RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 OR2T8A6NH00 312 aa8.52□□□□□ -1.04
CSMD1-217ENST00000602723 RHBDL1O75783 438 aa8.52□□□□□ -1.04
CSMD1-217ENST00000602723 C21orf58P58505 322 aa8.52□□□□□ -1.04
CSMD1-217ENST00000602723 RAE1P78406 368 aaKnown RBP8.52□□□□□ -1.04
CSMD1-217ENST00000602723 ST6GAL2Q96JF0 529 aa8.52□□□□□ -1.04
CSMD1-217ENST00000602723 CORTO00230 105 aa8.52□□□□□ -1.05
CSMD1-217ENST00000602723 CD300LDQ6UXZ3 194 aa8.52□□□□□ -1.05
CSMD1-217ENST00000602723 TMEM251Q8N6I4 163 aa8.52□□□□□ -1.05
CSMD1-217ENST00000602723 ABHD1Q96SE0 405 aa8.52□□□□□ -1.05
CSMD1-217ENST00000602723 FUT9Q9Y231 359 aa8.52□□□□□ -1.05
CSMD1-217ENST00000602723 PCDHGA9Q9Y5G4 932 aaKnown RBP8.52□□□□□ -1.05
CSMD1-217ENST00000602723 TRGV8A0A0C4DH27 118 aa8.52□□□□□ -1.05
CSMD1-217ENST00000602723 MKRN2OSH3BPM6 223 aa8.52□□□□□ -1.05
CSMD1-217ENST00000602723 MPV17LQ2QL34 196 aa8.52□□□□□ -1.05
CSMD1-217ENST00000602723 RBM14Q96PK6 669 aaKnown RBP8.52□□□□□ -1.05
CSMD1-217ENST00000602723 M0R3E3 92 aa8.52□□□□□ -1.05
CSMD1-217ENST00000602723 GEMIN2O14893 280 aaKnown RBP8.52□□□□□ -1.05
CSMD1-217ENST00000602723 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.52□□□□□ -1.05
CSMD1-217ENST00000602723 TMEM140Q9NV12 185 aa8.52□□□□□ -1.05
CSMD1-217ENST00000602723 SBF1O95248 1867 aa8.52□□□□□ -1.05
CSMD1-217ENST00000602723 PPIHO43447 177 aaKnown RBP8.52□□□□□ -1.05
CSMD1-217ENST00000602723 CEACAM5P06731 702 aa8.52□□□□□ -1.05
CSMD1-217ENST00000602723 CTLA4P16410 223 aa8.52□□□□□ -1.05
CSMD1-217ENST00000602723 D2HGDHQ8N465 521 aa8.52□□□□□ -1.05
CSMD1-217ENST00000602723 MRGPRDQ8TDS7 321 aa8.52□□□□□ -1.05
CSMD1-217ENST00000602723 RAB24Q969Q5 203 aa8.52□□□□□ -1.05
CSMD1-217ENST00000602723 TMEM30AQ9NV96 361 aa8.52□□□□□ -1.05
CSMD1-217ENST00000602723 TRGV5A0A0B4J1U4 118 aa8.52□□□□□ -1.05
CSMD1-217ENST00000602723 OR4C46A6NHA9 309 aa8.52□□□□□ -1.05
CSMD1-217ENST00000602723 P2RY1P47900 373 aa8.52□□□□□ -1.05
CSMD1-217ENST00000602723 PABPC1L2AQ5JQF8 200 aa8.52□□□□□ -1.05
CSMD1-217ENST00000602723 GVQW1Q8N7I0 195 aa8.52□□□□□ -1.05
CSMD1-217ENST00000602723 PPIL1Q9Y3C6 166 aa8.52□□□□□ -1.05
CSMD1-217ENST00000602723 SHISA7A6NL88 538 aa8.52□□□□□ -1.05
CSMD1-217ENST00000602723 CLPPQ16740 277 aaPredicted RBP8.52□□□□□ -1.05
CSMD1-217ENST00000602723 GFRALQ6UXV0 394 aa8.52□□□□□ -1.05
CSMD1-217ENST00000602723 OR11G2Q8NGC1 345 aa8.52□□□□□ -1.05
CSMD1-217ENST00000602723 LCTP09848 1927 aa8.52□□□□□ -1.05
CSMD1-217ENST00000602723 CRYABP02511 175 aaKnown RBP8.51□□□□□ -1.05
CSMD1-217ENST00000602723 ZNF793Q6ZN11 406 aa8.51□□□□□ -1.05
CSMD1-217ENST00000602723 OR5B21A6NL26 309 aa8.51□□□□□ -1.05
CSMD1-217ENST00000602723 GABRA1P14867 456 aa8.51□□□□□ -1.05
CSMD1-217ENST00000602723 MVDP53602 400 aa8.51□□□□□ -1.05
CSMD1-217ENST00000602723 KLF3P57682 345 aaPredicted RBP8.51□□□□□ -1.05
CSMD1-217ENST00000602723 RPS4XP62701 263 aaKnown RBP8.51□□□□□ -1.05
CSMD1-217ENST00000602723 SSMEM1Q8WWF3 244 aa8.51□□□□□ -1.05
CSMD1-217ENST00000602723 TMEM218A2RU14 115 aa8.51□□□□□ -1.05
CSMD1-217ENST00000602723 IER3P46695 156 aa8.51□□□□□ -1.05
CSMD1-217ENST00000602723 MRPL54Q6P161 138 aaKnown RBP8.51□□□□□ -1.05
CSMD1-217ENST00000602723 ZNF683Q8IZ20 524 aa8.51□□□□□ -1.05
CSMD1-217ENST00000602723 FAM117AQ9C073 453 aa8.51□□□□□ -1.05
CSMD1-217ENST00000602723 SUCLG1P53597 346 aaKnown RBP8.51□□□□□ -1.05
CSMD1-217ENST00000602723 ZNF141Q15928 474 aa8.51□□□□□ -1.05
CSMD1-217ENST00000602723 CA5BP1Q8WTZ4 195 aa8.51□□□□□ -1.05
CSMD1-217ENST00000602723 MEGF10Q96KG7 1140 aa8.51□□□□□ -1.05
CSMD1-217ENST00000602723 PAPPA2Q9BXP8 1791 aa8.51□□□□□ -1.05
CSMD1-217ENST00000602723 TCF21O43680 179 aa8.51□□□□□ -1.05
CSMD1-217ENST00000602723 IGF2P01344 180 aa8.51□□□□□ -1.05
CSMD1-217ENST00000602723 CCL7P80098 99 aa8.51□□□□□ -1.05
CSMD1-217ENST00000602723 RPS4Y2Q8TD47 263 aa8.51□□□□□ -1.05
CSMD1-217ENST00000602723 PITPNC1Q9UKF7 332 aa8.51□□□□□ -1.05
CSMD1-217ENST00000602723 IGHV3-43A0A0B4J1X8 118 aa8.51□□□□□ -1.05
CSMD1-217ENST00000602723 DIRC3C9JPN6 131 aa8.51□□□□□ -1.05
CSMD1-217ENST00000602723 SRSF10O75494 262 aaKnown RBP8.51□□□□□ -1.05
CSMD1-217ENST00000602723 PGA4P0DJD7 388 aa8.51□□□□□ -1.05
CSMD1-217ENST00000602723 PGA5P0DJD9 388 aa8.51□□□□□ -1.05
CSMD1-217ENST00000602723 IGHV3-43DP0DP04 118 aa8.51□□□□□ -1.05
CSMD1-217ENST00000602723 FAM109BQ6ICB4 259 aaPredicted RBP8.51□□□□□ -1.05
CSMD1-217ENST00000602723 FGF14Q92915 247 aa8.51□□□□□ -1.05
CSMD1-217ENST00000602723 COA4Q9NYJ1 87 aa8.51□□□□□ -1.05
CSMD1-217ENST00000602723 VAX2Q9UIW0 290 aa8.51□□□□□ -1.05
CSMD1-217ENST00000602723 C3orf80F5H4A9 247 aa8.51□□□□□ -1.05
CSMD1-217ENST00000602723 KLF7O75840 302 aaPredicted RBP8.51□□□□□ -1.05
CSMD1-217ENST00000602723 CDKN2AP42771 156 aaKnown RBP8.51□□□□□ -1.05
CSMD1-217ENST00000602723 CEBPDP49716 269 aaPredicted RBP8.51□□□□□ -1.05
CSMD1-217ENST00000602723 SURF2Q15527 256 aaPredicted RBP8.51□□□□□ -1.05
CSMD1-217ENST00000602723 TMEM65Q6PI78 240 aa8.51□□□□□ -1.05
CSMD1-217ENST00000602723 MSRB3Q8IXL7 192 aa8.51□□□□□ -1.05
CSMD1-217ENST00000602723 AMDHD2Q9Y303 409 aa8.51□□□□□ -1.05
CSMD1-217ENST00000602723 hADV38S2A0JD32 116 aa8.51□□□□□ -1.05
CSMD1-217ENST00000602723 PLPP3O14495 311 aa8.51□□□□□ -1.05
CSMD1-217ENST00000602723 CTSDP07339 412 aaPredicted RBP8.51□□□□□ -1.05
CSMD1-217ENST00000602723 PRR35P0CG20 571 aa8.51□□□□□ -1.05
CSMD1-217ENST00000602723 B4GALNT1Q00973 533 aa8.51□□□□□ -1.05
CSMD1-217ENST00000602723 RSPO2Q6UXX9 243 aaPredicted RBP8.51□□□□□ -1.05
CSMD1-217ENST00000602723 SPNS2Q8IVW8 549 aa8.51□□□□□ -1.05
CSMD1-217ENST00000602723 TUSC5Q8IXB3 177 aa8.51□□□□□ -1.05
CSMD1-217ENST00000602723 OR1N2Q8NGR9 330 aa8.51□□□□□ -1.05
CSMD1-217ENST00000602723 ZNF707Q96C28 371 aaPredicted RBP8.51□□□□□ -1.05
CSMD1-217ENST00000602723 LRRC61Q9BV99 259 aa8.51□□□□□ -1.05
CSMD1-217ENST00000602723 PRDM7Q9NQW5 492 aa8.51□□□□□ -1.05
CSMD1-217ENST00000602723 EDIL3O43854 480 aa8.51□□□□□ -1.05
CSMD1-217ENST00000602723 CRHP06850 196 aa8.51□□□□□ -1.05
CSMD1-217ENST00000602723 CLEC1BQ9P126 229 aa8.51□□□□□ -1.05
CSMD1-217ENST00000602723 A0A1W2PR80 420 aa8.5□□□□□ -1.05
CSMD1-217ENST00000602723 ANKRD20A5PA0PJZ0 165 aa8.5□□□□□ -1.05
CSMD1-217ENST00000602723 K7EQS6 105 aa8.5□□□□□ -1.05
CSMD1-217ENST00000602723 HAND1O96004 215 aa8.5□□□□□ -1.05
CSMD1-217ENST00000602723 COL8A1P27658 744 aa8.5□□□□□ -1.05
CSMD1-217ENST00000602723 ZNF343Q6P1L6 599 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms