RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, human

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-223	ENST00000599223	FAM172BP	A6NC97	362 aa		11.74	□□□□□ -0.53
IRF3-223	ENST00000599223	SLC22A1	O15245	554 aa		11.74	□□□□□ -0.53
IRF3-223	ENST00000599223	AIRE	O43918	545 aa		11.74	□□□□□ -0.53
IRF3-223	ENST00000599223	IGLL1	P15814	213 aa		11.74	□□□□□ -0.53
IRF3-223	ENST00000599223	GABRR1	P24046	479 aa		11.74	□□□□□ -0.53
IRF3-223	ENST00000599223	GDNF	P39905	211 aa		11.74	□□□□□ -0.53
IRF3-223	ENST00000599223	OR12D2	P58182	307 aa		11.74	□□□□□ -0.53
IRF3-223	ENST00000599223	TAS2R43	P59537	309 aa		11.74	□□□□□ -0.53
IRF3-223	ENST00000599223	ARSJ	Q5FYB0	599 aa	Predicted RBP	11.74	□□□□□ -0.53
IRF3-223	ENST00000599223	UTF1	Q5T230	341 aa		11.74	□□□□□ -0.53
IRF3-223	ENST00000599223	MINOS1	Q5TGZ0	78 aa		11.74	□□□□□ -0.53
IRF3-223	ENST00000599223	PRAMEF5	Q5TYX0	476 aa		11.74	□□□□□ -0.53
IRF3-223	ENST00000599223	C10orf99	Q6UWK7	81 aa		11.74	□□□□□ -0.53
IRF3-223	ENST00000599223	RNF144B	Q7Z419	303 aa		11.74	□□□□□ -0.53
IRF3-223	ENST00000599223	EGFL6	Q8IUX8	553 aa		11.74	□□□□□ -0.53
IRF3-223	ENST00000599223	RDH10	Q8IZV5	341 aa		11.74	□□□□□ -0.53
IRF3-223	ENST00000599223	DTX3	Q8N9I9	347 aa		11.74	□□□□□ -0.53
IRF3-223	ENST00000599223	NDNF	Q8TB73	568 aa		11.74	□□□□□ -0.53
IRF3-223	ENST00000599223	HAVCR2	Q8TDQ0	301 aa		11.74	□□□□□ -0.53
IRF3-223	ENST00000599223	YIPF6	Q96EC8	236 aa		11.74	□□□□□ -0.53
IRF3-223	ENST00000599223	ADAT3	Q96EY9	351 aa	Predicted RBP	11.74	□□□□□ -0.53
IRF3-223	ENST00000599223	TSC22D3	Q99576	134 aa		11.74	□□□□□ -0.53
IRF3-223	ENST00000599223	CLEC7A	Q9BXN2	247 aa		11.74	□□□□□ -0.53
IRF3-223	ENST00000599223	TMEM133	Q9H2Q1	129 aa		11.74	□□□□□ -0.53
IRF3-223	ENST00000599223	MINOS1-NBL1	R4GNA1	71 aa		11.74	□□□□□ -0.53
IRF3-223	ENST00000599223	TRBV2	A0A0J9YWF9	115 aa		11.73	□□□□□ -0.53
IRF3-223	ENST00000599223	hADV38S2	A0JD32	116 aa		11.73	□□□□□ -0.53
IRF3-223	ENST00000599223	SH2D7	A6NKC9	451 aa	Predicted RBP	11.73	□□□□□ -0.53
IRF3-223	ENST00000599223		H3BMQ9	156 aa		11.73	□□□□□ -0.53
IRF3-223	ENST00000599223		J3QRE1	110 aa		11.73	□□□□□ -0.53
IRF3-223	ENST00000599223	PEX14	O75381	377 aa		11.73	□□□□□ -0.53
IRF3-223	ENST00000599223	GATB	O75879	557 aa	Known RBP	11.73	□□□□□ -0.53
IRF3-223	ENST00000599223	GABARAP	O95166	117 aa		11.73	□□□□□ -0.53
IRF3-223	ENST00000599223	LIMS3	P0CW19	117 aa		11.73	□□□□□ -0.53
IRF3-223	ENST00000599223	LIMS4	P0CW20	117 aa		11.73	□□□□□ -0.53
IRF3-223	ENST00000599223	PSMA1	P25786	263 aa	Known RBP	11.73	□□□□□ -0.53
IRF3-223	ENST00000599223	POU3F4	P49335	361 aa		11.73	□□□□□ -0.53
IRF3-223	ENST00000599223	FUT6	P51993	359 aa		11.73	□□□□□ -0.53
IRF3-223	ENST00000599223	CD83	Q01151	205 aa		11.73	□□□□□ -0.53
IRF3-223	ENST00000599223	BDH1	Q02338	343 aa		11.73	□□□□□ -0.53
IRF3-223	ENST00000599223	FAM220A	Q7Z4H9	259 aa		11.73	□□□□□ -0.53
IRF3-223	ENST00000599223	OR5AU1	Q8NGC0	362 aa		11.73	□□□□□ -0.53
IRF3-223	ENST00000599223	LSM2	Q9Y333	95 aa	Known RBP	11.73	□□□□□ -0.53
IRF3-223	ENST00000599223	IGKV1-12	A0A0C4DH73	117 aa		11.72	□□□□□ -0.53
IRF3-223	ENST00000599223	METTL15	A6NJ78	407 aa		11.72	□□□□□ -0.53
IRF3-223	ENST00000599223	SIRPB1	O00241	398 aa		11.72	□□□□□ -0.53
IRF3-223	ENST00000599223	IGKV1D-12	P01611	117 aa		11.72	□□□□□ -0.53
IRF3-223	ENST00000599223	AMY1A	P04745	511 aa		11.72	□□□□□ -0.53
IRF3-223	ENST00000599223	AMY2A	P04746	511 aa		11.72	□□□□□ -0.53
IRF3-223	ENST00000599223	GBX2	P52951	348 aa	Predicted RBP	11.72	□□□□□ -0.53
IRF3-223	ENST00000599223	P2RX3	P56373	397 aa		11.72	□□□□□ -0.53
IRF3-223	ENST00000599223	ZNF85	Q03923	595 aa		11.72	□□□□□ -0.53
IRF3-223	ENST00000599223	MRPL28	Q13084	256 aa	Known RBP	11.72	□□□□□ -0.53
IRF3-223	ENST00000599223	TP53I3	Q53FA7	332 aa		11.72	□□□□□ -0.53
IRF3-223	ENST00000599223	BORCS8	Q96FH0	119 aa		11.72	□□□□□ -0.53
IRF3-223	ENST00000599223	OPALIN	Q96PE5	141 aa		11.72	□□□□□ -0.53
IRF3-223	ENST00000599223	RYR3	Q15413	4870 aa		11.71	□□□□□ -0.53
IRF3-223	ENST00000599223		J3QLW9	94 aa		11.71	□□□□□ -0.53
IRF3-223	ENST00000599223		K7EIL1	84 aa		11.71	□□□□□ -0.53
IRF3-223	ENST00000599223	MPIG6B	O95866	241 aa		11.71	□□□□□ -0.53
IRF3-223	ENST00000599223	CPE	P16870	476 aa		11.71	□□□□□ -0.53
IRF3-223	ENST00000599223	ZNF19	P17023	458 aa		11.71	□□□□□ -0.53
IRF3-223	ENST00000599223	PRKACA	P17612	351 aa		11.71	□□□□□ -0.53
IRF3-223	ENST00000599223	CD33	P20138	364 aa		11.71	□□□□□ -0.53
IRF3-223	ENST00000599223	AZGP1	P25311	298 aa	Known RBP	11.71	□□□□□ -0.53
IRF3-223	ENST00000599223	HTR1D	P28221	377 aa		11.71	□□□□□ -0.53
IRF3-223	ENST00000599223	ZNF146	Q15072	292 aa		11.71	□□□□□ -0.53
IRF3-223	ENST00000599223	OR2G6	Q5TZ20	316 aa		11.71	□□□□□ -0.53
IRF3-223	ENST00000599223	KCTD20	Q7Z5Y7	419 aa		11.71	□□□□□ -0.53
IRF3-223	ENST00000599223	TRAPPC6B	Q86SZ2	158 aa		11.71	□□□□□ -0.53
IRF3-223	ENST00000599223	FAM58A	Q8N1B3	248 aa		11.71	□□□□□ -0.53
IRF3-223	ENST00000599223	SYS1	Q8N2H4	156 aa		11.71	□□□□□ -0.53
IRF3-223	ENST00000599223	WFDC9	Q8NEX5	89 aa		11.71	□□□□□ -0.53
IRF3-223	ENST00000599223	OR10AC1	Q8NH08	325 aa		11.71	□□□□□ -0.53
IRF3-223	ENST00000599223	RFT1	Q96AA3	541 aa		11.71	□□□□□ -0.53
IRF3-223	ENST00000599223	SEBOX	Q9HB31	216 aa	Predicted RBP	11.71	□□□□□ -0.53
IRF3-223	ENST00000599223	ZNF286A	Q9HBT8	521 aa		11.71	□□□□□ -0.53
IRF3-223	ENST00000599223	NDUFB11	Q9NX14	153 aa		11.71	□□□□□ -0.53
IRF3-223	ENST00000599223	BABAM2	Q9NXR7	383 aa		11.71	□□□□□ -0.53
IRF3-223	ENST00000599223	GNG8	Q9UK08	70 aa		11.71	□□□□□ -0.53
IRF3-223	ENST00000599223	SSR3	Q9UNL2	185 aa		11.71	□□□□□ -0.53
IRF3-223	ENST00000599223	LOC100506127	A0A0U1RQW1	187 aa		11.7	□□□□□ -0.54
IRF3-223	ENST00000599223	MGST3	O14880	152 aa		11.7	□□□□□ -0.54
IRF3-223	ENST00000599223	SULT1C4	O75897	302 aa		11.7	□□□□□ -0.54
IRF3-223	ENST00000599223	OR2H2	O95918	312 aa		11.7	□□□□□ -0.54
IRF3-223	ENST00000599223	IGLV1-47	P01700	117 aa		11.7	□□□□□ -0.54
IRF3-223	ENST00000599223	ALDOB	P05062	364 aa		11.7	□□□□□ -0.54
IRF3-223	ENST00000599223	LPL	P06858	475 aa		11.7	□□□□□ -0.54
IRF3-223	ENST00000599223	UBC	P0CG48	685 aa	Known RBP	11.7	□□□□□ -0.54
IRF3-223	ENST00000599223	GADD45A	P24522	165 aa		11.7	□□□□□ -0.54
IRF3-223	ENST00000599223	CDK2	P24941	298 aa		11.7	□□□□□ -0.54
IRF3-223	ENST00000599223	SERPINB10	P48595	397 aa		11.7	□□□□□ -0.54
IRF3-223	ENST00000599223	RBP2	P50120	134 aa		11.7	□□□□□ -0.54
IRF3-223	ENST00000599223	NANOS3	P60323	173 aa	Known RBP	11.7	□□□□□ -0.54
IRF3-223	ENST00000599223	GPR50	Q13585	617 aa		11.7	□□□□□ -0.54
IRF3-223	ENST00000599223	TPBG	Q13641	420 aa		11.7	□□□□□ -0.54
IRF3-223	ENST00000599223	TRAM1	Q15629	374 aa		11.7	□□□□□ -0.54
IRF3-223	ENST00000599223	ABCA11P	Q4W5N1	156 aa		11.7	□□□□□ -0.54
IRF3-223	ENST00000599223	LIPK	Q5VXJ0	399 aa		11.7	□□□□□ -0.54
IRF3-223	ENST00000599223	C11orf87	Q6NUJ2	197 aa		11.7	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms