RNA–Protein interactions for RNA: ENST00000599846.5

ARHGEF1-219, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ARHGEF1, Length 3,393 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-219ENST00000599846 IFNA4P05014 189 aa13.65□□□□□ -0.22
ARHGEF1-219ENST00000599846 TAGLN2P37802 199 aaKnown RBP13.65□□□□□ -0.22
ARHGEF1-219ENST00000599846 UBE2KP61086 200 aa13.65□□□□□ -0.22
ARHGEF1-219ENST00000599846 CCL20P78556 96 aa13.65□□□□□ -0.22
ARHGEF1-219ENST00000599846 PRDX4Q13162 271 aa13.65□□□□□ -0.22
ARHGEF1-219ENST00000599846 TCEAL3Q969E4 200 aa13.65□□□□□ -0.22
ARHGEF1-219ENST00000599846 SF3B5Q9BWJ5 86 aaKnown RBP13.65□□□□□ -0.22
ARHGEF1-219ENST00000599846 POMT1Q9Y6A1 747 aa13.65□□□□□ -0.22
ARHGEF1-219ENST00000599846 RAB5AP20339 215 aa13.65□□□□□ -0.22
ARHGEF1-219ENST00000599846 S100GP29377 79 aa13.65□□□□□ -0.22
ARHGEF1-219ENST00000599846 TLE1Q04724 770 aa13.65□□□□□ -0.22
ARHGEF1-219ENST00000599846 TCEAL6Q6IPX3 200 aa13.65□□□□□ -0.22
ARHGEF1-219ENST00000599846 CPEB3Q8NE35 698 aaKnown RBP13.65□□□□□ -0.22
ARHGEF1-219ENST00000599846 M1APQ8TC57 530 aa13.65□□□□□ -0.22
ARHGEF1-219ENST00000599846 HS3ST6Q96QI5 342 aa13.65□□□□□ -0.22
ARHGEF1-219ENST00000599846 COA4Q9NYJ1 87 aa13.65□□□□□ -0.22
ARHGEF1-219ENST00000599846 LRFN1Q9P244 771 aa13.65□□□□□ -0.22
ARHGEF1-219ENST00000599846 KCNS2Q9ULS6 477 aa13.65□□□□□ -0.22
ARHGEF1-219ENST00000599846 ACAA1P09110 424 aaPredicted RBP13.65□□□□□ -0.23
ARHGEF1-219ENST00000599846 DYNLT3P51808 116 aa13.65□□□□□ -0.23
ARHGEF1-219ENST00000599846 ZNF154Q13106 437 aa13.65□□□□□ -0.23
ARHGEF1-219ENST00000599846 LINC00696Q6ZRV3 163 aa13.65□□□□□ -0.23
ARHGEF1-219ENST00000599846 MCEMP1Q8IX19 187 aa13.65□□□□□ -0.23
ARHGEF1-219ENST00000599846 CCDC54Q8NEL0 328 aa13.65□□□□□ -0.23
ARHGEF1-219ENST00000599846 PSMF1Q92530 271 aa13.65□□□□□ -0.23
ARHGEF1-219ENST00000599846 SLC25A31Q9H0C2 315 aa13.65□□□□□ -0.23
ARHGEF1-219ENST00000599846 STRAPQ9Y3F4 350 aaKnown RBP13.65□□□□□ -0.23
ARHGEF1-219ENST00000599846 hCG_38984A0A1B0GV85 526 aa13.64□□□□□ -0.23
ARHGEF1-219ENST00000599846 CHST1O43916 411 aa13.64□□□□□ -0.23
ARHGEF1-219ENST00000599846 HIST1H3AP68431 136 aa13.64□□□□□ -0.23
ARHGEF1-219ENST00000599846 IGFBP7Q16270 282 aa13.64□□□□□ -0.23
ARHGEF1-219ENST00000599846 ZNF239Q16600 458 aaKnown RBP13.64□□□□□ -0.23
ARHGEF1-219ENST00000599846 ZNF674Q2M3X9 581 aa13.64□□□□□ -0.23
ARHGEF1-219ENST00000599846 SPATA46Q5T0L3 261 aa13.64□□□□□ -0.23
ARHGEF1-219ENST00000599846 HIST2H3PS2Q5TEC6 136 aa13.64□□□□□ -0.23
ARHGEF1-219ENST00000599846 ZNF818PQ6ZRF7 136 aa13.64□□□□□ -0.23
ARHGEF1-219ENST00000599846 HIST2H3AQ71DI3 136 aa13.64□□□□□ -0.23
ARHGEF1-219ENST00000599846 C17orf78Q8N4C9 275 aa13.64□□□□□ -0.23
ARHGEF1-219ENST00000599846 ZDHHC8Q9ULC8 765 aa13.64□□□□□ -0.23
ARHGEF1-219ENST00000599846 IGSF23A1L1A6 192 aa13.64□□□□□ -0.23
ARHGEF1-219ENST00000599846 SLC34A2O95436 690 aa13.64□□□□□ -0.23
ARHGEF1-219ENST00000599846 EDN3P14138 238 aa13.64□□□□□ -0.23
ARHGEF1-219ENST00000599846 COL6A3P12111 3177 aa13.64□□□□□ -0.23
ARHGEF1-219ENST00000599846 LOC102723996A0A087X1L8 192 aa13.63□□□□□ -0.23
ARHGEF1-219ENST00000599846 HEXAP06865 529 aa13.63□□□□□ -0.23
ARHGEF1-219ENST00000599846 PLGLB1Q02325 96 aa13.63□□□□□ -0.23
ARHGEF1-219ENST00000599846 THNSL2Q86YJ6 484 aa13.63□□□□□ -0.23
ARHGEF1-219ENST00000599846 TMEM252Q8N6L7 170 aa13.63□□□□□ -0.23
ARHGEF1-219ENST00000599846 IL22RA1Q8N6P7 574 aa13.63□□□□□ -0.23
ARHGEF1-219ENST00000599846 DMBX1Q8NFW5 382 aa13.63□□□□□ -0.23
ARHGEF1-219ENST00000599846 KCNE4Q8WWG9 221 aa13.63□□□□□ -0.23
ARHGEF1-219ENST00000599846 THOC3Q96J01 351 aaKnown RBP13.63□□□□□ -0.23
ARHGEF1-219ENST00000599846 C18orf12Q96KH6 178 aa13.63□□□□□ -0.23
ARHGEF1-219ENST00000599846 C12orf49Q9H741 205 aa13.63□□□□□ -0.23
ARHGEF1-219ENST00000599846 PLEKHF2Q9H8W4 249 aa13.63□□□□□ -0.23
ARHGEF1-219ENST00000599846 ZFP92A6NM28 416 aa13.63□□□□□ -0.23
ARHGEF1-219ENST00000599846 TERTO14746 1132 aaKnown RBP13.63□□□□□ -0.23
ARHGEF1-219ENST00000599846 NGFP01138 241 aa13.63□□□□□ -0.23
ARHGEF1-219ENST00000599846 FOXG1P55316 489 aaPredicted RBP13.63□□□□□ -0.23
ARHGEF1-219ENST00000599846 C3AR1Q16581 482 aa13.63□□□□□ -0.23
ARHGEF1-219ENST00000599846 TUSC5Q8IXB3 177 aa13.63□□□□□ -0.23
ARHGEF1-219ENST00000599846 BOD1Q96IK1 185 aa13.63□□□□□ -0.23
ARHGEF1-219ENST00000599846 GINS3Q9BRX5 216 aa13.63□□□□□ -0.23
ARHGEF1-219ENST00000599846 ZNF716A6NP11 495 aa13.63□□□□□ -0.23
ARHGEF1-219ENST00000599846 TRDCB7Z8K6 153 aa13.63□□□□□ -0.23
ARHGEF1-219ENST00000599846 RAB5CP51148 216 aa13.63□□□□□ -0.23
ARHGEF1-219ENST00000599846 RPL23AP62750 156 aaKnown RBP13.63□□□□□ -0.23
ARHGEF1-219ENST00000599846 PLP2Q04941 152 aa13.63□□□□□ -0.23
ARHGEF1-219ENST00000599846 PDZD11Q5EBL8 140 aa13.63□□□□□ -0.23
ARHGEF1-219ENST00000599846 TMEM211Q6ICI0 200 aa13.63□□□□□ -0.23
ARHGEF1-219ENST00000599846 ZNF100Q8IYN0 542 aa13.63□□□□□ -0.23
ARHGEF1-219ENST00000599846 TMEM222Q9H0R3 208 aa13.63□□□□□ -0.23
ARHGEF1-219ENST00000599846 IGKV1D-13A0A0B4J2D9 117 aa13.62□□□□□ -0.23
ARHGEF1-219ENST00000599846 PDGFBP01127 241 aaPredicted RBP13.62□□□□□ -0.23
ARHGEF1-219ENST00000599846 IGKV1-13P0DP09 117 aa13.62□□□□□ -0.23
ARHGEF1-219ENST00000599846 IAPPP10997 89 aa13.62□□□□□ -0.23
ARHGEF1-219ENST00000599846 RAB2AP61019 212 aa13.62□□□□□ -0.23
ARHGEF1-219ENST00000599846 TMEM267Q0VDI3 215 aaPredicted RBP13.62□□□□□ -0.23
ARHGEF1-219ENST00000599846 NTNG2Q96CW9 530 aa13.62□□□□□ -0.23
ARHGEF1-219ENST00000599846 DEPPQ9NTK1 212 aa13.62□□□□□ -0.23
ARHGEF1-219ENST00000599846 PLA2G3Q9NZ20 509 aa13.62□□□□□ -0.23
ARHGEF1-219ENST00000599846 GNG13Q9P2W3 67 aa13.62□□□□□ -0.23
ARHGEF1-219ENST00000599846 CEP192Q8TEP8 1941 aa13.62□□□□□ -0.23
ARHGEF1-219ENST00000599846 RBFOX3A6NFN3 312 aa13.62□□□□□ -0.23
ARHGEF1-219ENST00000599846 SYNGR4O95473 234 aa13.62□□□□□ -0.23
ARHGEF1-219ENST00000599846 IFNA5P01569 189 aa13.62□□□□□ -0.23
ARHGEF1-219ENST00000599846 DUSP3P51452 185 aaPredicted RBP13.62□□□□□ -0.23
ARHGEF1-219ENST00000599846 NDUFA6P56556 154 aa13.62□□□□□ -0.23
ARHGEF1-219ENST00000599846 SRPXP78539 464 aa13.62□□□□□ -0.23
ARHGEF1-219ENST00000599846 KIAA0141Q14154 515 aaPredicted RBP13.62□□□□□ -0.23
ARHGEF1-219ENST00000599846 DCAF12Q5T6F0 453 aa13.62□□□□□ -0.23
ARHGEF1-219ENST00000599846 LCN15Q6UWW0 184 aa13.62□□□□□ -0.23
ARHGEF1-219ENST00000599846 TCTEX1D2Q8WW35 142 aa13.62□□□□□ -0.23
ARHGEF1-219ENST00000599846 HES7Q9BYE0 225 aa13.62□□□□□ -0.23
ARHGEF1-219ENST00000599846 ERRFI1Q9UJM3 462 aaPredicted RBP13.62□□□□□ -0.23
ARHGEF1-219ENST00000599846 PPP1R3CQ9UQK1 317 aa13.62□□□□□ -0.23
ARHGEF1-219ENST00000599846 SYNGR1O43759 233 aa13.62□□□□□ -0.23
ARHGEF1-219ENST00000599846 IFNA17P01571 189 aa13.62□□□□□ -0.23
ARHGEF1-219ENST00000599846 CELA3AP09093 270 aa13.62□□□□□ -0.23
ARHGEF1-219ENST00000599846 GGNQ86UU5 652 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 194.7 ms