RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 NUDCD2Q8WVJ2 157 aa7.44□□□□□ -1.22
SMAD4-217ENST00000611848 ITLN1Q8WWA0 313 aa7.44□□□□□ -1.22
SMAD4-217ENST00000611848 SNAPC3Q92966 411 aa7.44□□□□□ -1.22
SMAD4-217ENST00000611848 ERGIC1Q969X5 290 aa7.44□□□□□ -1.22
SMAD4-217ENST00000611848 MEGF10Q96KG7 1140 aa7.44□□□□□ -1.22
SMAD4-217ENST00000611848 URM1Q9BTM9 101 aaKnown RBP7.44□□□□□ -1.22
SMAD4-217ENST00000611848 TMEM59Q9BXS4 323 aa7.44□□□□□ -1.22
SMAD4-217ENST00000611848 BPESC1Q9GZL8 116 aa7.44□□□□□ -1.22
SMAD4-217ENST00000611848 CST11Q9H112 138 aa7.44□□□□□ -1.22
SMAD4-217ENST00000611848 PIGLQ9Y2B2 252 aa7.44□□□□□ -1.22
SMAD4-217ENST00000611848 DOCK11Q5JSL3 2073 aa7.43□□□□□ -1.22
SMAD4-217ENST00000611848 A0A096LNT2 108 aa7.43□□□□□ -1.22
SMAD4-217ENST00000611848 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.43□□□□□ -1.22
SMAD4-217ENST00000611848 H0YL77 283 aa7.43□□□□□ -1.22
SMAD4-217ENST00000611848 MFNGO00587 321 aa7.43□□□□□ -1.22
SMAD4-217ENST00000611848 SMAD7O15105 426 aaKnown RBP7.43□□□□□ -1.22
SMAD4-217ENST00000611848 SOCS1O15524 211 aa7.43□□□□□ -1.22
SMAD4-217ENST00000611848 OR4E1P0C645 316 aa7.43□□□□□ -1.22
SMAD4-217ENST00000611848 USF1P22415 310 aaPredicted RBP7.43□□□□□ -1.22
SMAD4-217ENST00000611848 CA6P23280 308 aa7.43□□□□□ -1.22
SMAD4-217ENST00000611848 CD200P41217 278 aa7.43□□□□□ -1.22
SMAD4-217ENST00000611848 GATA4P43694 442 aa7.43□□□□□ -1.22
SMAD4-217ENST00000611848 RIPPLY1Q0D2K3 151 aa7.43□□□□□ -1.22
SMAD4-217ENST00000611848 C2orf68Q2NKX9 166 aa7.43□□□□□ -1.22
SMAD4-217ENST00000611848 ZBTB37Q5TC79 503 aa7.43□□□□□ -1.22
SMAD4-217ENST00000611848 TEX261Q6UWH6 196 aa7.43□□□□□ -1.22
SMAD4-217ENST00000611848 C1QL2Q7Z5L3 287 aa7.43□□□□□ -1.22
SMAD4-217ENST00000611848 RTN4RL2Q86UN3 420 aa7.43□□□□□ -1.22
SMAD4-217ENST00000611848 CIARTQ8N365 385 aaPredicted RBP7.43□□□□□ -1.22
SMAD4-217ENST00000611848 GVQW1Q8N7I0 195 aa7.43□□□□□ -1.22
SMAD4-217ENST00000611848 ZDHHC22Q8N966 263 aa7.43□□□□□ -1.22
SMAD4-217ENST00000611848 SEMA6DQ8NFY4 1073 aa7.43□□□□□ -1.22
SMAD4-217ENST00000611848 CCL17Q92583 94 aa7.43□□□□□ -1.22
SMAD4-217ENST00000611848 MRGPRFQ96AM1 343 aa7.43□□□□□ -1.22
SMAD4-217ENST00000611848 SPSB1Q96BD6 273 aa7.43□□□□□ -1.22
SMAD4-217ENST00000611848 RAB3CQ96E17 227 aa7.43□□□□□ -1.22
SMAD4-217ENST00000611848 GPER1Q99527 375 aa7.43□□□□□ -1.22
SMAD4-217ENST00000611848 ADAT1Q9BUB4 502 aaKnown RBP7.43□□□□□ -1.22
SMAD4-217ENST00000611848 TM2D1Q9BX74 207 aa7.43□□□□□ -1.22
SMAD4-217ENST00000611848 CHIAQ9BZP6 476 aa7.43□□□□□ -1.22
SMAD4-217ENST00000611848 BANF2Q9H503 90 aa7.43□□□□□ -1.22
SMAD4-217ENST00000611848 U3KQ87 197 aa7.43□□□□□ -1.22
SMAD4-217ENST00000611848 WNK2Q9Y3S1 2297 aa7.43□□□□□ -1.22
SMAD4-217ENST00000611848 HIVEP2P31629 2446 aa7.43□□□□□ -1.22
SMAD4-217ENST00000611848 MALRD1Q5VYJ5 2156 aa7.42□□□□□ -1.22
SMAD4-217ENST00000611848 A0A1W2PP11 408 aa7.42□□□□□ -1.22
SMAD4-217ENST00000611848 HMSDA8MTL9 139 aa7.42□□□□□ -1.22
SMAD4-217ENST00000611848 F5H5P2 479 aa7.42□□□□□ -1.22
SMAD4-217ENST00000611848 PPIHO43447 177 aaKnown RBP7.42□□□□□ -1.22
SMAD4-217ENST00000611848 CA11O75493 328 aa7.42□□□□□ -1.22
SMAD4-217ENST00000611848 CRTAPO75718 401 aaPredicted RBP7.42□□□□□ -1.22
SMAD4-217ENST00000611848 CST4P01036 141 aa7.42□□□□□ -1.22
SMAD4-217ENST00000611848 ACKR3P25106 362 aa7.42□□□□□ -1.22
SMAD4-217ENST00000611848 HTR2BP41595 481 aa7.42□□□□□ -1.22
SMAD4-217ENST00000611848 CBX5P45973 191 aa7.42□□□□□ -1.22
SMAD4-217ENST00000611848 H2BFSP57053 126 aa7.42□□□□□ -1.22
SMAD4-217ENST00000611848 GNG2P59768 71 aa7.42□□□□□ -1.22
SMAD4-217ENST00000611848 SLC22A6Q4U2R8 563 aa7.42□□□□□ -1.22
SMAD4-217ENST00000611848 C4orf46Q504U0 113 aa7.42□□□□□ -1.22
SMAD4-217ENST00000611848 SPRNQ5BIV9 151 aa7.42□□□□□ -1.22
SMAD4-217ENST00000611848 VAX1Q5SQQ9 334 aa7.42□□□□□ -1.22
SMAD4-217ENST00000611848 TMEM42Q69YG0 159 aa7.42□□□□□ -1.22
SMAD4-217ENST00000611848 FAHD2BQ6P2I3 314 aaPredicted RBP7.42□□□□□ -1.22
SMAD4-217ENST00000611848 PEG10Q86TG7 708 aaKnown RBP7.42□□□□□ -1.22
SMAD4-217ENST00000611848 SLC25A42Q86VD7 318 aa7.42□□□□□ -1.22
SMAD4-217ENST00000611848 OR8H1Q8NGG4 311 aa7.42□□□□□ -1.22
SMAD4-217ENST00000611848 RAB1CQ92928 201 aa7.42□□□□□ -1.22
SMAD4-217ENST00000611848 WDR89Q96FK6 387 aaPredicted RBP7.42□□□□□ -1.22
SMAD4-217ENST00000611848 FAHD2AQ96GK7 314 aa7.42□□□□□ -1.22
SMAD4-217ENST00000611848 TIMD4Q96H15 378 aa7.42□□□□□ -1.22
SMAD4-217ENST00000611848 PAPOLGQ9BWT3 736 aaKnown RBP7.42□□□□□ -1.22
SMAD4-217ENST00000611848 TMEM165Q9HC07 324 aa7.42□□□□□ -1.22
SMAD4-217ENST00000611848 GCM1Q9NP62 436 aa7.42□□□□□ -1.22
SMAD4-217ENST00000611848 IFT46Q9NQC8 304 aa7.42□□□□□ -1.22
SMAD4-217ENST00000611848 OPN4Q9UHM6 478 aa7.42□□□□□ -1.22
SMAD4-217ENST00000611848 PPP1R3CQ9UQK1 317 aa7.42□□□□□ -1.22
SMAD4-217ENST00000611848 VSIG4Q9Y279 399 aa7.42□□□□□ -1.22
SMAD4-217ENST00000611848 MPC1Q9Y5U8 109 aa7.42□□□□□ -1.22
SMAD4-217ENST00000611848 ZANQ9Y493 2812 aa7.42□□□□□ -1.22
SMAD4-217ENST00000611848 ZNF816-ZNF321PA0A0X1KG74 233 aa7.41□□□□□ -1.22
SMAD4-217ENST00000611848 CEACAM18A8MTB9 384 aa7.41□□□□□ -1.22
SMAD4-217ENST00000611848 GOSR2O14653 212 aa7.41□□□□□ -1.22
SMAD4-217ENST00000611848 PTBP3O95758 552 aaKnown RBP7.41□□□□□ -1.22
SMAD4-217ENST00000611848 MGMTP16455 207 aa7.41□□□□□ -1.22
SMAD4-217ENST00000611848 PRKACBP22694 351 aa7.41□□□□□ -1.22
SMAD4-217ENST00000611848 ZBTB25P24278 435 aa7.41□□□□□ -1.22
SMAD4-217ENST00000611848 HRH1P35367 487 aa7.41□□□□□ -1.22
SMAD4-217ENST00000611848 TSPAN5P62079 268 aa7.41□□□□□ -1.22
SMAD4-217ENST00000611848 SRSF4Q08170 494 aaKnown RBP7.41□□□□□ -1.22
SMAD4-217ENST00000611848 ARL6IP1Q15041 203 aa7.41□□□□□ -1.22
SMAD4-217ENST00000611848 SCGB2B2Q4G0G5 96 aa7.41□□□□□ -1.22
SMAD4-217ENST00000611848 ACTBL2Q562R1 376 aa7.41□□□□□ -1.22
SMAD4-217ENST00000611848 CLVS2Q5SYC1 327 aa7.41□□□□□ -1.22
SMAD4-217ENST00000611848 OR52W1Q6IF63 320 aa7.41□□□□□ -1.22
SMAD4-217ENST00000611848 ASCL4Q6XD76 172 aa7.41□□□□□ -1.22
SMAD4-217ENST00000611848 HOGA1Q86XE5 327 aa7.41□□□□□ -1.22
SMAD4-217ENST00000611848 C12orf45Q8N5I9 185 aaPredicted RBP7.41□□□□□ -1.22
SMAD4-217ENST00000611848 ZNF680Q8NEM1 530 aa7.41□□□□□ -1.22
SMAD4-217ENST00000611848 OR51T1Q8NGJ9 327 aa7.41□□□□□ -1.22
SMAD4-217ENST00000611848 OR4K15Q8NH41 348 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms