O43676 98 aa6.67□□□□□ -1.34
CPNE3-209ENST00000620393 UPK1BO75841 260 aa6.67□□□□□ -1.34
CPNE3-209ENST00000620393 NAPSAO96009 420 aa6.67□□□□□ -1.34
CPNE3-209ENST00000620393 GSTT2BP0CG30 244 aa6.67□□□□□ -1.34
CPNE3-209ENST00000620393 DUX4L2P0CJ85 424 aa6.67□□□□□ -1.34
CPNE3-209ENST00000620393 DUX4L3P0CJ86 424 aa6.67□□□□□ -1.34
CPNE3-209ENST00000620393 DUX4L4P0CJ87 422 aa6.67□□□□□ -1.34
CPNE3-209ENST00000620393 DUX4L5P0CJ88 424 aa6.67□□□□□ -1.34
CPNE3-209ENST00000620393 DUX4L6P0CJ89 424 aa6.67□□□□□ -1.34
CPNE3-209ENST00000620393 DUX4L7P0CJ90 424 aa6.67□□□□□ -1.34
CPNE3-209ENST00000620393 IL7P13232 177 aa6.67□□□□□ -1.34
CPNE3-209ENST00000620393 NAT1P18440 290 aa6.67□□□□□ -1.34
CPNE3-209ENST00000620393 DTYMKP23919 212 aa6.67□□□□□ -1.34
CPNE3-209ENST00000620393 ERP29P30040 261 aaKnown RBP6.67□□□□□ -1.34
CPNE3-209ENST00000620393 IFITM3Q01628 133 aa6.67□□□□□ -1.34
CPNE3-209ENST00000620393 AESQ08117 197 aa6.67□□□□□ -1.34
CPNE3-209ENST00000620393 SRSF7Q16629 238 aaKnown RBP eCLIP6.67□□□□□ -1.34
CPNE3-209ENST00000620393 LRRC10Q5BKY1 277 aa6.67□□□□□ -1.34
CPNE3-209ENST00000620393 RNASE12Q5GAN4 147 aaKnown RBP6.67□□□□□ -1.34
CPNE3-209ENST00000620393 RSBN1Q5VWQ0 802 aaPredicted RBP6.67□□□□□ -1.34
CPNE3-209ENST00000620393 ZNF880Q6PDB4 577 aa6.67□□□□□ -1.34
CPNE3-209ENST00000620393 DUX4L9Q6RFH8 374 aaPredicted RBP6.67□□□□□ -1.34
CPNE3-209ENST00000620393 CLEC2AQ6UVW9 174 aa6.67□□□□□ -1.34
CPNE3-209ENST00000620393 ZNF841Q6ZN19 808 aa6.67□□□□□ -1.34
CPNE3-209ENST00000620393 ZNF497Q6ZNH5 498 aa6.67□□□□□ -1.34
CPNE3-209ENST00000620393 TRAPPC6BQ86SZ2 158 aa6.67□□□□□ -1.34
CPNE3-209ENST00000620393 HOGA1Q86XE5 327 aa6.67□□□□□ -1.34
CPNE3-209ENST00000620393 LYSMD2Q8IV50 215 aa6.67□□□□□ -1.34
CPNE3-209ENST00000620393 SPICQ8N5J4 248 aa6.67□□□□□ -1.34
CPNE3-209ENST00000620393 GVQW1Q8N7I0 195 aa6.67□□□□□ -1.34
CPNE3-209ENST00000620393 FAM216BQ8N7L0 139 aa6.67□□□□□ -1.34
CPNE3-209ENST00000620393 PLPPR1Q8TBJ4 325 aa6.67□□□□□ -1.34
CPNE3-209ENST00000620393 MRPL30Q8TCC3 161 aaKnown RBP6.67□□□□□ -1.34
CPNE3-209ENST00000620393 C10orf105Q8TEF2 133 aa6.67□□□□□ -1.34
CPNE3-209ENST00000620393 FAM168AQ92567 244 aa6.67□□□□□ -1.34
CPNE3-209ENST00000620393 TRIM63Q969Q1 353 aa6.67□□□□□ -1.34
CPNE3-209ENST00000620393 PERPQ96FX8 193 aa6.67□□□□□ -1.34
CPNE3-209ENST00000620393 COQ2Q96H96 371 aa6.67□□□□□ -1.34
CPNE3-209ENST00000620393 LURAP1Q96LR2 239 aa6.67□□□□□ -1.34
CPNE3-209ENST00000620393 HDHD3Q9BSH5 251 aaPredicted RBP6.67□□□□□ -1.34
CPNE3-209ENST00000620393 ST6GALNAC5Q9BVH7 336 aa6.67□□□□□ -1.34
CPNE3-209ENST00000620393 PATZ1Q9HBE1 687 aaKnown RBP6.67□□□□□ -1.34
CPNE3-209ENST00000620393 Q9N2K0 584 aa6.67□□□□□ -1.34
CPNE3-209ENST00000620393 ABCB10Q9NRK6 738 aa6.67□□□□□ -1.34
CPNE3-209ENST00000620393 TAS2R8Q9NYW2 309 aa6.67□□□□□ -1.34
CPNE3-209ENST00000620393 DUX4Q9UBX2 424 aa6.67□□□□□ -1.34
CPNE3-209ENST00000620393 ZNF107Q9UII5 783 aaPredicted RBP6.67□□□□□ -1.34
CPNE3-209ENST00000620393 ANAPC10Q9UM13 185 aa6.67□□□□□ -1.34
CPNE3-209ENST00000620393 DSCAMO60469 2012 aa6.67□□□□□ -1.34
CPNE3-209ENST00000620393 DCHS2Q6V1P9 2916 aa6.66□□□□□ -1.34
CPNE3-209ENST00000620393 TMEM30CPA0ZSE6 113 aa6.66□□□□□ -1.34
CPNE3-209ENST00000620393 MEIS3P1A6NDR6 274 aa6.66□□□□□ -1.34
CPNE3-209ENST00000620393 VWC2LB2RUY7 222 aa6.66□□□□□ -1.34
CPNE3-209ENST00000620393 DVL1O14640 695 aa6.66□□□□□ -1.34
CPNE3-209ENST00000620393 ECDO95905 644 aaPredicted RBP6.66□□□□□ -1.34
CPNE3-209ENST00000620393 FCGR3AP08637 254 aa6.66□□□□□ -1.34
CPNE3-209ENST00000620393 SELLP14151 372 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms