RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 PCOLCE2Q9UKZ9 415 aa9.89□□□□□ -0.83
CCDC144B-208ENST00000618081 VSIG4Q9Y279 399 aa9.89□□□□□ -0.83
CCDC144B-208ENST00000618081 SLC35B1P78383 322 aa9.89□□□□□ -0.83
CCDC144B-208ENST00000618081 OR2Y1Q8NGV0 311 aa9.89□□□□□ -0.83
CCDC144B-208ENST00000618081 NXF2Q9GZY0 626 aaKnown RBP9.89□□□□□ -0.83
CCDC144B-208ENST00000618081 SPINK4O60575 86 aa9.89□□□□□ -0.83
CCDC144B-208ENST00000618081 CTAG2O75638 210 aa9.89□□□□□ -0.83
CCDC144B-208ENST00000618081 KLF7O75840 302 aaPredicted RBP9.89□□□□□ -0.83
CCDC144B-208ENST00000618081 PPOXP50336 477 aa9.89□□□□□ -0.83
CCDC144B-208ENST00000618081 RHBDD2Q6NTF9 364 aa9.89□□□□□ -0.83
CCDC144B-208ENST00000618081 PWWP2BQ6NUJ5 590 aa9.89□□□□□ -0.83
CCDC144B-208ENST00000618081 Q6ZNX1 250 aa9.89□□□□□ -0.83
CCDC144B-208ENST00000618081 R3HDM4Q96D70 268 aa9.89□□□□□ -0.83
CCDC144B-208ENST00000618081 MS4A5Q9H3V2 200 aa9.89□□□□□ -0.83
CCDC144B-208ENST00000618081 ZNF665Q9H7R5 613 aa9.89□□□□□ -0.83
CCDC144B-208ENST00000618081 OPN1MWP04001 364 aa9.88□□□□□ -0.83
CCDC144B-208ENST00000618081 OPN1MW2P0DN77 364 aa9.88□□□□□ -0.83
CCDC144B-208ENST00000618081 OPN1MW3P0DN78 364 aa9.88□□□□□ -0.83
CCDC144B-208ENST00000618081 DHRS2Q13268 280 aa9.88□□□□□ -0.83
CCDC144B-208ENST00000618081 TMEM179BQ7Z7N9 219 aa9.88□□□□□ -0.83
CCDC144B-208ENST00000618081 ASB5Q8WWX0 329 aa9.88□□□□□ -0.83
CCDC144B-208ENST00000618081 SF3B5Q9BWJ5 86 aaKnown RBP9.88□□□□□ -0.83
CCDC144B-208ENST00000618081 STARD10Q9Y365 291 aa9.88□□□□□ -0.83
CCDC144B-208ENST00000618081 NDUFB6O95139 128 aa9.88□□□□□ -0.83
CCDC144B-208ENST00000618081 ZP3P21754 424 aa9.88□□□□□ -0.83
CCDC144B-208ENST00000618081 CAMPP49913 170 aa9.88□□□□□ -0.83
CCDC144B-208ENST00000618081 DYNLT3P51808 116 aa9.88□□□□□ -0.83
CCDC144B-208ENST00000618081 BRWD3Q6RI45 1802 aa9.88□□□□□ -0.83
CCDC144B-208ENST00000618081 DUXBA0A1W2PPF3 345 aa9.88□□□□□ -0.83
CCDC144B-208ENST00000618081 TMEM210A6NLX4 147 aa9.88□□□□□ -0.83
CCDC144B-208ENST00000618081 AGFG2O95081 481 aa9.88□□□□□ -0.83
CCDC144B-208ENST00000618081 FABP4P15090 132 aa9.88□□□□□ -0.83
CCDC144B-208ENST00000618081 SLC6A1P30531 599 aa9.88□□□□□ -0.83
CCDC144B-208ENST00000618081 LSM6P62312 80 aaKnown RBP9.88□□□□□ -0.83
CCDC144B-208ENST00000618081 MRPS11P82912 194 aaKnown RBP9.88□□□□□ -0.83
CCDC144B-208ENST00000618081 CLRN3Q8NCR9 226 aa9.88□□□□□ -0.83
CCDC144B-208ENST00000618081 NFAM1Q8NET5 270 aaPredicted RBP9.88□□□□□ -0.83
CCDC144B-208ENST00000618081 CST2P09228 141 aa9.88□□□□□ -0.83
CCDC144B-208ENST00000618081 SULT1A2P50226 295 aa9.88□□□□□ -0.83
CCDC144B-208ENST00000618081 DLX1P56177 255 aa9.88□□□□□ -0.83
CCDC144B-208ENST00000618081 TIAL1Q01085 375 aaKnown RBP eCLIP9.88□□□□□ -0.83
CCDC144B-208ENST00000618081 WDR13Q9H1Z4 485 aa9.88□□□□□ -0.83
CCDC144B-208ENST00000618081 STRCP1A6NGW2 1772 aa9.88□□□□□ -0.83
CCDC144B-208ENST00000618081 C9orf172C9J069 976 aa9.88□□□□□ -0.83
CCDC144B-208ENST00000618081 RGS13O14921 159 aa9.88□□□□□ -0.83
CCDC144B-208ENST00000618081 MGPP08493 103 aa9.88□□□□□ -0.83
CCDC144B-208ENST00000618081 TBC1D26Q86UD7 250 aa9.88□□□□□ -0.83
CCDC144B-208ENST00000618081 ZNF683Q8IZ20 524 aa9.88□□□□□ -0.83
CCDC144B-208ENST00000618081 STXBP6Q8NFX7 210 aa9.88□□□□□ -0.83
CCDC144B-208ENST00000618081 FLYWCH2Q96CP2 140 aaKnown RBP9.88□□□□□ -0.83
CCDC144B-208ENST00000618081 SLC2A9Q9NRM0 540 aa9.88□□□□□ -0.83
CCDC144B-208ENST00000618081 CLN8Q9UBY8 286 aa9.88□□□□□ -0.83
CCDC144B-208ENST00000618081 PRNDQ9UKY0 176 aa9.88□□□□□ -0.83
CCDC144B-208ENST00000618081 CCL21O00585 134 aa9.88□□□□□ -0.83
CCDC144B-208ENST00000618081 SS18L1O75177 396 aaPredicted RBP9.88□□□□□ -0.83
CCDC144B-208ENST00000618081 OR2C3Q8N628 320 aa9.88□□□□□ -0.83
CCDC144B-208ENST00000618081 CNTD2Q9H8S5 307 aa9.88□□□□□ -0.83
CCDC144B-208ENST00000618081 ZNF407Q9C0G0 2248 aa9.88□□□□□ -0.83
CCDC144B-208ENST00000618081 H3BMH7 237 aa9.88□□□□□ -0.83
CCDC144B-208ENST00000618081 SFT2D2O95562 160 aa9.88□□□□□ -0.83
CCDC144B-208ENST00000618081 FUCA1P04066 466 aa9.88□□□□□ -0.83
CCDC144B-208ENST00000618081 AVPR2P30518 371 aa9.88□□□□□ -0.83
CCDC144B-208ENST00000618081 TMEM37Q8WXS4 190 aa9.88□□□□□ -0.83
CCDC144B-208ENST00000618081 M0R143 59 aa9.87□□□□□ -0.83
CCDC144B-208ENST00000618081 AKR7A2O43488 359 aa9.87□□□□□ -0.83
CCDC144B-208ENST00000618081 RHBDL1O75783 438 aa9.87□□□□□ -0.83
CCDC144B-208ENST00000618081 COX6B1P14854 86 aa9.87□□□□□ -0.83
CCDC144B-208ENST00000618081 COL8A1P27658 744 aa9.87□□□□□ -0.83
CCDC144B-208ENST00000618081 PPP1CCP36873 323 aaKnown RBP9.87□□□□□ -0.83
CCDC144B-208ENST00000618081 TSPAN32Q96QS1 320 aa9.87□□□□□ -0.83
CCDC144B-208ENST00000618081 MS4A7Q9GZW8 240 aaPredicted RBP9.87□□□□□ -0.83
CCDC144B-208ENST00000618081 HELTA6NFD8 242 aa9.87□□□□□ -0.83
CCDC144B-208ENST00000618081 INHBBP09529 407 aa9.87□□□□□ -0.83
CCDC144B-208ENST00000618081 GALNSP34059 522 aa9.87□□□□□ -0.83
CCDC144B-208ENST00000618081 PDCD1Q15116 288 aa9.87□□□□□ -0.83
CCDC144B-208ENST00000618081 SNRNP40Q96DI7 357 aaKnown RBP9.87□□□□□ -0.83
CCDC144B-208ENST00000618081 ZFPL1O95159 310 aa9.87□□□□□ -0.83
CCDC144B-208ENST00000618081 RD3LP0DJH9 198 aa9.87□□□□□ -0.83
CCDC144B-208ENST00000618081 CLDN18P56856 261 aa9.87□□□□□ -0.83
CCDC144B-208ENST00000618081 PNRC1Q12796 327 aaPredicted RBP9.87□□□□□ -0.83
CCDC144B-208ENST00000618081 GLCCI1Q86VQ1 547 aa9.87□□□□□ -0.83
CCDC144B-208ENST00000618081 TREM2Q9NZC2 230 aa9.87□□□□□ -0.83
CCDC144B-208ENST00000618081 M0R3E3 92 aa9.87□□□□□ -0.83
CCDC144B-208ENST00000618081 PDE6DO43924 150 aa9.87□□□□□ -0.83
CCDC144B-208ENST00000618081 HIST1H1BP16401 226 aaKnown RBP9.87□□□□□ -0.83
CCDC144B-208ENST00000618081 GZMHP20718 246 aa9.87□□□□□ -0.83
CCDC144B-208ENST00000618081 LHX8Q68G74 356 aa9.87□□□□□ -0.83
CCDC144B-208ENST00000618081 PIK3IP1Q96FE7 263 aa9.87□□□□□ -0.83
CCDC144B-208ENST00000618081 ZNF768Q9H5H4 540 aaKnown RBP9.87□□□□□ -0.83
CCDC144B-208ENST00000618081 IL21Q9HBE4 155 aa9.87□□□□□ -0.83
CCDC144B-208ENST00000618081 BET1LQ9NYM9 111 aa9.87□□□□□ -0.83
CCDC144B-208ENST00000618081 AUP1Q9Y679 476 aa9.87□□□□□ -0.83
CCDC144B-208ENST00000618081 COL5A3P25940 1745 aaPredicted RBP9.87□□□□□ -0.83
CCDC144B-208ENST00000618081 IGKV3-7A0A075B6H7 116 aa9.87□□□□□ -0.83
CCDC144B-208ENST00000618081 ISLRO14498 428 aa9.87□□□□□ -0.83
CCDC144B-208ENST00000618081 G6PCP35575 357 aa9.87□□□□□ -0.83
CCDC144B-208ENST00000618081 ANKRD55Q3KP44 614 aa9.87□□□□□ -0.83
CCDC144B-208ENST00000618081 PHYHIPLQ96FC7 376 aa9.87□□□□□ -0.83
CCDC144B-208ENST00000618081 MTFP1Q9UDX5 166 aa9.87□□□□□ -0.83
CCDC144B-208ENST00000618081 RABAC1Q9UI14 185 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 156.3 ms