RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 TBC1D26Q86UD7 250 aa19.37■□□□□ 0.69
SRRM1-222ENST00000596378 DEFB124Q8NES8 71 aa19.37■□□□□ 0.69
SRRM1-222ENST00000596378 SPAARA0A1B0GVQ0 90 aa19.37■□□□□ 0.69
SRRM1-222ENST00000596378 MED6O75586 246 aa19.37■□□□□ 0.69
SRRM1-222ENST00000596378 TK1P04183 234 aa19.37■□□□□ 0.69
SRRM1-222ENST00000596378 CCL11P51671 97 aa19.37■□□□□ 0.69
SRRM1-222ENST00000596378 POM121Q96HA1 1249 aa19.37■□□□□ 0.69
SRRM1-222ENST00000596378 OPA3Q9H6K4 179 aa19.37■□□□□ 0.69
SRRM1-222ENST00000596378 LHX6Q9UPM6 363 aa19.37■□□□□ 0.69
SRRM1-222ENST00000596378 IGHV3-64DA0A0J9YX35 117 aa19.36■□□□□ 0.69
SRRM1-222ENST00000596378 FAM74A7A6NL05 159 aa19.36■□□□□ 0.69
SRRM1-222ENST00000596378 GPR31O00270 319 aa19.36■□□□□ 0.69
SRRM1-222ENST00000596378 ID4P47928 161 aa19.36■□□□□ 0.69
SRRM1-222ENST00000596378 ERVS71-1P61550 626 aa19.36■□□□□ 0.69
SRRM1-222ENST00000596378 GNG3P63215 75 aa19.36■□□□□ 0.69
SRRM1-222ENST00000596378 FAM74A3Q4VXF1 159 aa19.36■□□□□ 0.69
SRRM1-222ENST00000596378 Q6ZS49 121 aa19.36■□□□□ 0.69
SRRM1-222ENST00000596378 P4HA3Q7Z4N8 544 aa19.36■□□□□ 0.69
SRRM1-222ENST00000596378 GAPTQ8N292 157 aa19.36■□□□□ 0.69
SRRM1-222ENST00000596378 USB1Q9BQ65 265 aaKnown RBP19.36■□□□□ 0.69
SRRM1-222ENST00000596378 MMP26Q9NRE1 261 aa19.36■□□□□ 0.69
SRRM1-222ENST00000596378 E5RGE8 158 aa19.36■□□□□ 0.69
SRRM1-222ENST00000596378 KCNJ3P48549 501 aa19.36■□□□□ 0.69
SRRM1-222ENST00000596378 SOX8P57073 446 aa19.36■□□□□ 0.69
SRRM1-222ENST00000596378 MRPL30Q8TCC3 161 aaKnown RBP19.36■□□□□ 0.69
SRRM1-222ENST00000596378 NANOS1Q8WY41 292 aaKnown RBP19.36■□□□□ 0.69
SRRM1-222ENST00000596378 ADAT1Q9BUB4 502 aaKnown RBP19.36■□□□□ 0.69
SRRM1-222ENST00000596378 GP6Q9HCN6 339 aa19.36■□□□□ 0.69
SRRM1-222ENST00000596378 FBXO9Q9UK97 447 aaPredicted RBP19.36■□□□□ 0.69
SRRM1-222ENST00000596378 NSG2Q9Y328 171 aa19.36■□□□□ 0.69
SRRM1-222ENST00000596378 FAM96BQ9Y3D0 163 aa19.36■□□□□ 0.69
SRRM1-222ENST00000596378 MPC1Q9Y5U8 109 aa19.36■□□□□ 0.69
SRRM1-222ENST00000596378 TRAV24A0A0B4J272 114 aa19.35■□□□□ 0.69
SRRM1-222ENST00000596378 DNASE2O00115 360 aaPredicted RBP19.35■□□□□ 0.69
SRRM1-222ENST00000596378 HSD17B6O14756 317 aa19.35■□□□□ 0.69
SRRM1-222ENST00000596378 GUCA2BQ16661 112 aa19.35■□□□□ 0.69
SRRM1-222ENST00000596378 ZNF573Q86YE8 665 aa19.35■□□□□ 0.69
SRRM1-222ENST00000596378 SMIM8Q96KF7 97 aa19.35■□□□□ 0.69
SRRM1-222ENST00000596378 PARP12Q9H0J9 701 aaKnown RBP19.35■□□□□ 0.69
SRRM1-222ENST00000596378 NKX2-6A6NCS4 301 aa19.35■□□□□ 0.69
SRRM1-222ENST00000596378 TRDCB7Z8K6 153 aa19.35■□□□□ 0.69
SRRM1-222ENST00000596378 LYZL6O75951 148 aa19.35■□□□□ 0.69
SRRM1-222ENST00000596378 ATG12O94817 140 aa19.35■□□□□ 0.69
SRRM1-222ENST00000596378 IDH3GP51553 393 aaPredicted RBP19.35■□□□□ 0.69
SRRM1-222ENST00000596378 FAM58AQ8N1B3 248 aa19.35■□□□□ 0.69
SRRM1-222ENST00000596378 ZNF565Q8N9K5 539 aa19.35■□□□□ 0.69
SRRM1-222ENST00000596378 SUMF1Q8NBK3 374 aa19.35■□□□□ 0.69
SRRM1-222ENST00000596378 FDCSPQ8NFU4 85 aa19.35■□□□□ 0.69
SRRM1-222ENST00000596378 NKX6-2Q9C056 277 aaPredicted RBP19.35■□□□□ 0.69
SRRM1-222ENST00000596378 PLEKHA2Q9HB19 425 aa19.35■□□□□ 0.69
SRRM1-222ENST00000596378 WFDC1Q9HC57 220 aa19.35■□□□□ 0.69
SRRM1-222ENST00000596378 RCL1Q9Y2P8 373 aaKnown RBP19.35■□□□□ 0.69
SRRM1-222ENST00000596378 EIF5AP63241 154 aaKnown RBP19.34■□□□□ 0.69
SRRM1-222ENST00000596378 WDR86Q86TI4 376 aa19.34■□□□□ 0.69
SRRM1-222ENST00000596378 LDLRAD3Q86YD5 345 aa19.34■□□□□ 0.69
SRRM1-222ENST00000596378 TSNAXQ99598 290 aaKnown RBP19.34■□□□□ 0.69
SRRM1-222ENST00000596378 TMEM222Q9H0R3 208 aa19.34■□□□□ 0.69
SRRM1-222ENST00000596378 OR51I2Q9H344 312 aa19.34■□□□□ 0.69
SRRM1-222ENST00000596378 TREM1Q9NP99 234 aa19.34■□□□□ 0.69
SRRM1-222ENST00000596378 PARD6AQ9NPB6 346 aa19.34■□□□□ 0.69
SRRM1-222ENST00000596378 CCL28Q9NRJ3 127 aa19.34■□□□□ 0.69
SRRM1-222ENST00000596378 UBE2J1Q9Y385 318 aaPredicted RBP19.34■□□□□ 0.69
SRRM1-222ENST00000596378 ATP23Q9Y6H3 246 aa19.34■□□□□ 0.69
SRRM1-222ENST00000596378 OTOGLQ3ZCN5 2332 aa19.34■□□□□ 0.69
SRRM1-222ENST00000596378 OR5B21A6NL26 309 aa19.34■□□□□ 0.69
SRRM1-222ENST00000596378 TNFSF12O43508 249 aa19.34■□□□□ 0.69
SRRM1-222ENST00000596378 WT1P19544 449 aaPredicted RBP19.34■□□□□ 0.69
SRRM1-222ENST00000596378 IGHV1-2P23083 117 aa19.34■□□□□ 0.69
SRRM1-222ENST00000596378 OR2J1Q9GZK6 312 aa19.34■□□□□ 0.69
SRRM1-222ENST00000596378 BOD1L1Q8NFC6 3051 aa19.33■□□□□ 0.69
SRRM1-222ENST00000596378 AGPAT2O15120 278 aa19.33■□□□□ 0.69
SRRM1-222ENST00000596378 JTBO76095 146 aa19.33■□□□□ 0.69
SRRM1-222ENST00000596378 F12P00748 615 aaPredicted RBP19.33■□□□□ 0.69
SRRM1-222ENST00000596378 GLAP06280 429 aa19.33■□□□□ 0.69
SRRM1-222ENST00000596378 ZNF14P17017 642 aaPredicted RBP19.33■□□□□ 0.69
SRRM1-222ENST00000596378 PJVKQ0ZLH3 352 aa19.33■□□□□ 0.69
SRRM1-222ENST00000596378 TBC1D28Q2M2D7 210 aa19.33■□□□□ 0.69
SRRM1-222ENST00000596378 ALKBH6Q3KRA9 238 aa19.33■□□□□ 0.69
SRRM1-222ENST00000596378 DMBX1Q8NFW5 382 aa19.33■□□□□ 0.69
SRRM1-222ENST00000596378 GMPPAQ96IJ6 420 aaPredicted RBP19.33■□□□□ 0.69
SRRM1-222ENST00000596378 TMED3Q9Y3Q3 217 aa19.33■□□□□ 0.69
SRRM1-222ENST00000596378 TRAV39A0A0B4J263 110 aa19.33■□□□□ 0.68
SRRM1-222ENST00000596378 GAPDHP04406 335 aaKnown RBP19.33■□□□□ 0.68
SRRM1-222ENST00000596378 FTH1P19P0C7X4 201 aa19.33■□□□□ 0.68
SRRM1-222ENST00000596378 SULT1A2P50226 295 aa19.33■□□□□ 0.68
SRRM1-222ENST00000596378 ASCL1P50553 236 aa19.33■□□□□ 0.68
SRRM1-222ENST00000596378 IL24Q13007 206 aa19.33■□□□□ 0.68
SRRM1-222ENST00000596378 SRSF7Q16629 238 aaKnown RBP eCLIP19.33■□□□□ 0.682e-6■■■□□ 16.9
SRRM1-222ENST00000596378 EIF5AL1Q6IS14 154 aaKnown RBP19.33■□□□□ 0.68
SRRM1-222ENST00000596378 PIP4P1Q86T03 277 aa19.33■□□□□ 0.68
SRRM1-222ENST00000596378 PUSL1Q8N0Z8 303 aaKnown RBP19.33■□□□□ 0.68
SRRM1-222ENST00000596378 OR4D5Q8NGN0 318 aa19.33■□□□□ 0.68
SRRM1-222ENST00000596378 TRIB1Q96RU8 372 aa19.33■□□□□ 0.68
SRRM1-222ENST00000596378 LAMA5O15230 3695 aa19.32■□□□□ 0.68
SRRM1-222ENST00000596378 KIR2DS1A0A191URI9 304 aa19.32■□□□□ 0.68
SRRM1-222ENST00000596378 PRSS44E7EML9 344 aa19.32■□□□□ 0.68
SRRM1-222ENST00000596378 ST8SIA3O43173 380 aa19.32■□□□□ 0.68
SRRM1-222ENST00000596378 SMPD2O60906 423 aa19.32■□□□□ 0.68
SRRM1-222ENST00000596378 SLC34A2O95436 690 aa19.32■□□□□ 0.68
SRRM1-222ENST00000596378 KIR2DS4P43632 304 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms