RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 GTF3AQ92664 365 aaKnown RBP9.48□□□□□ -0.89
FAM3A-221ENST00000612856 PKD1L2Q7Z442 2459 aa9.47□□□□□ -0.89
FAM3A-221ENST00000612856 PPIHO43447 177 aaKnown RBP9.47□□□□□ -0.89
FAM3A-221ENST00000612856 XRCC2O43543 280 aa9.47□□□□□ -0.89
FAM3A-221ENST00000612856 CSRP1P21291 193 aaKnown RBP9.47□□□□□ -0.89
FAM3A-221ENST00000612856 FHITP49789 147 aa9.47□□□□□ -0.89
FAM3A-221ENST00000612856 KHDC1LQ5JSQ8 128 aa9.47□□□□□ -0.89
FAM3A-221ENST00000612856 FHL5Q5TD97 284 aa9.47□□□□□ -0.89
FAM3A-221ENST00000612856 TMEM182Q6ZP80 229 aaPredicted RBP9.47□□□□□ -0.89
FAM3A-221ENST00000612856 PPP1R35Q8TAP8 253 aa9.47□□□□□ -0.89
FAM3A-221ENST00000612856 HAS2Q92819 552 aa9.47□□□□□ -0.89
FAM3A-221ENST00000612856 GAB2Q9UQC2 676 aa9.47□□□□□ -0.89
FAM3A-221ENST00000612856 LIPGQ9Y5X9 500 aa9.47□□□□□ -0.89
FAM3A-221ENST00000612856 ACANP16112 2415 aa9.47□□□□□ -0.89
FAM3A-221ENST00000612856 GEMIN2O14893 280 aaKnown RBP9.47□□□□□ -0.89
FAM3A-221ENST00000612856 CRHP06850 196 aa9.47□□□□□ -0.89
FAM3A-221ENST00000612856 GSTP1P09211 210 aaKnown RBP9.47□□□□□ -0.89
FAM3A-221ENST00000612856 PAX6P26367 422 aa9.47□□□□□ -0.89
FAM3A-221ENST00000612856 FAM27E3Q08E93 113 aa9.47□□□□□ -0.89
FAM3A-221ENST00000612856 MEF2DQ14814 521 aa9.47□□□□□ -0.89
FAM3A-221ENST00000612856 PHLDA2Q53GA4 152 aa9.47□□□□□ -0.89
FAM3A-221ENST00000612856 WDR38Q5JTN6 314 aa9.47□□□□□ -0.89
FAM3A-221ENST00000612856 LY6G6FQ5SQ64 297 aa9.47□□□□□ -0.89
FAM3A-221ENST00000612856 RPUSD3Q6P087 351 aaKnown RBP9.47□□□□□ -0.89
FAM3A-221ENST00000612856 SUMF1Q8NBK3 374 aa9.47□□□□□ -0.89
FAM3A-221ENST00000612856 BSCL2Q96G97 398 aaPredicted RBP9.47□□□□□ -0.89
FAM3A-221ENST00000612856 PACRGQ96M98 296 aaPredicted RBP9.47□□□□□ -0.89
FAM3A-221ENST00000612856 TRGC2P03986 189 aa9.47□□□□□ -0.89
FAM3A-221ENST00000612856 GNB3P16520 340 aa9.47□□□□□ -0.89
FAM3A-221ENST00000612856 MRPL14Q6P1L8 145 aaKnown RBP9.47□□□□□ -0.89
FAM3A-221ENST00000612856 CTHRC1Q96CG8 243 aa9.47□□□□□ -0.89
FAM3A-221ENST00000612856 ZNF764Q96H86 408 aaPredicted RBP9.47□□□□□ -0.89
FAM3A-221ENST00000612856 OR5AC2Q9NZP5 309 aa9.47□□□□□ -0.89
FAM3A-221ENST00000612856 CARHSP1Q9Y2V2 147 aaKnown RBP9.47□□□□□ -0.89
FAM3A-221ENST00000612856 NTN3O00634 580 aaPredicted RBP9.46□□□□□ -0.89
FAM3A-221ENST00000612856 RAC2P15153 192 aa9.46□□□□□ -0.89
FAM3A-221ENST00000612856 ADRA2CP18825 462 aa9.46□□□□□ -0.89
FAM3A-221ENST00000612856 UCNP55089 124 aa9.46□□□□□ -0.89
FAM3A-221ENST00000612856 REC114Q7Z4M0 266 aa9.46□□□□□ -0.89
FAM3A-221ENST00000612856 FAM185AQ8N0U4 392 aa9.46□□□□□ -0.89
FAM3A-221ENST00000612856 OR51H1Q8NH63 302 aa9.46□□□□□ -0.89
FAM3A-221ENST00000612856 OTOSQ8NHW6 89 aa9.46□□□□□ -0.89
FAM3A-221ENST00000612856 RRNAD1Q96FB5 475 aaKnown RBP9.46□□□□□ -0.89
FAM3A-221ENST00000612856 DEPPQ9NTK1 212 aa9.46□□□□□ -0.89
FAM3A-221ENST00000612856 HECTD1Q9ULT8 2610 aa9.46□□□□□ -0.9
FAM3A-221ENST00000612856 HEXAP06865 529 aa9.46□□□□□ -0.9
FAM3A-221ENST00000612856 SELEP16581 610 aa9.46□□□□□ -0.9
FAM3A-221ENST00000612856 FKBP2P26885 142 aaKnown RBP9.46□□□□□ -0.9
FAM3A-221ENST00000612856 CD82P27701 267 aa9.46□□□□□ -0.9
FAM3A-221ENST00000612856 RPL12P30050 165 aaKnown RBP9.46□□□□□ -0.9
FAM3A-221ENST00000612856 PKIAP61925 76 aa9.46□□□□□ -0.9
FAM3A-221ENST00000612856 GRB2P62993 217 aaKnown RBP9.46□□□□□ -0.9
FAM3A-221ENST00000612856 HMGN3Q15651 99 aa9.46□□□□□ -0.9
FAM3A-221ENST00000612856 SYS1Q8N2H4 156 aa9.46□□□□□ -0.9
FAM3A-221ENST00000612856 THRSPQ92748 146 aa9.46□□□□□ -0.9
FAM3A-221ENST00000612856 EGLN1Q9GZT9 426 aa9.46□□□□□ -0.9
FAM3A-221ENST00000612856 SIRT7Q9NRC8 400 aa9.46□□□□□ -0.9
FAM3A-221ENST00000612856 TGOLN2O43493 480 aa9.46□□□□□ -0.9
FAM3A-221ENST00000612856 RNPS1Q15287 305 aaKnown RBP9.46□□□□□ -0.9
FAM3A-221ENST00000612856 TERB2Q8NHR7 220 aa9.46□□□□□ -0.9
FAM3A-221ENST00000612856 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.46□□□□□ -0.9
FAM3A-221ENST00000612856 HSF4Q9ULV5 492 aa9.46□□□□□ -0.9
FAM3A-221ENST00000612856 VSIG4Q9Y279 399 aa9.46□□□□□ -0.9
FAM3A-221ENST00000612856 MALRD1Q5VYJ5 2156 aa9.45□□□□□ -0.9
FAM3A-221ENST00000612856 DEGS1O15121 323 aa9.45□□□□□ -0.9
FAM3A-221ENST00000612856 OGG1O15527 345 aa9.45□□□□□ -0.9
FAM3A-221ENST00000612856 NUFIP2Q7Z417 695 aaKnown RBP9.45□□□□□ -0.9
FAM3A-221ENST00000612856 TMEM123Q8N131 208 aa9.45□□□□□ -0.9
FAM3A-221ENST00000612856 KDF1Q8NAX2 398 aaPredicted RBP9.45□□□□□ -0.9
FAM3A-221ENST00000612856 OR4D6Q8NGJ1 314 aa9.45□□□□□ -0.9
FAM3A-221ENST00000612856 TIMP4Q99727 224 aa9.45□□□□□ -0.9
FAM3A-221ENST00000612856 ZNF355PQ9NSJ1 428 aa9.45□□□□□ -0.9
FAM3A-221ENST00000612856 DEFB108AA8MXU0 73 aa9.45□□□□□ -0.9
FAM3A-221ENST00000612856 NUDT19A8MXV4 375 aa9.45□□□□□ -0.9
FAM3A-221ENST00000612856 SERPINE2P07093 398 aa9.45□□□□□ -0.9
FAM3A-221ENST00000612856 TNFSF10P50591 281 aa9.45□□□□□ -0.9
FAM3A-221ENST00000612856 SUCLG1P53597 346 aaKnown RBP9.45□□□□□ -0.9
FAM3A-221ENST00000612856 LGALS4P56470 323 aa9.45□□□□□ -0.9
FAM3A-221ENST00000612856 EFNB1P98172 346 aa9.45□□□□□ -0.9
FAM3A-221ENST00000612856 GPR157Q5UAW9 335 aa9.45□□□□□ -0.9
FAM3A-221ENST00000612856 VWA1Q6PCB0 445 aa9.45□□□□□ -0.9
FAM3A-221ENST00000612856 TMEM108Q6UXF1 575 aa9.45□□□□□ -0.9
FAM3A-221ENST00000612856 FBXL14Q8N1E6 418 aa9.45□□□□□ -0.9
FAM3A-221ENST00000612856 ZCCHC24Q8N2G6 241 aaKnown RBP9.45□□□□□ -0.9
FAM3A-221ENST00000612856 PHYHIPQ92561 330 aa9.45□□□□□ -0.9
FAM3A-221ENST00000612856 FAM131CQ96AQ9 280 aa9.45□□□□□ -0.9
FAM3A-221ENST00000612856 SEH1LQ96EE3 360 aa9.45□□□□□ -0.9
FAM3A-221ENST00000612856 SRXN1Q9BYN0 137 aa9.45□□□□□ -0.9
FAM3A-221ENST00000612856 PRO3102Q9H379 93 aa9.45□□□□□ -0.9
FAM3A-221ENST00000612856 RCL1Q9Y2P8 373 aaKnown RBP9.45□□□□□ -0.9
FAM3A-221ENST00000612856 FREM1Q5H8C1 2179 aa9.45□□□□□ -0.9
FAM3A-221ENST00000612856 FN1P02751 2386 aaKnown RBP9.45□□□□□ -0.9
FAM3A-221ENST00000612856 OR5H1A6NKK0 313 aa9.45□□□□□ -0.9
FAM3A-221ENST00000612856 SEC14L6B5MCN3 397 aa9.45□□□□□ -0.9
FAM3A-221ENST00000612856 ALOX5APP20292 161 aa9.45□□□□□ -0.9
FAM3A-221ENST00000612856 CEBPEQ15744 281 aa9.45□□□□□ -0.9
FAM3A-221ENST00000612856 SLC22A24Q8N4F4 322 aa9.45□□□□□ -0.9
FAM3A-221ENST00000612856 ZNF837Q96EG3 531 aaPredicted RBP9.45□□□□□ -0.9
FAM3A-221ENST00000612856 OR2J1Q9GZK6 312 aa9.45□□□□□ -0.9
FAM3A-221ENST00000612856 LAMP3Q9UQV4 416 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms