RNA–Protein interactions for RNA: ENST00000613122.4

CTDP1-208, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTDP1, Length 5,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-208ENST00000613122 TRBV23-1A0A0A0MS06 115 aa17.67■□□□□ 0.42
CTDP1-208ENST00000613122 CA11O75493 328 aa17.67■□□□□ 0.42
CTDP1-208ENST00000613122 SPNP16150 400 aa17.67■□□□□ 0.42
CTDP1-208ENST00000613122 GZMKP49863 264 aa17.67■□□□□ 0.42
CTDP1-208ENST00000613122 RPS4XP62701 263 aaKnown RBP17.67■□□□□ 0.42
CTDP1-208ENST00000613122 KCNMB1Q16558 191 aa17.67■□□□□ 0.42
CTDP1-208ENST00000613122 TEX29Q8N6K0 151 aa17.67■□□□□ 0.42
CTDP1-208ENST00000613122 LOC102723971A0A1B0GUV8 181 aa17.66■□□□□ 0.42
CTDP1-208ENST00000613122 TCAPO15273 167 aa17.66■□□□□ 0.42
CTDP1-208ENST00000613122 ECSCRQ19T08 205 aa17.66■□□□□ 0.42
CTDP1-208ENST00000613122 FAHD2BQ6P2I3 314 aaPredicted RBP17.66■□□□□ 0.42
CTDP1-208ENST00000613122 DUSP18Q8NEJ0 188 aa17.66■□□□□ 0.42
CTDP1-208ENST00000613122 FAHD2AQ96GK7 314 aa17.66■□□□□ 0.42
CTDP1-208ENST00000613122 ABHD14AQ9BUJ0 271 aa17.66■□□□□ 0.42
CTDP1-208ENST00000613122 PRNDQ9UKY0 176 aa17.66■□□□□ 0.42
CTDP1-208ENST00000613122 WIPI2Q9Y4P8 454 aa17.66■□□□□ 0.42
CTDP1-208ENST00000613122 RPL31P62899 125 aaKnown RBP17.66■□□□□ 0.42
CTDP1-208ENST00000613122 OR1L1Q8NH94 360 aa17.66■□□□□ 0.42
CTDP1-208ENST00000613122 Q8WTZ3 238 aa17.66■□□□□ 0.42
CTDP1-208ENST00000613122 TMPRSS5Q9H3S3 457 aa17.66■□□□□ 0.42
CTDP1-208ENST00000613122 COL5A3P25940 1745 aaPredicted RBP17.66■□□□□ 0.42
CTDP1-208ENST00000613122 C19orf48Q6RUI8 117 aa17.66■□□□□ 0.42
CTDP1-208ENST00000613122 TCTE3Q8IZS6 198 aa17.66■□□□□ 0.42
CTDP1-208ENST00000613122 ZNF680Q8NEM1 530 aa17.66■□□□□ 0.42
CTDP1-208ENST00000613122 SLC26A10Q8NG04 563 aa17.66■□□□□ 0.42
CTDP1-208ENST00000613122 ARG1P05089 322 aa17.66■□□□□ 0.42
CTDP1-208ENST00000613122 ERVFRD-1P60508 538 aa17.66■□□□□ 0.42
CTDP1-208ENST00000613122 TGIF1Q15583 401 aa17.66■□□□□ 0.42
CTDP1-208ENST00000613122 PDPNQ86YL7 162 aa17.66■□□□□ 0.42
CTDP1-208ENST00000613122 RNF122Q9H9V4 155 aa17.66■□□□□ 0.42
CTDP1-208ENST00000613122 IGKV1D-16P01601 117 aa17.65■□□□□ 0.42
CTDP1-208ENST00000613122 SURF2Q15527 256 aaPredicted RBP17.65■□□□□ 0.42
CTDP1-208ENST00000613122 MMDQ15546 238 aa17.65■□□□□ 0.42
CTDP1-208ENST00000613122 CHST5Q9GZS9 411 aa17.65■□□□□ 0.42
CTDP1-208ENST00000613122 PILRAQ9UKJ1 303 aa17.65■□□□□ 0.42
CTDP1-208ENST00000613122 ANKRD20A5PA0PJZ0 165 aa17.65■□□□□ 0.42
CTDP1-208ENST00000613122 MMP7P09237 267 aaPredicted RBP17.65■□□□□ 0.42
CTDP1-208ENST00000613122 CTSSP25774 331 aa17.65■□□□□ 0.42
CTDP1-208ENST00000613122 COL10A1Q03692 680 aa17.65■□□□□ 0.42
CTDP1-208ENST00000613122 ZP4Q12836 540 aa17.65■□□□□ 0.42
CTDP1-208ENST00000613122 UBE2L3P68036 154 aaKnown RBP17.65■□□□□ 0.42
CTDP1-208ENST00000613122 SLC2A8Q9NY64 477 aa17.65■□□□□ 0.42
CTDP1-208ENST00000613122 TRIP11Q15643 1979 aa17.65■□□□□ 0.42
CTDP1-208ENST00000613122 AESQ08117 197 aa17.65■□□□□ 0.42
CTDP1-208ENST00000613122 PIGYQ3MUY2 71 aa17.65■□□□□ 0.42
CTDP1-208ENST00000613122 GAPTQ8N292 157 aa17.65■□□□□ 0.42
CTDP1-208ENST00000613122 ZBTB44Q8NCP5 570 aa17.65■□□□□ 0.42
CTDP1-208ENST00000613122 RPS4Y2Q8TD47 263 aa17.65■□□□□ 0.42
CTDP1-208ENST00000613122 C2CD4CQ8TF44 421 aa17.65■□□□□ 0.42
CTDP1-208ENST00000613122 QSER1Q2KHR3 1735 aa17.65■□□□□ 0.42
CTDP1-208ENST00000613122 CROCCQ5TZA2 2017 aa17.65■□□□□ 0.42
CTDP1-208ENST00000613122 UCP2P55851 309 aa17.65■□□□□ 0.42
CTDP1-208ENST00000613122 PAFAH1B2P68402 229 aa17.65■□□□□ 0.42
CTDP1-208ENST00000613122 GUK1Q16774 197 aa17.65■□□□□ 0.42
CTDP1-208ENST00000613122 SF3B6Q9Y3B4 125 aaKnown RBP17.65■□□□□ 0.42
CTDP1-208ENST00000613122 GYPAP02724 150 aa17.64■□□□□ 0.42
CTDP1-208ENST00000613122 ST3GAL2Q16842 350 aa17.64■□□□□ 0.42
CTDP1-208ENST00000613122 NOL4LQ96MY1 436 aaPredicted RBP17.64■□□□□ 0.42
CTDP1-208ENST00000613122 ASCL3Q9NQ33 180 aa17.64■□□□□ 0.42
CTDP1-208ENST00000613122 ACAA2P42765 397 aaKnown RBP17.64■□□□□ 0.41
CTDP1-208ENST00000613122 ZCCHC14Q8WYQ9 949 aaKnown RBP17.64■□□□□ 0.41
CTDP1-208ENST00000613122 SYNGR2O43760 224 aa17.64■□□□□ 0.41
CTDP1-208ENST00000613122 MVDP53602 400 aa17.64■□□□□ 0.41
CTDP1-208ENST00000613122 FOXB2Q5VYV0 432 aa17.64■□□□□ 0.41
CTDP1-208ENST00000613122 NFAM1Q8NET5 270 aaPredicted RBP17.64■□□□□ 0.41
CTDP1-208ENST00000613122 CISD1Q9NZ45 108 aaKnown RBP17.64■□□□□ 0.41
CTDP1-208ENST00000613122 ZNF737O75373 536 aa17.64■□□□□ 0.41
CTDP1-208ENST00000613122 RAB5AP20339 215 aa17.64■□□□□ 0.41
CTDP1-208ENST00000613122 PRDX2P32119 198 aa17.64■□□□□ 0.41
CTDP1-208ENST00000613122 HOXA4Q00056 320 aaPredicted RBP17.64■□□□□ 0.41
CTDP1-208ENST00000613122 IL24Q13007 206 aa17.64■□□□□ 0.41
CTDP1-208ENST00000613122 EIF4EBP2Q13542 120 aaPredicted RBP17.64■□□□□ 0.41
CTDP1-208ENST00000613122 WNT2BQ93097 391 aa17.64■□□□□ 0.41
CTDP1-208ENST00000613122 TGIF2Q9GZN2 237 aa17.64■□□□□ 0.41
CTDP1-208ENST00000613122 PCDHGA9Q9Y5G4 932 aaKnown RBP17.64■□□□□ 0.41
CTDP1-208ENST00000613122 IGKV3-7A0A075B6H7 116 aa17.64■□□□□ 0.41
CTDP1-208ENST00000613122 RNASEK-C17orf49H0YIS7 233 aa17.64■□□□□ 0.41
CTDP1-208ENST00000613122 ZNF596Q8TC21 504 aa17.64■□□□□ 0.41
CTDP1-208ENST00000613122 DTD1Q8TEA8 209 aa17.64■□□□□ 0.41
CTDP1-208ENST00000613122 KIAA1217Q5T5P2 1943 aa17.63■□□□□ 0.41
CTDP1-208ENST00000613122 ZNF658BQ4V348 819 aaPredicted RBP17.63■□□□□ 0.41
CTDP1-208ENST00000613122 FAM27BQ5VT28 67 aa17.63■□□□□ 0.41
CTDP1-208ENST00000613122 CCL28Q9NRJ3 127 aa17.63■□□□□ 0.41
CTDP1-208ENST00000613122 GSTZ1O43708 216 aaPredicted RBP17.63■□□□□ 0.41
CTDP1-208ENST00000613122 GATCO43716 136 aaKnown RBP17.63■□□□□ 0.41
CTDP1-208ENST00000613122 HSBP1O75506 76 aa17.63■□□□□ 0.41
CTDP1-208ENST00000613122 POLR2GP62487 172 aaKnown RBP eCLIP17.63■□□□□ 0.41
CTDP1-208ENST00000613122 FHL5Q5TD97 284 aa17.63■□□□□ 0.41
CTDP1-208ENST00000613122 PRSS54Q6PEW0 395 aa17.63■□□□□ 0.41
CTDP1-208ENST00000613122 OR4D10Q8NGI6 311 aa17.63■□□□□ 0.41
CTDP1-208ENST00000613122 ZNF638Q14966 1978 aaKnown RBP17.63■□□□□ 0.41
CTDP1-208ENST00000613122 PRR19A6NJB7 356 aa17.63■□□□□ 0.41
CTDP1-208ENST00000613122 RPL36A-HNRNPH2H7BZ11 118 aa17.63■□□□□ 0.41
CTDP1-208ENST00000613122 PPYP01298 95 aa17.63■□□□□ 0.41
CTDP1-208ENST00000613122 OR4A4PQ8NGN8 299 aa17.63■□□□□ 0.41
CTDP1-208ENST00000613122 TECRQ9NZ01 308 aaKnown RBP17.63■□□□□ 0.41
CTDP1-208ENST00000613122 OR4C45A6NMZ5 311 aa17.63■□□□□ 0.41
CTDP1-208ENST00000613122 ALX3O95076 343 aa17.63■□□□□ 0.41
CTDP1-208ENST00000613122 MPC2O95563 127 aa17.63■□□□□ 0.41
CTDP1-208ENST00000613122 INHBBP09529 407 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms