RNA–Protein interactions for RNA: ENST00000611016.2

TNXB-208, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,083 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-208ENST00000611016 ZNF665Q9H7R5 613 aa13.73□□□□□ -0.21
TNXB-208ENST00000611016 DOK5Q9P104 306 aa13.73□□□□□ -0.21
TNXB-208ENST00000611016 HLA-GP17693 338 aa13.73□□□□□ -0.21
TNXB-208ENST00000611016 TMEM97Q5BJF2 176 aa13.73□□□□□ -0.21
TNXB-208ENST00000611016 GPR27Q9NS67 375 aa13.73□□□□□ -0.21
TNXB-208ENST00000611016 TECRQ9NZ01 308 aaKnown RBP13.73□□□□□ -0.21
TNXB-208ENST00000611016 ZMIZ1Q9ULJ6 1067 aa13.73□□□□□ -0.21
TNXB-208ENST00000611016 PCDHGA9Q9Y5G4 932 aaKnown RBP13.73□□□□□ -0.21
TNXB-208ENST00000611016 IGHV3OR15-7A0A075B7D8 119 aa13.72□□□□□ -0.21
TNXB-208ENST00000611016 GEMIN2O14893 280 aaKnown RBP13.72□□□□□ -0.21
TNXB-208ENST00000611016 GFRA3O60609 400 aa13.72□□□□□ -0.21
TNXB-208ENST00000611016 CD1AP06126 327 aa13.72□□□□□ -0.21
TNXB-208ENST00000611016 GZMHP20718 246 aa13.72□□□□□ -0.21
TNXB-208ENST00000611016 HIST1H3AP68431 136 aa13.72□□□□□ -0.21
TNXB-208ENST00000611016 ZNF260Q3ZCT1 412 aa13.72□□□□□ -0.21
TNXB-208ENST00000611016 SLC25A45Q8N413 288 aa13.72□□□□□ -0.21
TNXB-208ENST00000611016 ANAPC16Q96DE5 110 aa13.72□□□□□ -0.21
TNXB-208ENST00000611016 RASL11BQ9BPW5 248 aa13.72□□□□□ -0.21
TNXB-208ENST00000611016 IGHV1-45A0A0A0MS14 117 aa13.72□□□□□ -0.21
TNXB-208ENST00000611016 ZNF737O75373 536 aa13.72□□□□□ -0.21
TNXB-208ENST00000611016 ZNF788Q6ZQV5 615 aa13.72□□□□□ -0.21
TNXB-208ENST00000611016 TMEM208Q9BTX3 173 aa13.72□□□□□ -0.21
TNXB-208ENST00000611016 PILRBQ9UKJ0 227 aa13.72□□□□□ -0.21
TNXB-208ENST00000611016 COL4A1P02462 1669 aa13.72□□□□□ -0.21
TNXB-208ENST00000611016 KRTDAPP60985 99 aa13.72□□□□□ -0.21
TNXB-208ENST00000611016 MSL2Q9HCI7 577 aa13.72□□□□□ -0.21
TNXB-208ENST00000611016 MARF1Q9Y4F3 1742 aaKnown RBP13.72□□□□□ -0.21
TNXB-208ENST00000611016 B4DEV8 164 aa13.72□□□□□ -0.21
TNXB-208ENST00000611016 RAB32Q13637 225 aa13.72□□□□□ -0.21
TNXB-208ENST00000611016 WDR31Q8NA23 367 aa13.72□□□□□ -0.21
TNXB-208ENST00000611016 CCL27Q9Y4X3 112 aa13.72□□□□□ -0.21
TNXB-208ENST00000611016 COL11A2P13942 1736 aaPredicted RBP13.72□□□□□ -0.21
TNXB-208ENST00000611016 LOC102723971A0A1B0GUV8 181 aa13.72□□□□□ -0.21
TNXB-208ENST00000611016 OR2T8A6NH00 312 aa13.72□□□□□ -0.21
TNXB-208ENST00000611016 ADAM11O75078 769 aa13.72□□□□□ -0.21
TNXB-208ENST00000611016 RPS4Y1P22090 263 aaKnown RBP13.72□□□□□ -0.21
TNXB-208ENST00000611016 RPS4XP62701 263 aaKnown RBP13.72□□□□□ -0.21
TNXB-208ENST00000611016 ANXA10Q9UJ72 324 aa13.72□□□□□ -0.21
TNXB-208ENST00000611016 MMP24Q9Y5R2 645 aa13.72□□□□□ -0.21
TNXB-208ENST00000611016 HSD17B13Q7Z5P4 300 aaPredicted RBP13.71□□□□□ -0.21
TNXB-208ENST00000611016 OR10G4Q8NGN3 311 aa13.71□□□□□ -0.21
TNXB-208ENST00000611016 OR10G9Q8NGN4 311 aa13.71□□□□□ -0.21
TNXB-208ENST00000611016 OR10G7Q8NGN6 311 aa13.71□□□□□ -0.21
TNXB-208ENST00000611016 SEC11CQ9BY50 192 aa13.71□□□□□ -0.21
TNXB-208ENST00000611016 SLC52A3Q9NQ40 469 aa13.71□□□□□ -0.21
TNXB-208ENST00000611016 TCTEX1D1Q8N7M0 179 aa13.71□□□□□ -0.21
TNXB-208ENST00000611016 ZNF385AQ96PM9 386 aaKnown RBP13.71□□□□□ -0.21
TNXB-208ENST00000611016 SCO1O75880 301 aa13.71□□□□□ -0.21
TNXB-208ENST00000611016 LYZP61626 148 aa13.71□□□□□ -0.21
TNXB-208ENST00000611016 SPNS3Q6ZMD2 512 aa13.71□□□□□ -0.21
TNXB-208ENST00000611016 OR52L2PQ8NGH6 319 aa13.71□□□□□ -0.21
TNXB-208ENST00000611016 PTX4Q96A99 478 aa13.71□□□□□ -0.21
TNXB-208ENST00000611016 C12orf57Q99622 126 aa13.71□□□□□ -0.21
TNXB-208ENST00000611016 SLC25A22Q9H936 323 aa13.71□□□□□ -0.21
TNXB-208ENST00000611016 NAT8Q9UHE5 227 aa13.71□□□□□ -0.21
TNXB-208ENST00000611016 PRNDQ9UKY0 176 aa13.71□□□□□ -0.21
TNXB-208ENST00000611016 GTF2H5Q6ZYL4 71 aa13.71□□□□□ -0.22
TNXB-208ENST00000611016 HEXA-AS1Q9H8Q6 139 aa13.71□□□□□ -0.22
TNXB-208ENST00000611016 J3QT63 122 aa13.7□□□□□ -0.22
TNXB-208ENST00000611016 HNRNPA3P51991 378 aaKnown RBP13.7□□□□□ -0.22
TNXB-208ENST00000611016 FAM74A3Q4VXF1 159 aa13.7□□□□□ -0.22
TNXB-208ENST00000611016 FAM219AQ8IW50 185 aa13.7□□□□□ -0.22
TNXB-208ENST00000611016 STPG2Q8N412 459 aa13.7□□□□□ -0.22
TNXB-208ENST00000611016 DDA1Q9BW61 102 aa13.7□□□□□ -0.22
TNXB-208ENST00000611016 Q9N2K0 584 aa13.7□□□□□ -0.22
TNXB-208ENST00000611016 HOXD4P09016 255 aaPredicted RBP13.7□□□□□ -0.22
TNXB-208ENST00000611016 IFI6P09912 130 aa13.7□□□□□ -0.22
TNXB-208ENST00000611016 ORM2P19652 201 aa13.7□□□□□ -0.22
TNXB-208ENST00000611016 NAGKQ9UJ70 344 aa13.7□□□□□ -0.22
TNXB-208ENST00000611016 FAM24AA6NFZ4 105 aa13.7□□□□□ -0.22
TNXB-208ENST00000611016 CCKARP32238 428 aa13.7□□□□□ -0.22
TNXB-208ENST00000611016 PMELP40967 661 aa13.7□□□□□ -0.22
TNXB-208ENST00000611016 OPN3Q9H1Y3 402 aaPredicted RBP13.7□□□□□ -0.22
TNXB-208ENST00000611016 KCNMB2Q9Y691 235 aa13.7□□□□□ -0.22
TNXB-208ENST00000611016 SOCS1O15524 211 aa13.7□□□□□ -0.22
TNXB-208ENST00000611016 Q1RN00 199 aa13.7□□□□□ -0.22
TNXB-208ENST00000611016 DPPA3Q6W0C5 159 aa13.7□□□□□ -0.22
TNXB-208ENST00000611016 STXBP6Q8NFX7 210 aa13.7□□□□□ -0.22
TNXB-208ENST00000611016 PERPQ96FX8 193 aa13.7□□□□□ -0.22
TNXB-208ENST00000611016 ELOA3CA0A087WX78 387 aaPredicted RBP13.7□□□□□ -0.22
TNXB-208ENST00000611016 NGFRP08138 427 aa13.7□□□□□ -0.22
TNXB-208ENST00000611016 CSF2RBP32927 897 aa13.7□□□□□ -0.22
TNXB-208ENST00000611016 GABRA6Q16445 453 aa13.7□□□□□ -0.22
TNXB-208ENST00000611016 SAP25Q8TEE9 199 aa13.7□□□□□ -0.22
TNXB-208ENST00000611016 R3HDM4Q96D70 268 aa13.7□□□□□ -0.22
TNXB-208ENST00000611016 NAT8BQ9UHF3 227 aa13.7□□□□□ -0.22
TNXB-208ENST00000611016 ZNF716A6NP11 495 aa13.69□□□□□ -0.22
TNXB-208ENST00000611016 FCARP24071 287 aa13.69□□□□□ -0.22
TNXB-208ENST00000611016 MVDP53602 400 aa13.69□□□□□ -0.22
TNXB-208ENST00000611016 VAMP3Q15836 100 aa13.69□□□□□ -0.22
TNXB-208ENST00000611016 PLPPR5Q32ZL2 321 aa13.69□□□□□ -0.22
TNXB-208ENST00000611016 DOLPP1Q86YN1 238 aa13.69□□□□□ -0.22
TNXB-208ENST00000611016 SLC26A10Q8NG04 563 aa13.69□□□□□ -0.22
TNXB-208ENST00000611016 TBC1D26Q86UD7 250 aa13.69□□□□□ -0.22
TNXB-208ENST00000611016 DIRC2Q96SL1 478 aa13.69□□□□□ -0.22
TNXB-208ENST00000611016 CLN8Q9UBY8 286 aa13.69□□□□□ -0.22
TNXB-208ENST00000611016 ANKRD31Q8N7Z5 1873 aa13.69□□□□□ -0.22
TNXB-208ENST00000611016 IGKV1D-16P01601 117 aa13.69□□□□□ -0.22
TNXB-208ENST00000611016 VDAC1P21796 283 aa13.69□□□□□ -0.22
TNXB-208ENST00000611016 KRTCAP3Q53RY4 240 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms