RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 LINC00596Q86U02 117 aa20.23■□□□□ 0.83
PMS1-220ENST00000618056 JAGN1Q8N5M9 183 aa20.23■□□□□ 0.83
PMS1-220ENST00000618056 GAL3ST2Q9H3Q3 398 aa20.23■□□□□ 0.83
PMS1-220ENST00000618056 NCOR1P1Q9H4R4 102 aa20.23■□□□□ 0.83
PMS1-220ENST00000618056 ISYNA1Q9NPH2 558 aa20.23■□□□□ 0.83
PMS1-220ENST00000618056 VPREB3Q9UKI3 123 aa20.23■□□□□ 0.83
PMS1-220ENST00000618056 BLOC1S6Q9UL45 172 aa20.23■□□□□ 0.83
PMS1-220ENST00000618056 SMIM31A0A1B0GVY4 71 aa20.22■□□□□ 0.83
PMS1-220ENST00000618056 BTBD17A6NE02 478 aa20.22■□□□□ 0.83
PMS1-220ENST00000618056 FAM90A8PA6NJQ4 464 aa20.22■□□□□ 0.83
PMS1-220ENST00000618056 GPR137BO60478 399 aa20.22■□□□□ 0.83
PMS1-220ENST00000618056 SC5DO75845 299 aa20.22■□□□□ 0.83
PMS1-220ENST00000618056 TFAP2AP05549 437 aa20.22■□□□□ 0.83
PMS1-220ENST00000618056 KCNJ3P48549 501 aa20.22■□□□□ 0.83
PMS1-220ENST00000618056 GPR176Q14439 515 aa20.22■□□□□ 0.83
PMS1-220ENST00000618056 ATXN7L3Q14CW9 347 aaPredicted RBP20.22■□□□□ 0.83
PMS1-220ENST00000618056 AANATQ16613 207 aa20.22■□□□□ 0.83
PMS1-220ENST00000618056 ZNF626Q68DY1 528 aa20.22■□□□□ 0.83
PMS1-220ENST00000618056 NDUFA13Q9P0J0 144 aa20.22■□□□□ 0.83
PMS1-220ENST00000618056 MEGF11A6BM72 1044 aa20.21■□□□□ 0.83
PMS1-220ENST00000618056 SERPINA2P20848 420 aa20.21■□□□□ 0.83
PMS1-220ENST00000618056 TPBGQ13641 420 aa20.21■□□□□ 0.83
PMS1-220ENST00000618056 INSL4Q14641 139 aa20.21■□□□□ 0.83
PMS1-220ENST00000618056 SLC22A6Q4U2R8 563 aa20.21■□□□□ 0.83
PMS1-220ENST00000618056 UFD1Q92890 307 aa20.21■□□□□ 0.83
PMS1-220ENST00000618056 MUL1Q969V5 352 aa20.21■□□□□ 0.83
PMS1-220ENST00000618056 TMED9Q9BVK6 235 aa20.21■□□□□ 0.83
PMS1-220ENST00000618056 CCDC90BQ9GZT6 254 aa20.21■□□□□ 0.83
PMS1-220ENST00000618056 C1RLQ9NZP8 487 aa20.21■□□□□ 0.83
PMS1-220ENST00000618056 MRPS28Q9Y2Q9 187 aaKnown RBP20.21■□□□□ 0.83
PMS1-220ENST00000618056 TBL2Q9Y4P3 447 aaKnown RBP20.21■□□□□ 0.83
PMS1-220ENST00000618056 MMP24Q9Y5R2 645 aa20.21■□□□□ 0.83
PMS1-220ENST00000618056 TRIM64CA6NLI5 447 aa20.2■□□□□ 0.82
PMS1-220ENST00000618056 HAX1O00165 279 aa20.2■□□□□ 0.82
PMS1-220ENST00000618056 NDUFA7O95182 113 aa20.2■□□□□ 0.82
PMS1-220ENST00000618056 GTF2F2P13984 249 aa20.2■□□□□ 0.82
PMS1-220ENST00000618056 GP2P55259 537 aaKnown RBP20.2■□□□□ 0.82
PMS1-220ENST00000618056 MPV17LQ2QL34 196 aa20.2■□□□□ 0.82
PMS1-220ENST00000618056 LIPKQ5VXJ0 399 aa20.2■□□□□ 0.82
PMS1-220ENST00000618056 HEPN1Q6WQI6 88 aa20.2■□□□□ 0.82
PMS1-220ENST00000618056 GDPGP1Q6ZNW5 385 aa20.2■□□□□ 0.82
PMS1-220ENST00000618056 PHYHIPQ92561 330 aa20.2■□□□□ 0.82
PMS1-220ENST00000618056 TAF15Q92804 592 aaKnown RBP eCLIP20.2■□□□□ 0.82
PMS1-220ENST00000618056 UQCC2Q9BRT2 126 aa20.2■□□□□ 0.82
PMS1-220ENST00000618056 TMEM133Q9H2Q1 129 aa20.2■□□□□ 0.82
PMS1-220ENST00000618056 OR6C3Q9NZP0 311 aa20.2■□□□□ 0.82
PMS1-220ENST00000618056 HSPB6O14558 160 aa20.19■□□□□ 0.82
PMS1-220ENST00000618056 ARG1P05089 322 aa20.19■□□□□ 0.82
PMS1-220ENST00000618056 GABARAPL2P60520 117 aa20.19■□□□□ 0.82
PMS1-220ENST00000618056 RELBQ01201 579 aa20.19■□□□□ 0.82
PMS1-220ENST00000618056 MLLT11Q13015 90 aaPredicted RBP20.19■□□□□ 0.82
PMS1-220ENST00000618056 FOXB2Q5VYV0 432 aa20.19■□□□□ 0.82
PMS1-220ENST00000618056 OR52W1Q6IF63 320 aa20.19■□□□□ 0.82
PMS1-220ENST00000618056 GLIPR1L1Q6UWM5 242 aa20.19■□□□□ 0.82
PMS1-220ENST00000618056 MRPS24Q96EL2 167 aaKnown RBP20.19■□□□□ 0.82
PMS1-220ENST00000618056 SSX3Q99909 188 aa20.19■□□□□ 0.82
PMS1-220ENST00000618056 BARHL1Q9BZE3 327 aa20.19■□□□□ 0.82
PMS1-220ENST00000618056 PPIL3Q9H2H8 161 aaKnown RBP20.19■□□□□ 0.82
PMS1-220ENST00000618056 IGHV2-26A0A0B4J1V2 119 aa20.18■□□□□ 0.82
PMS1-220ENST00000618056 A0A1B0GUS0 222 aa20.18■□□□□ 0.82
PMS1-220ENST00000618056 POM121CA8CG34 1229 aa20.18■□□□□ 0.82
PMS1-220ENST00000618056 GEMIN2O14893 280 aaKnown RBP20.18■□□□□ 0.82
PMS1-220ENST00000618056 MMP23AO75900 390 aa20.18■□□□□ 0.82
PMS1-220ENST00000618056 OR7C1O76099 320 aaPredicted RBP20.18■□□□□ 0.82
PMS1-220ENST00000618056 LRRC75BQ2VPJ9 315 aa20.18■□□□□ 0.82
PMS1-220ENST00000618056 FAM27D1Q5T7N8 215 aa20.18■□□□□ 0.82
PMS1-220ENST00000618056 LHFPL4Q7Z7J7 247 aa20.18■□□□□ 0.82
PMS1-220ENST00000618056 OR4D6Q8NGJ1 314 aa20.18■□□□□ 0.82
PMS1-220ENST00000618056 OR4F5Q8NH21 305 aa20.18■□□□□ 0.82
PMS1-220ENST00000618056 FOXRED1Q96CU9 486 aaPredicted RBP20.18■□□□□ 0.82
PMS1-220ENST00000618056 ZNF747Q9BV97 191 aa20.18■□□□□ 0.82
PMS1-220ENST00000618056 A0A1W2PP11 408 aa20.18■□□□□ 0.82
PMS1-220ENST00000618056 ZNF729A6NN14 1252 aaPredicted RBP20.18■□□□□ 0.82
PMS1-220ENST00000618056 H3BUX3 64 aa20.18■□□□□ 0.82
PMS1-220ENST00000618056 UCHL1P09936 223 aa20.18■□□□□ 0.82
PMS1-220ENST00000618056 HSMCR30P0CW71 290 aa20.18■□□□□ 0.82
PMS1-220ENST00000618056 CPEP16870 476 aa20.18■□□□□ 0.82
PMS1-220ENST00000618056 OMGP23515 440 aa20.18■□□□□ 0.82
PMS1-220ENST00000618056 CDK2P24941 298 aa20.18■□□□□ 0.82
PMS1-220ENST00000618056 RAG2P55895 527 aa20.18■□□□□ 0.82
PMS1-220ENST00000618056 TBCEQ15813 527 aaPredicted RBP20.18■□□□□ 0.82
PMS1-220ENST00000618056 RSBN1Q5VWQ0 802 aaPredicted RBP20.18■□□□□ 0.82
PMS1-220ENST00000618056 AWAT2Q6E213 333 aa20.18■□□□□ 0.82
PMS1-220ENST00000618056 ZNF773Q6PK81 442 aa20.18■□□□□ 0.82
PMS1-220ENST00000618056 SUMF2Q8NBJ7 301 aa20.18■□□□□ 0.82
PMS1-220ENST00000618056 MALSU1Q96EH3 234 aa20.18■□□□□ 0.82
PMS1-220ENST00000618056 DPCDQ9BVM2 203 aaPredicted RBP20.18■□□□□ 0.82
PMS1-220ENST00000618056 CLEC7AQ9BXN2 247 aa20.18■□□□□ 0.82
PMS1-220ENST00000618056 TCF7L1Q9HCS4 588 aa20.18■□□□□ 0.82
PMS1-220ENST00000618056 ING3Q9NXR8 418 aa20.18■□□□□ 0.82
PMS1-220ENST00000618056 ZNF581Q9P0T4 197 aa20.18■□□□□ 0.82
PMS1-220ENST00000618056 KIF25Q9UIL4 384 aa20.18■□□□□ 0.82
PMS1-220ENST00000618056 VGLL3A8MV65 326 aa20.17■□□□□ 0.82
PMS1-220ENST00000618056 CGB3P0DN86 165 aa20.17■□□□□ 0.82
PMS1-220ENST00000618056 CGB7P0DN87 165 aa20.17■□□□□ 0.82
PMS1-220ENST00000618056 MDKP21741 143 aaPredicted RBP20.17■□□□□ 0.82
PMS1-220ENST00000618056 ALDH3B2P48448 385 aa20.17■□□□□ 0.82
PMS1-220ENST00000618056 TRAM1Q15629 374 aa20.17■□□□□ 0.82
PMS1-220ENST00000618056 PRAMEF5Q5TYX0 476 aa20.17■□□□□ 0.82
PMS1-220ENST00000618056 CEACAM19Q7Z692 300 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms