RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 TLNRD1Q9H1K6 362 aa7.81□□□□□ -1.16
TTC28-208ENST00000612946 B9D1Q9UPM9 204 aa7.81□□□□□ -1.16
TTC28-208ENST00000612946 PMS2P1A4D2B8 440 aa7.81□□□□□ -1.16
TTC28-208ENST00000612946 RAB29O14966 203 aa7.81□□□□□ -1.16
TTC28-208ENST00000612946 SYNGR2O43760 224 aa7.81□□□□□ -1.16
TTC28-208ENST00000612946 LEPROTL1O95214 131 aa7.81□□□□□ -1.16
TTC28-208ENST00000612946 YPEL5P62699 121 aa7.81□□□□□ -1.16
TTC28-208ENST00000612946 DCDP81605 110 aaKnown RBP7.81□□□□□ -1.16
TTC28-208ENST00000612946 APOBEC3DQ96AK3 386 aaPredicted RBP7.81□□□□□ -1.16
TTC28-208ENST00000612946 C5orf30Q96GV9 206 aa7.81□□□□□ -1.16
TTC28-208ENST00000612946 MRPL37Q9BZE1 423 aaKnown RBP7.81□□□□□ -1.16
TTC28-208ENST00000612946 VN1R1Q9GZP7 353 aa7.81□□□□□ -1.16
TTC28-208ENST00000612946 GDE1Q9NZC3 331 aa7.81□□□□□ -1.16
TTC28-208ENST00000612946 USF3Q68DE3 2245 aa7.81□□□□□ -1.16
TTC28-208ENST00000612946 CNIH1O95406 144 aa7.81□□□□□ -1.16
TTC28-208ENST00000612946 NPY1RP25929 384 aa7.81□□□□□ -1.16
TTC28-208ENST00000612946 PPICP45877 212 aa7.81□□□□□ -1.16
TTC28-208ENST00000612946 RNF175Q8N4F7 328 aa7.81□□□□□ -1.16
TTC28-208ENST00000612946 UBE2L3P68036 154 aaKnown RBP7.81□□□□□ -1.16
TTC28-208ENST00000612946 ZFAND6Q6FIF0 208 aa7.81□□□□□ -1.16
TTC28-208ENST00000612946 SIGLEC11Q96RL6 698 aa7.81□□□□□ -1.16
TTC28-208ENST00000612946 ST20Q9HBF5 79 aa7.81□□□□□ -1.16
TTC28-208ENST00000612946 COA3Q9Y2R0 106 aaPredicted RBP7.81□□□□□ -1.16
TTC28-208ENST00000612946 GPR3P46089 330 aa7.81□□□□□ -1.16
TTC28-208ENST00000612946 LIM2P55344 173 aa7.81□□□□□ -1.16
TTC28-208ENST00000612946 PMP22Q01453 160 aa7.81□□□□□ -1.16
TTC28-208ENST00000612946 FZD5Q13467 585 aa7.81□□□□□ -1.16
TTC28-208ENST00000612946 KCNS1Q96KK3 526 aa7.81□□□□□ -1.16
TTC28-208ENST00000612946 DPRXA6NFQ7 191 aa7.81□□□□□ -1.16
TTC28-208ENST00000612946 GLULP15104 373 aa7.81□□□□□ -1.16
TTC28-208ENST00000612946 FSTP19883 344 aa7.81□□□□□ -1.16
TTC28-208ENST00000612946 P2RY4P51582 365 aa7.81□□□□□ -1.16
TTC28-208ENST00000612946 ZNF770Q6IQ21 691 aaPredicted RBP7.81□□□□□ -1.16
TTC28-208ENST00000612946 RHBDD1Q8TEB9 315 aa7.81□□□□□ -1.16
TTC28-208ENST00000612946 LRP12Q9Y561 859 aa7.81□□□□□ -1.16
TTC28-208ENST00000612946 SDK2Q58EX2 2172 aa7.81□□□□□ -1.16
TTC28-208ENST00000612946 M0R3E3 92 aa7.8□□□□□ -1.16
TTC28-208ENST00000612946 VSTM2AQ8TAG5 236 aa7.8□□□□□ -1.16
TTC28-208ENST00000612946 MUCL1Q96DR8 90 aa7.8□□□□□ -1.16
TTC28-208ENST00000612946 AUP1Q9Y679 476 aa7.8□□□□□ -1.16
TTC28-208ENST00000612946 TNRC6AQ8NDV7 1962 aaKnown RBP7.8□□□□□ -1.16
TTC28-208ENST00000612946 STRCP1A6NGW2 1772 aa7.8□□□□□ -1.16
TTC28-208ENST00000612946 SLC25A5P05141 298 aaKnown RBP7.8□□□□□ -1.16
TTC28-208ENST00000612946 SOX4Q06945 474 aaPredicted RBP7.8□□□□□ -1.16
TTC28-208ENST00000612946 FBLN7Q53RD9 439 aa7.8□□□□□ -1.16
TTC28-208ENST00000612946 C2orf27AQ580R0 203 aa7.8□□□□□ -1.16
TTC28-208ENST00000612946 ACER2Q5QJU3 275 aa7.8□□□□□ -1.16
TTC28-208ENST00000612946 KMT5CQ86Y97 462 aa7.8□□□□□ -1.16
TTC28-208ENST00000612946 TMEM242Q9NWH2 141 aa7.8□□□□□ -1.16
TTC28-208ENST00000612946 ADAMTS5Q9UNA0 930 aa7.8□□□□□ -1.16
TTC28-208ENST00000612946 LANCL1O43813 399 aa7.8□□□□□ -1.16
TTC28-208ENST00000612946 LSM11P83369 360 aaKnown RBP eCLIP7.8□□□□□ -1.16
TTC28-208ENST00000612946 DPTQ07507 201 aa7.8□□□□□ -1.16
TTC28-208ENST00000612946 METTL27Q8N6F8 245 aaPredicted RBP7.8□□□□□ -1.16
TTC28-208ENST00000612946 OR8A1Q8NGG7 326 aa7.8□□□□□ -1.16
TTC28-208ENST00000612946 OR10X1Q8NGY0 326 aa7.8□□□□□ -1.16
TTC28-208ENST00000612946 ARHGAP5-AS1Q96IT6 56 aa7.8□□□□□ -1.16
TTC28-208ENST00000612946 C1QTNF6Q9BXI9 259 aa7.8□□□□□ -1.16
TTC28-208ENST00000612946 A0A1W2PP55 124 aa7.8□□□□□ -1.16
TTC28-208ENST00000612946 CD22P20273 847 aa7.8□□□□□ -1.16
TTC28-208ENST00000612946 CD70P32970 193 aa7.8□□□□□ -1.16
TTC28-208ENST00000612946 RPS11P62280 158 aaKnown RBP eCLIP7.8□□□□□ -1.16
TTC28-208ENST00000612946 SCD5Q86SK9 330 aa7.8□□□□□ -1.16
TTC28-208ENST00000612946 VASH2Q86V25 355 aa7.8□□□□□ -1.16
TTC28-208ENST00000612946 GMLQ99445 158 aa7.8□□□□□ -1.16
TTC28-208ENST00000612946 TRBV5-4A0A0C4DH59 114 aa7.8□□□□□ -1.16
TTC28-208ENST00000612946 CTAG1AP78358 180 aa7.8□□□□□ -1.16
TTC28-208ENST00000612946 TMEM255AQ5JRV8 349 aa7.8□□□□□ -1.16
TTC28-208ENST00000612946 SPRYD7Q5W111 196 aa7.8□□□□□ -1.16
TTC28-208ENST00000612946 CALHM1Q8IU99 346 aa7.8□□□□□ -1.16
TTC28-208ENST00000612946 MGST2Q99735 147 aa7.8□□□□□ -1.16
TTC28-208ENST00000612946 ERGP11308 486 aa7.8□□□□□ -1.16
TTC28-208ENST00000612946 PIAS2O75928 621 aa7.8□□□□□ -1.16
TTC28-208ENST00000612946 OR11G2Q8NGC1 345 aa7.8□□□□□ -1.16
TTC28-208ENST00000612946 LPAR5Q9H1C0 372 aa7.8□□□□□ -1.16
TTC28-208ENST00000612946 ELOVL5Q9NYP7 299 aa7.8□□□□□ -1.16
TTC28-208ENST00000612946 NPTNQ9Y639 398 aa7.8□□□□□ -1.16
TTC28-208ENST00000612946 PLCE1Q9P212 2302 aa7.8□□□□□ -1.16
TTC28-208ENST00000612946 STRCQ7RTU9 1775 aa7.8□□□□□ -1.16
TTC28-208ENST00000612946 A0A087WUJ7 227 aa7.8□□□□□ -1.16
TTC28-208ENST00000612946 SOCS7O14512 581 aa7.8□□□□□ -1.16
TTC28-208ENST00000612946 RCC1P18754 421 aaPredicted RBP7.8□□□□□ -1.16
TTC28-208ENST00000612946 OPRM1P35372 400 aa7.8□□□□□ -1.16
TTC28-208ENST00000612946 KLF16Q9BXK1 252 aaPredicted RBP7.8□□□□□ -1.16
TTC28-208ENST00000612946 ROS1P08922 2347 aa7.8□□□□□ -1.16
TTC28-208ENST00000612946 PTPRDP23468 1912 aa7.8□□□□□ -1.16
TTC28-208ENST00000612946 PPP1R17O96001 155 aa7.8□□□□□ -1.16
TTC28-208ENST00000612946 HKR1P10072 659 aa7.8□□□□□ -1.16
TTC28-208ENST00000612946 GAB4Q2WGN9 574 aa7.8□□□□□ -1.16
TTC28-208ENST00000612946 FAM27D1Q5T7N8 215 aa7.8□□□□□ -1.16
TTC28-208ENST00000612946 HIST1H4GQ99525 98 aa7.8□□□□□ -1.16
TTC28-208ENST00000612946 TXNRD2Q9NNW7 524 aa7.8□□□□□ -1.16
TTC28-208ENST00000612946 ABCA4P78363 2273 aa7.8□□□□□ -1.16
TTC28-208ENST00000612946 GREB1Q4ZG55 1949 aa7.8□□□□□ -1.16
TTC28-208ENST00000612946 LINC00869P0C866 280 aa7.79□□□□□ -1.16
TTC28-208ENST00000612946 ZNF121P58317 390 aaPredicted RBP7.79□□□□□ -1.16
TTC28-208ENST00000612946 IFITM3Q01628 133 aa7.79□□□□□ -1.16
TTC28-208ENST00000612946 A0A1W2PPC4 97 aa7.79□□□□□ -1.16
TTC28-208ENST00000612946 PRSS38A1L453 326 aa7.79□□□□□ -1.16
TTC28-208ENST00000612946 MARCH11A6NNE9 402 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms