RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 NQO2P16083 231 aa7.53□□□□□ -1.2
LIG4-204ENST00000611712 CFPP27918 469 aa7.53□□□□□ -1.2
LIG4-204ENST00000611712 COL19A1Q14993 1142 aa7.53□□□□□ -1.2
LIG4-204ENST00000611712 OR8B8Q15620 311 aa7.53□□□□□ -1.2
LIG4-204ENST00000611712 ZNF239Q16600 458 aaKnown RBP7.53□□□□□ -1.2
LIG4-204ENST00000611712 ZNF787Q6DD87 383 aa7.53□□□□□ -1.2
LIG4-204ENST00000611712 DHRS13Q6UX07 377 aa7.53□□□□□ -1.2
LIG4-204ENST00000611712 DNM1P46Q6ZS02 220 aa7.53□□□□□ -1.2
LIG4-204ENST00000611712 DMBX1Q8NFW5 382 aa7.53□□□□□ -1.2
LIG4-204ENST00000611712 NANPQ8TBE9 248 aa7.53□□□□□ -1.2
LIG4-204ENST00000611712 IMMP1LQ96LU5 166 aa7.53□□□□□ -1.2
LIG4-204ENST00000611712 CDX2Q99626 313 aaPredicted RBP7.53□□□□□ -1.2
LIG4-204ENST00000611712 TM2D1Q9BX74 207 aa7.53□□□□□ -1.2
LIG4-204ENST00000611712 WNT5BQ9H1J7 359 aa7.53□□□□□ -1.2
LIG4-204ENST00000611712 HTTP42858 3142 aa7.53□□□□□ -1.2
LIG4-204ENST00000611712 PRSS44E7EML9 344 aa7.52□□□□□ -1.2
LIG4-204ENST00000611712 CCL1P22362 96 aa7.52□□□□□ -1.2
LIG4-204ENST00000611712 MEOX1P50221 254 aa7.52□□□□□ -1.2
LIG4-204ENST00000611712 DYNLT3P51808 116 aa7.52□□□□□ -1.2
LIG4-204ENST00000611712 RNPS1Q15287 305 aaKnown RBP7.52□□□□□ -1.2
LIG4-204ENST00000611712 ADIRFQ15847 76 aa7.52□□□□□ -1.2
LIG4-204ENST00000611712 CSRP2Q16527 193 aa7.52□□□□□ -1.2
LIG4-204ENST00000611712 VHLLQ6RSH7 139 aa7.52□□□□□ -1.2
LIG4-204ENST00000611712 GCNT2Q8N0V5 402 aa7.52□□□□□ -1.2
LIG4-204ENST00000611712 LHX4Q969G2 390 aa7.52□□□□□ -1.2
LIG4-204ENST00000611712 ZNF488Q96MN9 340 aa7.52□□□□□ -1.2
LIG4-204ENST00000611712 CACNG5Q9UF02 275 aa7.52□□□□□ -1.2
LIG4-204ENST00000611712 TRGV5A0A0B4J1U4 118 aa7.52□□□□□ -1.21
LIG4-204ENST00000611712 A0A1W2PPH5 198 aa7.52□□□□□ -1.21
LIG4-204ENST00000611712 BTBD17A6NE02 478 aa7.52□□□□□ -1.21
LIG4-204ENST00000611712 DNASE2O00115 360 aaPredicted RBP7.52□□□□□ -1.21
LIG4-204ENST00000611712 UMODP07911 640 aa7.52□□□□□ -1.21
LIG4-204ENST00000611712 PTGDSP41222 190 aa7.52□□□□□ -1.21
LIG4-204ENST00000611712 NPBWR2P48146 333 aa7.52□□□□□ -1.21
LIG4-204ENST00000611712 FABP6P51161 128 aa7.52□□□□□ -1.21
LIG4-204ENST00000611712 QRFPP83859 136 aa7.52□□□□□ -1.21
LIG4-204ENST00000611712 CXorf67Q86X51 503 aaPredicted RBP7.52□□□□□ -1.21
LIG4-204ENST00000611712 C17orf78Q8N4C9 275 aa7.52□□□□□ -1.21
LIG4-204ENST00000611712 OR2M7Q8NG81 312 aa7.52□□□□□ -1.21
LIG4-204ENST00000611712 OR52M1Q8NGK5 317 aa7.52□□□□□ -1.21
LIG4-204ENST00000611712 ERGIC1Q969X5 290 aa7.52□□□□□ -1.21
LIG4-204ENST00000611712 IP6K3Q96PC2 410 aa7.52□□□□□ -1.21
LIG4-204ENST00000611712 MEX3AA1L020 520 aaKnown RBP7.52□□□□□ -1.21
LIG4-204ENST00000611712 OR5B21A6NL26 309 aa7.52□□□□□ -1.21
LIG4-204ENST00000611712 KRASP01116 189 aa7.52□□□□□ -1.21
LIG4-204ENST00000611712 PDGFBP01127 241 aaPredicted RBP7.52□□□□□ -1.21
LIG4-204ENST00000611712 IFNA10P01566 189 aa7.52□□□□□ -1.21
LIG4-204ENST00000611712 SCTP09683 121 aa7.52□□□□□ -1.21
LIG4-204ENST00000611712 METTL15P1P0C7V9 234 aa7.52□□□□□ -1.21
LIG4-204ENST00000611712 S100A12P80511 92 aa7.52□□□□□ -1.21
LIG4-204ENST00000611712 EIF3IQ13347 325 aaKnown RBP7.52□□□□□ -1.21
LIG4-204ENST00000611712 RIPPLY2Q5TAB7 128 aa7.52□□□□□ -1.21
LIG4-204ENST00000611712 CST9LP1Q5W188 147 aa7.52□□□□□ -1.21
LIG4-204ENST00000611712 H2BFWTQ7Z2G1 175 aa7.52□□□□□ -1.21
LIG4-204ENST00000611712 FAM89BQ8N5H3 189 aa7.52□□□□□ -1.21
LIG4-204ENST00000611712 C15orf54Q8N8G6 183 aa7.52□□□□□ -1.21
LIG4-204ENST00000611712 UBAC2Q8NBM4 344 aa7.52□□□□□ -1.21
LIG4-204ENST00000611712 MOB3AQ96BX8 217 aa7.52□□□□□ -1.21
LIG4-204ENST00000611712 TRIB1Q96RU8 372 aa7.52□□□□□ -1.21
LIG4-204ENST00000611712 IER2Q9BTL4 223 aa7.52□□□□□ -1.21
LIG4-204ENST00000611712 RCC2Q9P258 522 aaKnown RBP7.52□□□□□ -1.21
LIG4-204ENST00000611712 IGKV1D-8A0A087WSZ0 117 aa7.52□□□□□ -1.21
LIG4-204ENST00000611712 CLEC18AA5D8T8 446 aa7.52□□□□□ -1.21
LIG4-204ENST00000611712 S100A8P05109 93 aa7.52□□□□□ -1.21
LIG4-204ENST00000611712 ATP6V0CP27449 155 aa7.52□□□□□ -1.21
LIG4-204ENST00000611712 ZNF154Q13106 437 aa7.52□□□□□ -1.21
LIG4-204ENST00000611712 MPV17LQ2QL34 196 aa7.52□□□□□ -1.21
LIG4-204ENST00000611712 PDLIM3Q53GG5 364 aaPredicted RBP7.52□□□□□ -1.21
LIG4-204ENST00000611712 ZNF429Q86V71 674 aa7.52□□□□□ -1.21
LIG4-204ENST00000611712 CLEC18CQ8NCF0 446 aa7.52□□□□□ -1.21
LIG4-204ENST00000611712 OR10V1Q8NGI7 309 aa7.52□□□□□ -1.21
LIG4-204ENST00000611712 FANCFQ9NPI8 374 aa7.52□□□□□ -1.21
LIG4-204ENST00000611712 SEMA5BQ9P283 1151 aa7.52□□□□□ -1.21
LIG4-204ENST00000611712 MPC1Q9Y5U8 109 aa7.52□□□□□ -1.21
LIG4-204ENST00000611712 LIPGQ9Y5X9 500 aa7.52□□□□□ -1.21
LIG4-204ENST00000611712 A0A0G2JMM0 328 aa7.51□□□□□ -1.21
LIG4-204ENST00000611712 A0A0U1RQK1 487 aa7.51□□□□□ -1.21
LIG4-204ENST00000611712 hCG_1809904A0A1W2PP81 198 aa7.51□□□□□ -1.21
LIG4-204ENST00000611712 A0A1W2PPB8 328 aa7.51□□□□□ -1.21
LIG4-204ENST00000611712 A0A1W2PR64 198 aa7.51□□□□□ -1.21
LIG4-204ENST00000611712 A0A1W2PRS3 328 aa7.51□□□□□ -1.21
LIG4-204ENST00000611712 A0A1W2PRV1 198 aa7.51□□□□□ -1.21
LIG4-204ENST00000611712 RBFOX3A6NFN3 312 aa7.51□□□□□ -1.21
LIG4-204ENST00000611712 ZNF727A8MUV8 499 aa7.51□□□□□ -1.21
LIG4-204ENST00000611712 KIR3DP1A8MWS1 328 aa7.51□□□□□ -1.21
LIG4-204ENST00000611712 B4E171 279 aa7.51□□□□□ -1.21
LIG4-204ENST00000611712 K7ESF4 209 aa7.51□□□□□ -1.21
LIG4-204ENST00000611712 SYNGR3O43761 229 aa7.51□□□□□ -1.21
LIG4-204ENST00000611712 NAT1P18440 290 aa7.51□□□□□ -1.21
LIG4-204ENST00000611712 CEACAM6P40199 344 aa7.51□□□□□ -1.21
LIG4-204ENST00000611712 TSPAN7P41732 249 aa7.51□□□□□ -1.21
LIG4-204ENST00000611712 FHITP49789 147 aa7.51□□□□□ -1.21
LIG4-204ENST00000611712 TMEM187Q14656 261 aa7.51□□□□□ -1.21
LIG4-204ENST00000611712 HIKESHIQ53FT3 197 aa7.51□□□□□ -1.21
LIG4-204ENST00000611712 RAB40CQ96S21 281 aa7.51□□□□□ -1.21
LIG4-204ENST00000611712 PPP1R2P9O14990 202 aa7.51□□□□□ -1.21
LIG4-204ENST00000611712 SPINT2O43291 252 aa7.51□□□□□ -1.21
LIG4-204ENST00000611712 CTSSP25774 331 aa7.51□□□□□ -1.21
LIG4-204ENST00000611712 PSMB3P49720 205 aa7.51□□□□□ -1.21
LIG4-204ENST00000611712 SUCLG1P53597 346 aaKnown RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms