RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 CNIH2Q6PI25 160 aa12.2□□□□□ -0.46
CD48-203ENST00000613788 OR4M1Q8NGD0 313 aa12.2□□□□□ -0.46
CD48-203ENST00000613788 OR6Q1Q8NGQ2 317 aa12.2□□□□□ -0.46
CD48-203ENST00000613788 C15orf40Q8WUR7 153 aa12.2□□□□□ -0.46
CD48-203ENST00000613788 H1FXQ92522 213 aaKnown RBP12.2□□□□□ -0.46
CD48-203ENST00000613788 ZMAT3Q9HA38 289 aaKnown RBP12.2□□□□□ -0.46
CD48-203ENST00000613788 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.2□□□□□ -0.46
CD48-203ENST00000613788 RABL2AQ9UBK7 228 aaPredicted RBP12.2□□□□□ -0.46
CD48-203ENST00000613788 RABL2BQ9UNT1 228 aa12.2□□□□□ -0.46
CD48-203ENST00000613788 MFNGO00587 321 aa12.19□□□□□ -0.46
CD48-203ENST00000613788 PHF1O43189 567 aaPredicted RBP12.19□□□□□ -0.46
CD48-203ENST00000613788 TAS2R20P59543 309 aa12.19□□□□□ -0.46
CD48-203ENST00000613788 PAX5Q02548 391 aa12.19□□□□□ -0.46
CD48-203ENST00000613788 AESQ08117 197 aa12.19□□□□□ -0.46
CD48-203ENST00000613788 PNLIPRP3Q17RR3 467 aa12.19□□□□□ -0.46
CD48-203ENST00000613788 ZNF260Q3ZCT1 412 aa12.19□□□□□ -0.46
CD48-203ENST00000613788 BAIAP2L2Q6UXY1 529 aa12.19□□□□□ -0.46
CD48-203ENST00000613788 LINC00299Q6ZSB3 139 aa12.19□□□□□ -0.46
CD48-203ENST00000613788 DTX3Q8N9I9 347 aa12.19□□□□□ -0.46
CD48-203ENST00000613788 RIMS4Q9H426 269 aaPredicted RBP12.19□□□□□ -0.46
CD48-203ENST00000613788 NCOR1P1Q9H4R4 102 aa12.19□□□□□ -0.46
CD48-203ENST00000613788 LPAR3Q9UBY5 353 aa12.19□□□□□ -0.46
CD48-203ENST00000613788 MRPS7Q9Y2R9 242 aaKnown RBP12.19□□□□□ -0.46
CD48-203ENST00000613788 KCNK7Q9Y2U2 307 aa12.19□□□□□ -0.46
CD48-203ENST00000613788 PRRC2AP48634 2157 aaKnown RBP12.18□□□□□ -0.46
CD48-203ENST00000613788 LOC105371242A0A075B767 164 aa12.18□□□□□ -0.46
CD48-203ENST00000613788 TRBV23-1A0A0A0MS06 115 aa12.18□□□□□ -0.46
CD48-203ENST00000613788 TMEM30CPA0ZSE6 113 aa12.18□□□□□ -0.46
CD48-203ENST00000613788 A8MXK9 166 aa12.18□□□□□ -0.46
CD48-203ENST00000613788 FCN3O75636 299 aa12.18□□□□□ -0.46
CD48-203ENST00000613788 MELTFP08582 738 aa12.18□□□□□ -0.46
CD48-203ENST00000613788 CD3GP09693 182 aa12.18□□□□□ -0.46
CD48-203ENST00000613788 IL2RGP31785 369 aa12.18□□□□□ -0.46
CD48-203ENST00000613788 P2RX3P56373 397 aa12.18□□□□□ -0.46
CD48-203ENST00000613788 RPL31P62899 125 aaKnown RBP12.18□□□□□ -0.46
CD48-203ENST00000613788 PITPNAQ00169 270 aa12.18□□□□□ -0.46
CD48-203ENST00000613788 MEF2CQ06413 473 aaPredicted RBP12.18□□□□□ -0.46
CD48-203ENST00000613788 ARFRP1Q13795 201 aa12.18□□□□□ -0.46
CD48-203ENST00000613788 HACD4Q5VWC8 232 aa12.18□□□□□ -0.46
CD48-203ENST00000613788 ZNF497Q6ZNH5 498 aa12.18□□□□□ -0.46
CD48-203ENST00000613788 BTN2A1Q7KYR7 527 aa12.18□□□□□ -0.46
CD48-203ENST00000613788 IZUMO1Q8IYV9 350 aa12.18□□□□□ -0.46
CD48-203ENST00000613788 FGFRL1Q8N441 504 aa12.18□□□□□ -0.46
CD48-203ENST00000613788 PLPPR1Q8TBJ4 325 aa12.18□□□□□ -0.46
CD48-203ENST00000613788 COQ2Q96H96 371 aa12.18□□□□□ -0.46
CD48-203ENST00000613788 CMSS1Q9BQ75 279 aaKnown RBP12.18□□□□□ -0.46
CD48-203ENST00000613788 DCTN5Q9BTE1 182 aa12.18□□□□□ -0.46
CD48-203ENST00000613788 AUNIPQ9H7T9 357 aa12.18□□□□□ -0.46
CD48-203ENST00000613788 ING3Q9NXR8 418 aa12.18□□□□□ -0.46
CD48-203ENST00000613788 AK3Q9UIJ7 227 aa12.18□□□□□ -0.46
CD48-203ENST00000613788 MEIKINA0A087WXM9 373 aa12.17□□□□□ -0.46
CD48-203ENST00000613788 hADV38S2A0JD32 116 aa12.17□□□□□ -0.46
CD48-203ENST00000613788 FABP12A6NFH5 140 aa12.17□□□□□ -0.46
CD48-203ENST00000613788 POM121CA8CG34 1229 aa12.17□□□□□ -0.46
CD48-203ENST00000613788 B4DSR2 109 aa12.17□□□□□ -0.46
CD48-203ENST00000613788 MT-ND4P03905 459 aa12.17□□□□□ -0.46
CD48-203ENST00000613788 GLIPR1P48060 266 aa12.17□□□□□ -0.46
CD48-203ENST00000613788 SPANXN2Q5MJ10 180 aa12.17□□□□□ -0.46
CD48-203ENST00000613788 RSBN1Q5VWQ0 802 aaPredicted RBP12.17□□□□□ -0.46
CD48-203ENST00000613788 C1orf159Q96HA4 380 aa12.17□□□□□ -0.46
CD48-203ENST00000613788 CHMP1AQ9HD42 196 aaPredicted RBP12.17□□□□□ -0.46
CD48-203ENST00000613788 OR6C3Q9NZP0 311 aa12.17□□□□□ -0.46
CD48-203ENST00000613788 KIF25Q9UIL4 384 aa12.17□□□□□ -0.46
CD48-203ENST00000613788 POLR3KQ9Y2Y1 108 aaPredicted RBP12.17□□□□□ -0.46
CD48-203ENST00000613788 CSMD1Q96PZ7 3565 aa12.17□□□□□ -0.46
CD48-203ENST00000613788 VPS13CQ709C8 3753 aa12.17□□□□□ -0.46
CD48-203ENST00000613788 NOTCH2Q04721 2471 aa12.17□□□□□ -0.46
CD48-203ENST00000613788 A0A1W2PPH5 198 aa12.16□□□□□ -0.46
CD48-203ENST00000613788 ODAMA1E959 279 aa12.16□□□□□ -0.46
CD48-203ENST00000613788 TMEM235A6NFC5 223 aa12.16□□□□□ -0.46
CD48-203ENST00000613788 FAM157AC9JC47 383 aa12.16□□□□□ -0.46
CD48-203ENST00000613788 HLA-DQB1P01920 261 aa12.16□□□□□ -0.46
CD48-203ENST00000613788 ZFP36P26651 326 aaKnown RBP12.16□□□□□ -0.46
CD48-203ENST00000613788 GZMKP49863 264 aa12.16□□□□□ -0.46
CD48-203ENST00000613788 GNG2P59768 71 aa12.16□□□□□ -0.46
CD48-203ENST00000613788 LCN2P80188 198 aa12.16□□□□□ -0.46
CD48-203ENST00000613788 IL18Q14116 193 aa12.16□□□□□ -0.46
CD48-203ENST00000613788 OLFML2AQ68BL7 652 aa12.16□□□□□ -0.46
CD48-203ENST00000613788 PYHIN1Q6K0P9 492 aa12.16□□□□□ -0.46
CD48-203ENST00000613788 CCDC190Q86UF4 302 aa12.16□□□□□ -0.46
CD48-203ENST00000613788 RTN4RL2Q86UN3 420 aa12.16□□□□□ -0.46
CD48-203ENST00000613788 GAPTQ8N292 157 aa12.16□□□□□ -0.46
CD48-203ENST00000613788 TPRX1Q8N7U7 411 aa12.16□□□□□ -0.46
CD48-203ENST00000613788 ZNF565Q8N9K5 539 aa12.16□□□□□ -0.46
CD48-203ENST00000613788 DMRTB1Q96MA1 342 aa12.16□□□□□ -0.46
CD48-203ENST00000613788 C12orf4Q9NQ89 552 aa12.16□□□□□ -0.46
CD48-203ENST00000613788 RPUSD1Q9UJJ7 312 aaKnown RBP12.16□□□□□ -0.46
CD48-203ENST00000613788 TRGV10A0A0A0MS01 117 aa12.16□□□□□ -0.46
CD48-203ENST00000613788 A0A1W2PQ09 198 aa12.16□□□□□ -0.46
CD48-203ENST00000613788 KIAA1324LA8MWY0 1029 aaPredicted RBP12.16□□□□□ -0.46
CD48-203ENST00000613788 LIPFP07098 398 aa12.16□□□□□ -0.46
CD48-203ENST00000613788 PRSS3P35030 304 aa12.16□□□□□ -0.46
CD48-203ENST00000613788 TMEM249Q2WGJ8 235 aa12.16□□□□□ -0.46
CD48-203ENST00000613788 FAM131AQ6UXB0 335 aa12.16□□□□□ -0.46
CD48-203ENST00000613788 SNX29P2Q8IUI4 249 aa12.16□□□□□ -0.46
CD48-203ENST00000613788 LINC01356Q8N9X3 169 aa12.16□□□□□ -0.46
CD48-203ENST00000613788 MAPK1IP1LQ8NDC0 245 aa12.16□□□□□ -0.46
CD48-203ENST00000613788 C8orf46Q8TAG6 207 aa12.16□□□□□ -0.46
CD48-203ENST00000613788 DYRK2Q92630 601 aa12.16□□□□□ -0.46
CD48-203ENST00000613788 TRAPPC2LQ9UL33 140 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms