RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 GABRR1P24046 479 aa8.68□□□□□ -1.02
LIG1-210ENST00000596332 TMBIM6P55061 237 aa8.68□□□□□ -1.02
LIG1-210ENST00000596332 ARF6P62330 175 aa8.68□□□□□ -1.02
LIG1-210ENST00000596332 GRK1Q15835 563 aa8.68□□□□□ -1.02
LIG1-210ENST00000596332 CD276Q5ZPR3 534 aa8.68□□□□□ -1.02
LIG1-210ENST00000596332 LINC00596Q86U02 117 aa8.68□□□□□ -1.02
LIG1-210ENST00000596332 GLCCI1Q86VQ1 547 aa8.68□□□□□ -1.02
LIG1-210ENST00000596332 CLVS1Q8IUQ0 354 aaPredicted RBP8.68□□□□□ -1.02
LIG1-210ENST00000596332 ASCC1Q8N9N2 400 aaKnown RBP8.68□□□□□ -1.02
LIG1-210ENST00000596332 OR5D13Q8NGL4 314 aa8.68□□□□□ -1.02
LIG1-210ENST00000596332 CORO2AQ92828 525 aa8.68□□□□□ -1.02
LIG1-210ENST00000596332 PTX4Q96A99 478 aa8.68□□□□□ -1.02
LIG1-210ENST00000596332 SLC25A38Q96DW6 304 aa8.68□□□□□ -1.02
LIG1-210ENST00000596332 SULT4A1Q9BR01 284 aa8.68□□□□□ -1.02
LIG1-210ENST00000596332 DPCDQ9BVM2 203 aaPredicted RBP8.68□□□□□ -1.02
LIG1-210ENST00000596332 NCOR1P1Q9H4R4 102 aa8.68□□□□□ -1.02
LIG1-210ENST00000596332 DAPK2Q9UIK4 370 aa8.68□□□□□ -1.02
LIG1-210ENST00000596332 SCOCQ9UIL1 159 aa8.68□□□□□ -1.02
LIG1-210ENST00000596332 SOX21Q9Y651 276 aaPredicted RBP8.68□□□□□ -1.02
LIG1-210ENST00000596332 TRBV23-1A0A0A0MS06 115 aa8.67□□□□□ -1.02
LIG1-210ENST00000596332 C17orf98A8MV24 154 aa8.67□□□□□ -1.02
LIG1-210ENST00000596332 H3BMQ9 156 aa8.67□□□□□ -1.02
LIG1-210ENST00000596332 J3QLI3 93 aa8.67□□□□□ -1.02
LIG1-210ENST00000596332 OR7C1O76099 320 aaPredicted RBP8.67□□□□□ -1.02
LIG1-210ENST00000596332 MT-ND4P03905 459 aa8.67□□□□□ -1.02
LIG1-210ENST00000596332 CCL3L1P16619 93 aa8.67□□□□□ -1.02
LIG1-210ENST00000596332 RAB6AP20340 208 aa8.67□□□□□ -1.02
LIG1-210ENST00000596332 FUT3P21217 361 aa8.67□□□□□ -1.02
LIG1-210ENST00000596332 GDNFP39905 211 aa8.67□□□□□ -1.02
LIG1-210ENST00000596332 P2RX3P56373 397 aa8.67□□□□□ -1.02
LIG1-210ENST00000596332 RPL31P62899 125 aaKnown RBP8.67□□□□□ -1.02
LIG1-210ENST00000596332 PRB3Q04118 309 aaPredicted RBP8.67□□□□□ -1.02
LIG1-210ENST00000596332 C17orf58Q2M2W7 97 aa8.67□□□□□ -1.02
LIG1-210ENST00000596332 DOCK11Q5JSL3 2073 aa8.67□□□□□ -1.02
LIG1-210ENST00000596332 FAM120AOSQ5T036 256 aa8.67□□□□□ -1.02
LIG1-210ENST00000596332 DCAF12L2Q5VW00 463 aa8.67□□□□□ -1.02
LIG1-210ENST00000596332 FOXB2Q5VYV0 432 aa8.67□□□□□ -1.02
LIG1-210ENST00000596332 OLFML2AQ68BL7 652 aa8.67□□□□□ -1.02
LIG1-210ENST00000596332 FAHD2BQ6P2I3 314 aaPredicted RBP8.67□□□□□ -1.02
LIG1-210ENST00000596332 ZNF497Q6ZNH5 498 aa8.67□□□□□ -1.02
LIG1-210ENST00000596332 C1orf122Q6ZSJ8 110 aa8.67□□□□□ -1.02
LIG1-210ENST00000596332 IL17RELQ6ZVW7 336 aa8.67□□□□□ -1.02
LIG1-210ENST00000596332 C6orf201Q7Z4U5 140 aa8.67□□□□□ -1.02
LIG1-210ENST00000596332 OR13A1Q8NGR1 328 aa8.67□□□□□ -1.02
LIG1-210ENST00000596332 UPRTQ96BW1 309 aa8.67□□□□□ -1.02
LIG1-210ENST00000596332 ISOC1Q96CN7 298 aa8.67□□□□□ -1.02
LIG1-210ENST00000596332 FAHD2AQ96GK7 314 aa8.67□□□□□ -1.02
LIG1-210ENST00000596332 AJUBAQ96IF1 538 aa8.67□□□□□ -1.02
LIG1-210ENST00000596332 S100A13Q99584 98 aa8.67□□□□□ -1.02
LIG1-210ENST00000596332 FAAP24Q9BTP7 215 aa8.67□□□□□ -1.02
LIG1-210ENST00000596332 TMEM59Q9BXS4 323 aa8.67□□□□□ -1.02
LIG1-210ENST00000596332 CST11Q9H112 138 aa8.67□□□□□ -1.02
LIG1-210ENST00000596332 C7orf69Q9H7B7 122 aa8.67□□□□□ -1.02
LIG1-210ENST00000596332 LINC00574Q9H8X3 128 aa8.67□□□□□ -1.02
LIG1-210ENST00000596332 UNKLQ9H9P5 680 aaKnown RBP8.67□□□□□ -1.02
LIG1-210ENST00000596332 PCDHB16Q9NRJ7 776 aa8.67□□□□□ -1.02
LIG1-210ENST00000596332 ELF5Q9UKW6 265 aaPredicted RBP8.67□□□□□ -1.02
LIG1-210ENST00000596332 RAB22AQ9UL26 194 aa8.67□□□□□ -1.02
LIG1-210ENST00000596332 PEX16Q9Y5Y5 336 aa8.67□□□□□ -1.02
LIG1-210ENST00000596332 HIVEP2P31629 2446 aa8.66□□□□□ -1.02
LIG1-210ENST00000596332 SETD2Q9BYW2 2564 aaPredicted RBP8.66□□□□□ -1.02
LIG1-210ENST00000596332 TRAV39A0A0B4J263 110 aa8.66□□□□□ -1.02
LIG1-210ENST00000596332 A6NHS1 94 aa8.66□□□□□ -1.02
LIG1-210ENST00000596332 HSPB6O14558 160 aa8.66□□□□□ -1.02
LIG1-210ENST00000596332 ENSAO43768 121 aaKnown RBP8.66□□□□□ -1.02
LIG1-210ENST00000596332 PDCD6O75340 191 aa8.66□□□□□ -1.02
LIG1-210ENST00000596332 GLAP06280 429 aa8.66□□□□□ -1.02
LIG1-210ENST00000596332 LIPFP07098 398 aa8.66□□□□□ -1.02
LIG1-210ENST00000596332 GATA3P23771 443 aa8.66□□□□□ -1.02
LIG1-210ENST00000596332 SERPINB10P48595 397 aa8.66□□□□□ -1.02
LIG1-210ENST00000596332 VEGFCP49767 419 aa8.66□□□□□ -1.02
LIG1-210ENST00000596332 MEF2CQ06413 473 aaPredicted RBP8.66□□□□□ -1.02
LIG1-210ENST00000596332 ATXN7L3Q14CW9 347 aaPredicted RBP8.66□□□□□ -1.02
LIG1-210ENST00000596332 IDNKQ5T6J7 187 aa8.66□□□□□ -1.02
LIG1-210ENST00000596332 SLC35E4Q6ICL7 350 aa8.66□□□□□ -1.02
LIG1-210ENST00000596332 RAB12Q6IQ22 244 aa8.66□□□□□ -1.02
LIG1-210ENST00000596332 FIP1L1Q6UN15 594 aaKnown RBP8.66□□□□□ -1.02
LIG1-210ENST00000596332 BAIAP2L2Q6UXY1 529 aa8.66□□□□□ -1.02
LIG1-210ENST00000596332 KIR3DL3Q8N743 410 aa8.66□□□□□ -1.02
LIG1-210ENST00000596332 LGALS14Q8TCE9 139 aa8.66□□□□□ -1.02
LIG1-210ENST00000596332 DYNC2LI1Q8TCX1 351 aa8.66□□□□□ -1.02
LIG1-210ENST00000596332 H1FXQ92522 213 aaKnown RBP8.66□□□□□ -1.02
LIG1-210ENST00000596332 ZDHHC16Q969W1 377 aa8.66□□□□□ -1.02
LIG1-210ENST00000596332 WDFY2Q96P53 400 aa8.66□□□□□ -1.02
LIG1-210ENST00000596332 PECRQ9BY49 303 aa8.66□□□□□ -1.02
LIG1-210ENST00000596332 DCSTAMPQ9H295 470 aa8.66□□□□□ -1.02
LIG1-210ENST00000596332 KIF25Q9UIL4 384 aa8.66□□□□□ -1.02
LIG1-210ENST00000596332 KCNS2Q9ULS6 477 aa8.66□□□□□ -1.02
LIG1-210ENST00000596332 DSCAML1Q8TD84 2053 aa8.66□□□□□ -1.02
LIG1-210ENST00000596332 A0A0G2JMP0 313 aa8.65□□□□□ -1.02
LIG1-210ENST00000596332 CENPVL3A0A0U1RRI6 287 aa8.65□□□□□ -1.02
LIG1-210ENST00000596332 A0A0X1KG70 313 aa8.65□□□□□ -1.02
LIG1-210ENST00000596332 ODAMA1E959 279 aa8.65□□□□□ -1.02
LIG1-210ENST00000596332 UBE2QL1A1L167 161 aa8.65□□□□□ -1.02
LIG1-210ENST00000596332 DPPA5A6NC42 116 aa8.65□□□□□ -1.02
LIG1-210ENST00000596332 NPIPB11E5RHQ5 1161 aa8.65□□□□□ -1.02
LIG1-210ENST00000596332 RNASEK-C17orf49H0YIS7 233 aa8.65□□□□□ -1.02
LIG1-210ENST00000596332 C15orf65H3BRN8 121 aa8.65□□□□□ -1.02
LIG1-210ENST00000596332 CRLF1O75462 422 aa8.65□□□□□ -1.02
LIG1-210ENST00000596332 NAPSAO96009 420 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms