RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 WNT2P09544 360 aa11.4□□□□□ -0.58
VRK3-209ENST00000594948 GLI4P10075 376 aa11.4□□□□□ -0.58
VRK3-209ENST00000594948 SLC25A6P12236 298 aa11.4□□□□□ -0.58
VRK3-209ENST00000594948 S100A2P29034 98 aa11.4□□□□□ -0.58
VRK3-209ENST00000594948 GLIPR1P48060 266 aa11.4□□□□□ -0.58
VRK3-209ENST00000594948 TAS2R30P59541 319 aa11.4□□□□□ -0.58
VRK3-209ENST00000594948 CD81P60033 236 aa11.4□□□□□ -0.58
VRK3-209ENST00000594948 PSG4Q00888 419 aa11.4□□□□□ -0.58
VRK3-209ENST00000594948 DAZAP2Q15038 168 aaPredicted RBP11.4□□□□□ -0.58
VRK3-209ENST00000594948 ACSF3Q4G176 576 aaPredicted RBP11.4□□□□□ -0.58
VRK3-209ENST00000594948 BRICD5Q6PL45 260 aa11.4□□□□□ -0.58
VRK3-209ENST00000594948 IL22RA1Q8N6P7 574 aa11.4□□□□□ -0.58
VRK3-209ENST00000594948 CLDND2Q8NHS1 167 aa11.4□□□□□ -0.58
VRK3-209ENST00000594948 PLPPR1Q8TBJ4 325 aa11.4□□□□□ -0.58
VRK3-209ENST00000594948 EXTL1Q92935 676 aa11.4□□□□□ -0.58
VRK3-209ENST00000594948 CPNE4Q96A23 557 aaPredicted RBP11.4□□□□□ -0.58
VRK3-209ENST00000594948 ATP5SQ99766 215 aa11.4□□□□□ -0.58
VRK3-209ENST00000594948 NIPSNAP3BQ9BS92 247 aa11.4□□□□□ -0.58
VRK3-209ENST00000594948 PRDM14Q9GZV8 571 aa11.4□□□□□ -0.58
VRK3-209ENST00000594948 CRLF2Q9HC73 371 aa11.4□□□□□ -0.58
VRK3-209ENST00000594948 SLC7A10Q9NS82 523 aa11.4□□□□□ -0.58
VRK3-209ENST00000594948 BRWD1Q9NSI6 2320 aa11.4□□□□□ -0.58
VRK3-209ENST00000594948 TREM2Q9NZC2 230 aa11.4□□□□□ -0.58
VRK3-209ENST00000594948 CA14Q9ULX7 337 aa11.4□□□□□ -0.58
VRK3-209ENST00000594948 NOSIPQ9Y314 301 aaKnown RBP11.4□□□□□ -0.58
VRK3-209ENST00000594948 SHANK1Q9Y566 2161 aa11.4□□□□□ -0.58
VRK3-209ENST00000594948 WSB1Q9Y6I7 421 aa11.4□□□□□ -0.58
VRK3-209ENST00000594948 ARID1AO14497 2285 aa11.4□□□□□ -0.58
VRK3-209ENST00000594948 KIR2DS1A0A191URI9 304 aa11.39□□□□□ -0.59
VRK3-209ENST00000594948 ZNF716A6NP11 495 aa11.39□□□□□ -0.59
VRK3-209ENST00000594948 CDRT15L2A8MXV6 281 aa11.39□□□□□ -0.59
VRK3-209ENST00000594948 H0Y980 276 aa11.39□□□□□ -0.59
VRK3-209ENST00000594948 ADAM20O43506 726 aa11.39□□□□□ -0.59
VRK3-209ENST00000594948 SRD5A2P31213 254 aa11.39□□□□□ -0.59
VRK3-209ENST00000594948 KIR2DS4P43632 304 aa11.39□□□□□ -0.59
VRK3-209ENST00000594948 B3GALT5-AS1P59052 145 aa11.39□□□□□ -0.59
VRK3-209ENST00000594948 DLK1P80370 383 aa11.39□□□□□ -0.59
VRK3-209ENST00000594948 ZNF92Q03936 586 aa11.39□□□□□ -0.59
VRK3-209ENST00000594948 PNRC1Q12796 327 aaPredicted RBP11.39□□□□□ -0.59
VRK3-209ENST00000594948 KIR2DS1Q14954 304 aa11.39□□□□□ -0.59
VRK3-209ENST00000594948 MPV17LQ2QL34 196 aa11.39□□□□□ -0.59
VRK3-209ENST00000594948 NRN1LQ496H8 165 aa11.39□□□□□ -0.59
VRK3-209ENST00000594948 IGSF11Q5DX21 431 aa11.39□□□□□ -0.59
VRK3-209ENST00000594948 ABLIM2Q6H8Q1 611 aa11.39□□□□□ -0.59
VRK3-209ENST00000594948 GUSBP11Q6P575 273 aa11.39□□□□□ -0.59
VRK3-209ENST00000594948 ZNF611Q8N823 705 aa11.39□□□□□ -0.59
VRK3-209ENST00000594948 Q8WTZ3 238 aa11.39□□□□□ -0.59
VRK3-209ENST00000594948 PIGCQ92535 297 aa11.39□□□□□ -0.59
VRK3-209ENST00000594948 SLAMF9Q96A28 289 aa11.39□□□□□ -0.59
VRK3-209ENST00000594948 FOXB1Q99853 325 aa11.39□□□□□ -0.59
VRK3-209ENST00000594948 ABHD14AQ9BUJ0 271 aa11.39□□□□□ -0.59
VRK3-209ENST00000594948 C1QTNF5Q9BXJ0 243 aa11.39□□□□□ -0.59
VRK3-209ENST00000594948 TMEM242Q9NWH2 141 aa11.39□□□□□ -0.59
VRK3-209ENST00000594948 GAR1Q9NY12 217 aaKnown RBP11.39□□□□□ -0.59
VRK3-209ENST00000594948 LIPGQ9Y5X9 500 aa11.39□□□□□ -0.59
VRK3-209ENST00000594948 LOC102723971A0A1B0GUV8 181 aa11.39□□□□□ -0.59
VRK3-209ENST00000594948 A0A1B0GV50 99 aa11.39□□□□□ -0.59
VRK3-209ENST00000594948 MED19A0JLT2 244 aaPredicted RBP11.39□□□□□ -0.59
VRK3-209ENST00000594948 OR7C1O76099 320 aaPredicted RBP11.39□□□□□ -0.59
VRK3-209ENST00000594948 COX6A1P12074 109 aa11.39□□□□□ -0.59
VRK3-209ENST00000594948 NPBWR2P48146 333 aa11.39□□□□□ -0.59
VRK3-209ENST00000594948 ASCL1P50553 236 aa11.39□□□□□ -0.59
VRK3-209ENST00000594948 HAGHQ16775 308 aa11.39□□□□□ -0.59
VRK3-209ENST00000594948 OR2B11Q5JQS5 317 aa11.39□□□□□ -0.59
VRK3-209ENST00000594948 CXorf66Q5JRM2 361 aaPredicted RBP11.39□□□□□ -0.59
VRK3-209ENST00000594948 AAED1Q7RTV5 226 aa11.39□□□□□ -0.59
VRK3-209ENST00000594948 GTF3AQ92664 365 aaKnown RBP11.39□□□□□ -0.59
VRK3-209ENST00000594948 DOK5Q9P104 306 aa11.39□□□□□ -0.59
VRK3-209ENST00000594948 MED12Q93074 2177 aa11.39□□□□□ -0.59
VRK3-209ENST00000594948 LY6G6EA0A0G2JKS1 128 aa11.38□□□□□ -0.59
VRK3-209ENST00000594948 SLC22A20A6NK97 555 aa11.38□□□□□ -0.59
VRK3-209ENST00000594948 IFITM10A6NMD0 228 aa11.38□□□□□ -0.59
VRK3-209ENST00000594948 CXCL1P09341 107 aa11.38□□□□□ -0.59
VRK3-209ENST00000594948 ITGA3P26006 1051 aa11.38□□□□□ -0.59
VRK3-209ENST00000594948 EPHA8P29322 1005 aaPredicted RBP11.38□□□□□ -0.59
VRK3-209ENST00000594948 NDUFA6P56556 154 aa11.38□□□□□ -0.59
VRK3-209ENST00000594948 MLF1P58340 268 aa11.38□□□□□ -0.59
VRK3-209ENST00000594948 FGF12P61328 243 aa11.38□□□□□ -0.59
VRK3-209ENST00000594948 HLA-DRB3P79483 266 aa11.38□□□□□ -0.59
VRK3-209ENST00000594948 IL11RAQ14626 422 aa11.38□□□□□ -0.59
VRK3-209ENST00000594948 ZNF674Q2M3X9 581 aa11.38□□□□□ -0.59
VRK3-209ENST00000594948 ZNF818PQ6ZRF7 136 aa11.38□□□□□ -0.59
VRK3-209ENST00000594948 COLCA1Q6ZS62 124 aa11.38□□□□□ -0.59
VRK3-209ENST00000594948 CALHM1Q8IU99 346 aa11.38□□□□□ -0.59
VRK3-209ENST00000594948 CMTM1Q8IZ96 169 aa11.38□□□□□ -0.59
VRK3-209ENST00000594948 H1FOOQ8IZA3 346 aaPredicted RBP11.38□□□□□ -0.59
VRK3-209ENST00000594948 CYB561D1Q8N8Q1 229 aa11.38□□□□□ -0.59
VRK3-209ENST00000594948 PHF7Q9BWX1 381 aaPredicted RBP11.38□□□□□ -0.59
VRK3-209ENST00000594948 RIMS4Q9H426 269 aaPredicted RBP11.38□□□□□ -0.59
VRK3-209ENST00000594948 RNF150Q9ULK6 438 aa11.38□□□□□ -0.59
VRK3-209ENST00000594948 U3KQA8 63 aa11.38□□□□□ -0.59
VRK3-209ENST00000594948 TRBV6-6A0A0A6YYG2 114 aa11.37□□□□□ -0.59
VRK3-209ENST00000594948 CCDC85CA6NKD9 419 aa11.37□□□□□ -0.59
VRK3-209ENST00000594948 ZNF727A8MUV8 499 aa11.37□□□□□ -0.59
VRK3-209ENST00000594948 H0YL77 283 aa11.37□□□□□ -0.59
VRK3-209ENST00000594948 CELA2AP08217 269 aa11.37□□□□□ -0.59
VRK3-209ENST00000594948 MMP7P09237 267 aaPredicted RBP11.37□□□□□ -0.59
VRK3-209ENST00000594948 EDN3P14138 238 aa11.37□□□□□ -0.59
VRK3-209ENST00000594948 B4GALT1P15291 398 aa11.37□□□□□ -0.59
VRK3-209ENST00000594948 NOVA1P51513 510 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms