RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 KCNK15Q9H427 330 aa16.13■□□□□ 0.17
SHKBP1-214ENST00000597396 SPACA1Q9HBV2 294 aa16.13■□□□□ 0.17
SHKBP1-214ENST00000597396 ZNF581Q9P0T4 197 aa16.13■□□□□ 0.17
SHKBP1-214ENST00000597396 FBN1P35555 2871 aaKnown RBP16.13■□□□□ 0.17
SHKBP1-214ENST00000597396 TRGV10A0A0A0MS01 117 aa16.12■□□□□ 0.17
SHKBP1-214ENST00000597396 IGHV1-69DA0A0B4J2H0 117 aa16.12■□□□□ 0.17
SHKBP1-214ENST00000597396 SHISA3A0PJX4 238 aa16.12■□□□□ 0.17
SHKBP1-214ENST00000597396 ODAMA1E959 279 aa16.12■□□□□ 0.17
SHKBP1-214ENST00000597396 FAM90A10PA6NDY2 464 aa16.12■□□□□ 0.17
SHKBP1-214ENST00000597396 FAM90A18PA6NE21 464 aa16.12■□□□□ 0.17
SHKBP1-214ENST00000597396 FAM90A16PA6NEW6 464 aa16.12■□□□□ 0.17
SHKBP1-214ENST00000597396 FAM90A20PA6NIJ5 464 aa16.12■□□□□ 0.17
SHKBP1-214ENST00000597396 FAM90A8PA6NJQ4 464 aa16.12■□□□□ 0.17
SHKBP1-214ENST00000597396 FAM90A7PA6NKC0 464 aa16.12■□□□□ 0.17
SHKBP1-214ENST00000597396 TRIM64CA6NLI5 447 aa16.12■□□□□ 0.17
SHKBP1-214ENST00000597396 FAM90A22PA8MWA6 464 aa16.12■□□□□ 0.17
SHKBP1-214ENST00000597396 FAM90A12PA8MX19 464 aa16.12■□□□□ 0.17
SHKBP1-214ENST00000597396 FAM90A5PA8MXJ8 464 aa16.12■□□□□ 0.17
SHKBP1-214ENST00000597396 FAM90A23PA8MXZ1 464 aa16.12■□□□□ 0.17
SHKBP1-214ENST00000597396 IGHV1-69P01742 117 aa16.12■□□□□ 0.17
SHKBP1-214ENST00000597396 FAM90A15PP0C7V4 464 aa16.12■□□□□ 0.17
SHKBP1-214ENST00000597396 FAM90A13PP0C7W8 464 aa16.12■□□□□ 0.17
SHKBP1-214ENST00000597396 FAM90A14PP0C7W9 464 aa16.12■□□□□ 0.17
SHKBP1-214ENST00000597396 FAM90A24PP0C7X0 464 aa16.12■□□□□ 0.17
SHKBP1-214ENST00000597396 VSIG8P0DPA2 414 aa16.12■□□□□ 0.17
SHKBP1-214ENST00000597396 ARSBP15848 533 aa16.12■□□□□ 0.17
SHKBP1-214ENST00000597396 JUNBP17275 347 aaPredicted RBP16.12■□□□□ 0.17
SHKBP1-214ENST00000597396 OR10A3P58181 314 aa16.12■□□□□ 0.17
SHKBP1-214ENST00000597396 GUCA2AQ02747 115 aa16.12■□□□□ 0.17
SHKBP1-214ENST00000597396 KLRD1Q13241 179 aa16.12■□□□□ 0.17
SHKBP1-214ENST00000597396 HES5Q5TA89 166 aa16.12■□□□□ 0.17
SHKBP1-214ENST00000597396 RUSC1-AS1Q66K80 236 aa16.12■□□□□ 0.17
SHKBP1-214ENST00000597396 OR10K2Q6IF99 312 aa16.12■□□□□ 0.17
SHKBP1-214ENST00000597396 METAP1DQ6UB28 335 aaPredicted RBP16.12■□□□□ 0.17
SHKBP1-214ENST00000597396 TCF23Q7RTU1 214 aa16.12■□□□□ 0.17
SHKBP1-214ENST00000597396 BCL6BQ8N143 479 aaPredicted RBP16.12■□□□□ 0.17
SHKBP1-214ENST00000597396 KCTD7Q96MP8 289 aa16.12■□□□□ 0.17
SHKBP1-214ENST00000597396 UBE2J1Q9Y385 318 aaPredicted RBP16.12■□□□□ 0.17
SHKBP1-214ENST00000597396 STAB1Q9NY15 2570 aa16.11■□□□□ 0.17
SHKBP1-214ENST00000597396 TCF21O43680 179 aa16.11■□□□□ 0.17
SHKBP1-214ENST00000597396 DLX6P56179 175 aa16.11■□□□□ 0.17
SHKBP1-214ENST00000597396 CLDN12P56749 244 aa16.11■□□□□ 0.17
SHKBP1-214ENST00000597396 ERVFRD-1P60508 538 aa16.11■□□□□ 0.17
SHKBP1-214ENST00000597396 TIMM50Q3ZCQ8 353 aa16.11■□□□□ 0.17
SHKBP1-214ENST00000597396 PLPPR1Q8TBJ4 325 aa16.11■□□□□ 0.17
SHKBP1-214ENST00000597396 SLC25A28Q96A46 364 aa16.11■□□□□ 0.17
SHKBP1-214ENST00000597396 UNKLQ9H9P5 680 aaKnown RBP16.11■□□□□ 0.17
SHKBP1-214ENST00000597396 C17orf98A8MV24 154 aa16.1■□□□□ 0.17
SHKBP1-214ENST00000597396 MCRIP1C9JLW8 97 aa16.1■□□□□ 0.17
SHKBP1-214ENST00000597396 RNASEK-C17orf49H0YIS7 233 aa16.1■□□□□ 0.17
SHKBP1-214ENST00000597396 H3BUI4 141 aa16.1■□□□□ 0.17
SHKBP1-214ENST00000597396 SMIM18P0DKX4 95 aa16.1■□□□□ 0.17
SHKBP1-214ENST00000597396 RPS27AP62979 156 aaKnown RBP16.1■□□□□ 0.17
SHKBP1-214ENST00000597396 RAB12Q6IQ22 244 aa16.1■□□□□ 0.17
SHKBP1-214ENST00000597396 RBMS3Q6XE24 437 aaKnown RBP16.1■□□□□ 0.17
SHKBP1-214ENST00000597396 ZNF782Q6ZMW2 699 aaPredicted RBP16.1■□□□□ 0.17
SHKBP1-214ENST00000597396 C9orf139Q6ZV77 190 aa16.1■□□□□ 0.17
SHKBP1-214ENST00000597396 OR2W3Q7Z3T1 314 aa16.1■□□□□ 0.17
SHKBP1-214ENST00000597396 OR51D1Q8NGF3 324 aa16.1■□□□□ 0.17
SHKBP1-214ENST00000597396 TNFRSF14Q92956 283 aa16.1■□□□□ 0.17
SHKBP1-214ENST00000597396 FAM3DQ96BQ1 224 aa16.1■□□□□ 0.17
SHKBP1-214ENST00000597396 HEXA-AS1Q9H8Q6 139 aa16.1■□□□□ 0.17
SHKBP1-214ENST00000597396 OR6C3Q9NZP0 311 aa16.1■□□□□ 0.17
SHKBP1-214ENST00000597396 STEAP1Q9UHE8 339 aa16.1■□□□□ 0.17
SHKBP1-214ENST00000597396 KIF25Q9UIL4 384 aa16.1■□□□□ 0.17
SHKBP1-214ENST00000597396 PEX16Q9Y5Y5 336 aa16.1■□□□□ 0.17
SHKBP1-214ENST00000597396 MEIKINA0A087WXM9 373 aa16.09■□□□□ 0.17
SHKBP1-214ENST00000597396 A0A1W2PRD5 423 aa16.09■□□□□ 0.17
SHKBP1-214ENST00000597396 A0A1W2PRF3 423 aa16.09■□□□□ 0.17
SHKBP1-214ENST00000597396 A0A1W2PRM7 423 aa16.09■□□□□ 0.17
SHKBP1-214ENST00000597396 SMIM30A4D0T7 59 aa16.09■□□□□ 0.17
SHKBP1-214ENST00000597396 TMEM14DPA8MWL7 114 aa16.09■□□□□ 0.17
SHKBP1-214ENST00000597396 RBP4P02753 201 aa16.09■□□□□ 0.17
SHKBP1-214ENST00000597396 FUT3P21217 361 aa16.09■□□□□ 0.17
SHKBP1-214ENST00000597396 GLP1RP43220 463 aa16.09■□□□□ 0.17
SHKBP1-214ENST00000597396 UNC119Q13432 240 aa16.09■□□□□ 0.17
SHKBP1-214ENST00000597396 RBM39Q14498 530 aaKnown RBP16.09■□□□□ 0.17
SHKBP1-214ENST00000597396 RSBN1Q5VWQ0 802 aaPredicted RBP16.09■□□□□ 0.17
SHKBP1-214ENST00000597396 BRICD5Q6PL45 260 aa16.09■□□□□ 0.17
SHKBP1-214ENST00000597396 TPRA1Q86W33 373 aa16.09■□□□□ 0.17
SHKBP1-214ENST00000597396 C11orf42Q8N5U0 333 aa16.09■□□□□ 0.17
SHKBP1-214ENST00000597396 SIGLECL1Q8N7X8 197 aa16.09■□□□□ 0.17
SHKBP1-214ENST00000597396 CORO2AQ92828 525 aa16.09■□□□□ 0.17
SHKBP1-214ENST00000597396 YIPF6Q96EC8 236 aa16.09■□□□□ 0.17
SHKBP1-214ENST00000597396 URM1Q9BTM9 101 aaKnown RBP16.09■□□□□ 0.17
SHKBP1-214ENST00000597396 GAL3ST2Q9H3Q3 398 aa16.09■□□□□ 0.17
SHKBP1-214ENST00000597396 TAS2R3Q9NYW6 316 aa16.09■□□□□ 0.17
SHKBP1-214ENST00000597396 RCC2Q9P258 522 aaKnown RBP16.09■□□□□ 0.17
SHKBP1-214ENST00000597396 A0A0A6YYJ9 748 aa16.08■□□□□ 0.16
SHKBP1-214ENST00000597396 TMEM30CPA0ZSE6 113 aa16.08■□□□□ 0.16
SHKBP1-214ENST00000597396 IFITM5A6NNB3 132 aa16.08■□□□□ 0.16
SHKBP1-214ENST00000597396 PDCD6O75340 191 aa16.08■□□□□ 0.16
SHKBP1-214ENST00000597396 CLPXO76031 633 aa16.08■□□□□ 0.16
SHKBP1-214ENST00000597396 COX7A1P24310 79 aa16.08■□□□□ 0.16
SHKBP1-214ENST00000597396 UBE2E1P51965 193 aa16.08■□□□□ 0.16
SHKBP1-214ENST00000597396 QRFPP83859 136 aa16.08■□□□□ 0.16
SHKBP1-214ENST00000597396 C2orf76Q3KRA6 126 aa16.08■□□□□ 0.16
SHKBP1-214ENST00000597396 NKAPLQ5M9Q1 402 aa16.08■□□□□ 0.16
SHKBP1-214ENST00000597396 SLC35E4Q6ICL7 350 aa16.08■□□□□ 0.16
SHKBP1-214ENST00000597396 GDPGP1Q6ZNW5 385 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms