RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 J3QR06 171 aa10.62□□□□□ -0.71
POLR2J3-219ENST00000608621 CLIC3O95833 236 aa10.62□□□□□ -0.71
POLR2J3-219ENST00000608621 HCKP08631 526 aa10.62□□□□□ -0.71
POLR2J3-219ENST00000608621 DBTP11182 482 aaKnown RBP10.62□□□□□ -0.71
POLR2J3-219ENST00000608621 HOXD3P31249 432 aaPredicted RBP10.62□□□□□ -0.71
POLR2J3-219ENST00000608621 ZP1P60852 638 aa10.62□□□□□ -0.71
POLR2J3-219ENST00000608621 SNRPGP62308 76 aaKnown RBP10.62□□□□□ -0.71
POLR2J3-219ENST00000608621 ZIK1Q3SY52 487 aaPredicted RBP10.62□□□□□ -0.71
POLR2J3-219ENST00000608621 MEDAGQ5VYS4 303 aa10.62□□□□□ -0.71
POLR2J3-219ENST00000608621 ZNF329Q86UD4 541 aa10.62□□□□□ -0.71
POLR2J3-219ENST00000608621 LHFPL3Q86UP9 236 aa10.62□□□□□ -0.71
POLR2J3-219ENST00000608621 SERPINA12Q8IW75 414 aa10.62□□□□□ -0.71
POLR2J3-219ENST00000608621 ZNF565Q8N9K5 539 aa10.62□□□□□ -0.71
POLR2J3-219ENST00000608621 OR5D14Q8NGL3 314 aa10.62□□□□□ -0.71
POLR2J3-219ENST00000608621 OR13A1Q8NGR1 328 aa10.62□□□□□ -0.71
POLR2J3-219ENST00000608621 RPEQ96AT9 228 aa10.62□□□□□ -0.71
POLR2J3-219ENST00000608621 KIF25Q9UIL4 384 aa10.62□□□□□ -0.71
POLR2J3-219ENST00000608621 MEIKINA0A087WXM9 373 aa10.61□□□□□ -0.71
POLR2J3-219ENST00000608621 HSPB6O14558 160 aa10.61□□□□□ -0.71
POLR2J3-219ENST00000608621 ALPLP05186 524 aa10.61□□□□□ -0.71
POLR2J3-219ENST00000608621 SNRNP70P08621 437 aaKnown RBP10.61□□□□□ -0.71
POLR2J3-219ENST00000608621 C21orf33P30042 268 aaPredicted RBP10.61□□□□□ -0.71
POLR2J3-219ENST00000608621 MTNR1BP49286 362 aa10.61□□□□□ -0.71
POLR2J3-219ENST00000608621 DIAPH2-AS1Q14236 149 aa10.61□□□□□ -0.71
POLR2J3-219ENST00000608621 ZNF691Q5VV52 312 aa10.61□□□□□ -0.71
POLR2J3-219ENST00000608621 MRPL41Q8IXM3 137 aaKnown RBP10.61□□□□□ -0.71
POLR2J3-219ENST00000608621 LINC00482Q8N8I6 264 aa10.61□□□□□ -0.71
POLR2J3-219ENST00000608621 OR51T1Q8NGJ9 327 aa10.61□□□□□ -0.71
POLR2J3-219ENST00000608621 RFESDQ8TAC1 157 aa10.61□□□□□ -0.71
POLR2J3-219ENST00000608621 LEAP2Q969E1 77 aa10.61□□□□□ -0.71
POLR2J3-219ENST00000608621 TOMM40LQ969M1 308 aa10.61□□□□□ -0.71
POLR2J3-219ENST00000608621 LGALS12Q96DT0 336 aa10.61□□□□□ -0.71
POLR2J3-219ENST00000608621 MRPL48Q96GC5 212 aaKnown RBP10.61□□□□□ -0.71
POLR2J3-219ENST00000608621 ZNF649Q9BS31 505 aa10.61□□□□□ -0.71
POLR2J3-219ENST00000608621 BARHL1Q9BZE3 327 aa10.61□□□□□ -0.71
POLR2J3-219ENST00000608621 ISG20L2Q9H9L3 353 aaKnown RBP10.61□□□□□ -0.71
POLR2J3-219ENST00000608621 FAM53CQ9NYF3 392 aa10.61□□□□□ -0.71
POLR2J3-219ENST00000608621 CALYQ9NYX4 217 aa10.61□□□□□ -0.71
POLR2J3-219ENST00000608621 IDI2-AS1Q9NZ38 188 aa10.61□□□□□ -0.71
POLR2J3-219ENST00000608621 PSG11Q9UQ72 335 aa10.61□□□□□ -0.71
POLR2J3-219ENST00000608621 MOB4Q9Y3A3 225 aa10.61□□□□□ -0.71
POLR2J3-219ENST00000608621 AMMECR1Q9Y4X0 333 aaPredicted RBP10.61□□□□□ -0.71
POLR2J3-219ENST00000608621 ORC6Q9Y5N6 252 aa10.61□□□□□ -0.71
POLR2J3-219ENST00000608621 HSPE1-MOB4S4R3N1 261 aa10.61□□□□□ -0.71
POLR2J3-219ENST00000608621 TRAV24A0A0B4J272 114 aa10.6□□□□□ -0.71
POLR2J3-219ENST00000608621 SNTNA6NMZ2 147 aa10.6□□□□□ -0.71
POLR2J3-219ENST00000608621 E9PQ18 207 aa10.6□□□□□ -0.71
POLR2J3-219ENST00000608621 SULT1B1O43704 296 aa10.6□□□□□ -0.71
POLR2J3-219ENST00000608621 ATP5HO75947 161 aa10.6□□□□□ -0.71
POLR2J3-219ENST00000608621 GLP1RP43220 463 aa10.6□□□□□ -0.71
POLR2J3-219ENST00000608621 EGFEM1PQ0D2K5 195 aa10.6□□□□□ -0.71
POLR2J3-219ENST00000608621 GALEQ14376 348 aa10.6□□□□□ -0.71
POLR2J3-219ENST00000608621 HES1Q14469 280 aa10.6□□□□□ -0.71
POLR2J3-219ENST00000608621 HNF4GQ14541 408 aa10.6□□□□□ -0.71
POLR2J3-219ENST00000608621 ZSCAN26Q16670 478 aa10.6□□□□□ -0.71
POLR2J3-219ENST00000608621 LTC4SQ16873 150 aa10.6□□□□□ -0.71
POLR2J3-219ENST00000608621 PAN3Q58A45 887 aaKnown RBP10.6□□□□□ -0.71
POLR2J3-219ENST00000608621 ELP2Q6IA86 826 aa10.6□□□□□ -0.71
POLR2J3-219ENST00000608621 C11orf87Q6NUJ2 197 aa10.6□□□□□ -0.71
POLR2J3-219ENST00000608621 ETV3LQ6ZN32 361 aa10.6□□□□□ -0.71
POLR2J3-219ENST00000608621 PARP16Q8N5Y8 322 aa10.6□□□□□ -0.71
POLR2J3-219ENST00000608621 DRAM1Q8N682 238 aa10.6□□□□□ -0.71
POLR2J3-219ENST00000608621 OR56B4Q8NH76 319 aa10.6□□□□□ -0.71
POLR2J3-219ENST00000608621 CNIH3Q8TBE1 160 aa10.6□□□□□ -0.71
POLR2J3-219ENST00000608621 PLPPR1Q8TBJ4 325 aa10.6□□□□□ -0.71
POLR2J3-219ENST00000608621 PYDC1Q8WXC3 89 aa10.6□□□□□ -0.71
POLR2J3-219ENST00000608621 NOL4LQ96MY1 436 aaPredicted RBP10.6□□□□□ -0.71
POLR2J3-219ENST00000608621 ALG8Q9BVK2 526 aa10.6□□□□□ -0.71
POLR2J3-219ENST00000608621 NCOR1P1Q9H4R4 102 aa10.6□□□□□ -0.71
POLR2J3-219ENST00000608621 PCDHB16Q9NRJ7 776 aa10.6□□□□□ -0.71
POLR2J3-219ENST00000608621 NBEAL2Q6ZNJ1 2754 aa10.6□□□□□ -0.71
POLR2J3-219ENST00000608621 COL7A1Q02388 2944 aa10.59□□□□□ -0.71
POLR2J3-219ENST00000608621 E9PI62 339 aa10.59□□□□□ -0.71
POLR2J3-219ENST00000608621 EI24O14681 340 aa10.59□□□□□ -0.71
POLR2J3-219ENST00000608621 CIB2O75838 187 aa10.59□□□□□ -0.71
POLR2J3-219ENST00000608621 ZFPL1O95159 310 aa10.59□□□□□ -0.71
POLR2J3-219ENST00000608621 TMEM11P17152 192 aa10.59□□□□□ -0.71
POLR2J3-219ENST00000608621 THBS3P49746 956 aa10.59□□□□□ -0.71
POLR2J3-219ENST00000608621 RPL23AP62750 156 aaKnown RBP10.59□□□□□ -0.71
POLR2J3-219ENST00000608621 MADCAM1Q13477 382 aa10.59□□□□□ -0.71
POLR2J3-219ENST00000608621 LPCAT4Q643R3 524 aa10.59□□□□□ -0.71
POLR2J3-219ENST00000608621 C18orf65Q6ZTR6 163 aa10.59□□□□□ -0.71
POLR2J3-219ENST00000608621 SATL1Q86VE3 508 aa10.59□□□□□ -0.71
POLR2J3-219ENST00000608621 SYS1Q8N2H4 156 aa10.59□□□□□ -0.71
POLR2J3-219ENST00000608621 C5orf56Q8N8D9 126 aa10.59□□□□□ -0.71
POLR2J3-219ENST00000608621 PXT1Q8NFP0 134 aa10.59□□□□□ -0.71
POLR2J3-219ENST00000608621 OR51D1Q8NGF3 324 aa10.59□□□□□ -0.71
POLR2J3-219ENST00000608621 OR10K1Q8NGX5 313 aa10.59□□□□□ -0.71
POLR2J3-219ENST00000608621 OR5AK2Q8NH90 309 aa10.59□□□□□ -0.71
POLR2J3-219ENST00000608621 HAVCR2Q8TDQ0 301 aa10.59□□□□□ -0.71
POLR2J3-219ENST00000608621 MRGPRDQ8TDS7 321 aa10.59□□□□□ -0.71
POLR2J3-219ENST00000608621 CHPT1Q8WUD6 406 aa10.59□□□□□ -0.71
POLR2J3-219ENST00000608621 MYCBPQ99417 103 aaPredicted RBP10.59□□□□□ -0.71
POLR2J3-219ENST00000608621 GPER1Q99527 375 aa10.59□□□□□ -0.71
POLR2J3-219ENST00000608621 PDCD1LG2Q9BQ51 273 aa10.59□□□□□ -0.71
POLR2J3-219ENST00000608621 LINC00574Q9H8X3 128 aa10.59□□□□□ -0.71
POLR2J3-219ENST00000608621 AMBNQ9NP70 447 aa10.59□□□□□ -0.71
POLR2J3-219ENST00000608621 LINC00527Q9UJ94 153 aa10.59□□□□□ -0.71
POLR2J3-219ENST00000608621 DHDHQ9UQ10 334 aa10.59□□□□□ -0.71
POLR2J3-219ENST00000608621 TRAV39A0A0B4J263 110 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms