RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 CCDC107Q8WV48 283 aa12.76□□□□□ -0.37
VRK3-207ENST00000594092 MED30Q96HR3 178 aa12.76□□□□□ -0.37
VRK3-207ENST00000594092 TREM2Q9NZC2 230 aa12.76□□□□□ -0.37
VRK3-207ENST00000594092 GLS2Q9UI32 602 aa12.76□□□□□ -0.37
VRK3-207ENST00000594092 HRNRQ86YZ3 2850 aaPredicted RBP12.76□□□□□ -0.37
VRK3-207ENST00000594092 TMEM82A0PJX8 343 aa12.75□□□□□ -0.37
VRK3-207ENST00000594092 CYB5R3P00387 301 aaPredicted RBP12.75□□□□□ -0.37
VRK3-207ENST00000594092 PAN3Q58A45 887 aaKnown RBP12.75□□□□□ -0.37
VRK3-207ENST00000594092 CD276Q5ZPR3 534 aa12.75□□□□□ -0.37
VRK3-207ENST00000594092 FAM90A1Q86YD7 464 aa12.75□□□□□ -0.37
VRK3-207ENST00000594092 ZDHHC22Q8N966 263 aa12.75□□□□□ -0.37
VRK3-207ENST00000594092 OR11L1Q8NGX0 322 aa12.75□□□□□ -0.37
VRK3-207ENST00000594092 NEK7Q8TDX7 302 aa12.75□□□□□ -0.37
VRK3-207ENST00000594092 PPA2Q9H2U2 334 aa12.75□□□□□ -0.37
VRK3-207ENST00000594092 ZNF286AQ9HBT8 521 aa12.75□□□□□ -0.37
VRK3-207ENST00000594092 CHMP1AQ9HD42 196 aaPredicted RBP12.75□□□□□ -0.37
VRK3-207ENST00000594092 EHFQ9NZC4 300 aa12.75□□□□□ -0.37
VRK3-207ENST00000594092 ANXA10Q9UJ72 324 aa12.75□□□□□ -0.37
VRK3-207ENST00000594092 KLF2Q9Y5W3 355 aaPredicted RBP12.75□□□□□ -0.37
VRK3-207ENST00000594092 NPTNQ9Y639 398 aa12.75□□□□□ -0.37
VRK3-207ENST00000594092 SPTAN1Q13813 2472 aaKnown RBP12.74□□□□□ -0.37
VRK3-207ENST00000594092 IGKV1D-8A0A087WSZ0 117 aa12.74□□□□□ -0.37
VRK3-207ENST00000594092 RFPL4AA6NLU0 287 aa12.74□□□□□ -0.37
VRK3-207ENST00000594092 A6NNC1 897 aa12.74□□□□□ -0.37
VRK3-207ENST00000594092 A8MV72 311 aaPredicted RBP12.74□□□□□ -0.37
VRK3-207ENST00000594092 RFPL4AL1F8VTS6 287 aa12.74□□□□□ -0.37
VRK3-207ENST00000594092 SSNA1O43805 119 aa12.74□□□□□ -0.37
VRK3-207ENST00000594092 CREBL2O60519 120 aaPredicted RBP12.74□□□□□ -0.37
VRK3-207ENST00000594092 TFF1P04155 84 aa12.74□□□□□ -0.37
VRK3-207ENST00000594092 PSG2P11465 335 aa12.74□□□□□ -0.37
VRK3-207ENST00000594092 LMO1P25800 156 aa12.74□□□□□ -0.37
VRK3-207ENST00000594092 EIF2B2P49770 351 aaKnown RBP12.74□□□□□ -0.37
VRK3-207ENST00000594092 RBM39Q14498 530 aaKnown RBP12.74□□□□□ -0.37
VRK3-207ENST00000594092 CDK10Q15131 360 aa12.74□□□□□ -0.37
VRK3-207ENST00000594092 FAM201AQ5SY85 155 aa12.74□□□□□ -0.37
VRK3-207ENST00000594092 Q6ZPA2 131 aa12.74□□□□□ -0.37
VRK3-207ENST00000594092 OR5T2Q8NGG2 359 aa12.74□□□□□ -0.37
VRK3-207ENST00000594092 ST6GAL2Q96JF0 529 aa12.74□□□□□ -0.37
VRK3-207ENST00000594092 SEC22CQ9BRL7 303 aa12.74□□□□□ -0.37
VRK3-207ENST00000594092 DCAF16Q9NXF7 216 aa12.74□□□□□ -0.37
VRK3-207ENST00000594092 ING3Q9NXR8 418 aa12.74□□□□□ -0.37
VRK3-207ENST00000594092 DNAJB11Q9UBS4 358 aa12.74□□□□□ -0.37
VRK3-207ENST00000594092 WIPI2Q9Y4P8 454 aa12.74□□□□□ -0.37
VRK3-207ENST00000594092 DYSFO75923 2080 aa12.74□□□□□ -0.37
VRK3-207ENST00000594092 COL12A1Q99715 3063 aa12.74□□□□□ -0.37
VRK3-207ENST00000594092 IGHV3OR15-7A0A075B7D8 119 aa12.74□□□□□ -0.37
VRK3-207ENST00000594092 SNRPGP15A8MWD9 76 aa12.74□□□□□ -0.37
VRK3-207ENST00000594092 IFNL4K9M1U5 179 aa12.74□□□□□ -0.37
VRK3-207ENST00000594092 NAPSAO96009 420 aa12.74□□□□□ -0.37
VRK3-207ENST00000594092 CD8AP01732 235 aa12.74□□□□□ -0.37
VRK3-207ENST00000594092 HPXP02790 462 aa12.74□□□□□ -0.37
VRK3-207ENST00000594092 CD80P33681 288 aa12.74□□□□□ -0.37
VRK3-207ENST00000594092 CD83Q01151 205 aa12.74□□□□□ -0.37
VRK3-207ENST00000594092 OVCH2Q7RTZ1 564 aa12.74□□□□□ -0.37
VRK3-207ENST00000594092 SLC36A1Q7Z2H8 476 aa12.74□□□□□ -0.37
VRK3-207ENST00000594092 TMED4Q7Z7H5 227 aa12.74□□□□□ -0.37
VRK3-207ENST00000594092 CD177Q8N6Q3 437 aa12.74□□□□□ -0.37
VRK3-207ENST00000594092 TERB2Q8NHR7 220 aa12.74□□□□□ -0.37
VRK3-207ENST00000594092 ALX4Q9H161 411 aaPredicted RBP12.74□□□□□ -0.37
VRK3-207ENST00000594092 CBLN4Q9NTU7 201 aa12.74□□□□□ -0.37
VRK3-207ENST00000594092 IGKV1D-17A0A075B6S4 117 aa12.73□□□□□ -0.37
VRK3-207ENST00000594092 OR2AT4A6NND4 320 aa12.73□□□□□ -0.37
VRK3-207ENST00000594092 PSPNO60542 156 aa12.73□□□□□ -0.37
VRK3-207ENST00000594092 VSIG10L2P0DP72 767 aa12.73□□□□□ -0.37
VRK3-207ENST00000594092 IRF2P14316 349 aa12.73□□□□□ -0.37
VRK3-207ENST00000594092 PRDX2P32119 198 aa12.73□□□□□ -0.37
VRK3-207ENST00000594092 PPOXP50336 477 aa12.73□□□□□ -0.37
VRK3-207ENST00000594092 FCN2Q15485 313 aa12.73□□□□□ -0.37
VRK3-207ENST00000594092 GRK1Q15835 563 aa12.73□□□□□ -0.37
VRK3-207ENST00000594092 ATPAF1Q5TC12 328 aaPredicted RBP12.73□□□□□ -0.37
VRK3-207ENST00000594092 SHEQ5VZ18 495 aa12.73□□□□□ -0.37
VRK3-207ENST00000594092 ZNF626Q68DY1 528 aa12.73□□□□□ -0.37
VRK3-207ENST00000594092 C11orf71Q6IPW1 123 aa12.73□□□□□ -0.37
VRK3-207ENST00000594092 RIMS4Q9H426 269 aaPredicted RBP12.73□□□□□ -0.37
VRK3-207ENST00000594092 SEBOXQ9HB31 216 aaPredicted RBP12.73□□□□□ -0.37
VRK3-207ENST00000594092 TMEM165Q9HC07 324 aa12.73□□□□□ -0.37
VRK3-207ENST00000594092 RANGRFQ9HD47 186 aaPredicted RBP12.73□□□□□ -0.37
VRK3-207ENST00000594092 NECAP2Q9NVZ3 263 aa12.73□□□□□ -0.37
VRK3-207ENST00000594092 ZNF69Q9UC07 566 aa12.73□□□□□ -0.37
VRK3-207ENST00000594092 METRNQ9UJH8 293 aa12.73□□□□□ -0.37
VRK3-207ENST00000594092 VSIG4Q9Y279 399 aa12.73□□□□□ -0.37
VRK3-207ENST00000594092 SDCBPO00560 298 aaPredicted RBP12.72□□□□□ -0.37
VRK3-207ENST00000594092 SOD3P08294 240 aa12.72□□□□□ -0.37
VRK3-207ENST00000594092 DANCRP0C864 163 aa12.72□□□□□ -0.37
VRK3-207ENST00000594092 COL10A1Q03692 680 aa12.72□□□□□ -0.37
VRK3-207ENST00000594092 SRSF7Q16629 238 aaKnown RBP eCLIP12.72□□□□□ -0.37
VRK3-207ENST00000594092 C4orf46Q504U0 113 aa12.72□□□□□ -0.37
VRK3-207ENST00000594092 PLPPR1Q8TBJ4 325 aa12.72□□□□□ -0.37
VRK3-207ENST00000594092 MRPL30Q8TCC3 161 aaKnown RBP12.72□□□□□ -0.37
VRK3-207ENST00000594092 MRGPRFQ96AM1 343 aa12.72□□□□□ -0.37
VRK3-207ENST00000594092 VRK1Q99986 396 aaPredicted RBP12.72□□□□□ -0.37
VRK3-207ENST00000594092 MYOZ1Q9NP98 299 aaPredicted RBP12.72□□□□□ -0.37
VRK3-207ENST00000594092 LRBAP50851 2863 aa12.72□□□□□ -0.37
VRK3-207ENST00000594092 LRRC30A6NM36 301 aa12.72□□□□□ -0.37
VRK3-207ENST00000594092 ZNF205O95201 554 aa12.72□□□□□ -0.37
VRK3-207ENST00000594092 OR4E1P0C645 316 aa12.72□□□□□ -0.37
VRK3-207ENST00000594092 MDH2P40926 338 aaKnown RBP12.72□□□□□ -0.37
VRK3-207ENST00000594092 C20orf204Q6ZNR8 217 aa12.72□□□□□ -0.37
VRK3-207ENST00000594092 DTX2Q86UW9 622 aa12.72□□□□□ -0.37
VRK3-207ENST00000594092 SCGB3A2Q96PL1 93 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms