RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 C9orf170A2RU37 121 aa11.19□□□□□ -0.62
VRK3-205ENST00000593919 C3orf80F5H4A9 247 aa11.19□□□□□ -0.62
VRK3-205ENST00000593919 OR4A8P0C604 315 aa11.19□□□□□ -0.62
VRK3-205ENST00000593919 CBX5P45973 191 aa11.19□□□□□ -0.62
VRK3-205ENST00000593919 FGF12P61328 243 aa11.19□□□□□ -0.62
VRK3-205ENST00000593919 DAZAP2Q15038 168 aaPredicted RBP11.19□□□□□ -0.62
VRK3-205ENST00000593919 ACTBL2Q562R1 376 aa11.19□□□□□ -0.62
VRK3-205ENST00000593919 BEX5Q5H9J7 111 aa11.19□□□□□ -0.62
VRK3-205ENST00000593919 PRAMEF6Q5VXH4 476 aa11.19□□□□□ -0.62
VRK3-205ENST00000593919 OR5M8Q8NGP6 311 aa11.19□□□□□ -0.62
VRK3-205ENST00000593919 ST8SIA4Q92187 359 aa11.19□□□□□ -0.62
VRK3-205ENST00000593919 NEUROG1Q92886 237 aa11.19□□□□□ -0.62
VRK3-205ENST00000593919 PLK3Q9H4B4 646 aa11.19□□□□□ -0.62
VRK3-205ENST00000593919 IL36RNQ9UBH0 155 aa11.19□□□□□ -0.62
VRK3-205ENST00000593919 POLDIP2Q9Y2S7 368 aa11.19□□□□□ -0.62
VRK3-205ENST00000593919 E7EQL1 145 aa11.18□□□□□ -0.62
VRK3-205ENST00000593919 NPY4RP50391 375 aa11.18□□□□□ -0.62
VRK3-205ENST00000593919 SNU13P55769 128 aaKnown RBP11.18□□□□□ -0.62
VRK3-205ENST00000593919 GMFBP60983 142 aa11.18□□□□□ -0.62
VRK3-205ENST00000593919 IL13RA1P78552 427 aa11.18□□□□□ -0.62
VRK3-205ENST00000593919 NKAPLQ5M9Q1 402 aa11.18□□□□□ -0.62
VRK3-205ENST00000593919 TMUB2Q71RG4 321 aa11.18□□□□□ -0.62
VRK3-205ENST00000593919 C6orf201Q7Z4U5 140 aa11.18□□□□□ -0.62
VRK3-205ENST00000593919 HOGA1Q86XE5 327 aa11.18□□□□□ -0.62
VRK3-205ENST00000593919 PDCD10Q9BUL8 212 aa11.18□□□□□ -0.62
VRK3-205ENST00000593919 TLNRD1Q9H1K6 362 aa11.18□□□□□ -0.62
VRK3-205ENST00000593919 MAB21L2Q9Y586 359 aa11.18□□□□□ -0.62
VRK3-205ENST00000593919 TRAV14DV4A0A0A6YYC5 116 aa11.17□□□□□ -0.62
VRK3-205ENST00000593919 A6NLC8 198 aa11.17□□□□□ -0.62
VRK3-205ENST00000593919 HMSDA8MTL9 139 aa11.17□□□□□ -0.62
VRK3-205ENST00000593919 DEFB108AA8MXU0 73 aa11.17□□□□□ -0.62
VRK3-205ENST00000593919 SPRY3O43610 288 aa11.17□□□□□ -0.62
VRK3-205ENST00000593919 PLAUP00749 431 aa11.17□□□□□ -0.62
VRK3-205ENST00000593919 PRKACAP17612 351 aa11.17□□□□□ -0.62
VRK3-205ENST00000593919 S100A11P31949 105 aa11.17□□□□□ -0.62
VRK3-205ENST00000593919 CD200P41217 278 aa11.17□□□□□ -0.62
VRK3-205ENST00000593919 OR3A3P47888 321 aa11.17□□□□□ -0.62
VRK3-205ENST00000593919 PDCD1Q15116 288 aa11.17□□□□□ -0.62
VRK3-205ENST00000593919 NHLRC3Q5JS37 347 aa11.17□□□□□ -0.62
VRK3-205ENST00000593919 VAX1Q5SQQ9 334 aa11.17□□□□□ -0.62
VRK3-205ENST00000593919 ZNF826PQ6ZT77 177 aa11.17□□□□□ -0.62
VRK3-205ENST00000593919 C11orf53Q8IXP5 236 aa11.17□□□□□ -0.62
VRK3-205ENST00000593919 TERB2Q8NHR7 220 aa11.17□□□□□ -0.62
VRK3-205ENST00000593919 PHB2Q99623 299 aa11.17□□□□□ -0.62
VRK3-205ENST00000593919 ARL6Q9H0F7 186 aa11.17□□□□□ -0.62
VRK3-205ENST00000593919 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.17□□□□□ -0.62
VRK3-205ENST00000593919 UFSP2Q9NUQ7 469 aa11.17□□□□□ -0.62
VRK3-205ENST00000593919 ZNF701Q9NV72 531 aaPredicted RBP11.17□□□□□ -0.62
VRK3-205ENST00000593919 PLEKHJ1Q9NW61 149 aa11.17□□□□□ -0.62
VRK3-205ENST00000593919 RNF115Q9Y4L5 304 aa11.17□□□□□ -0.62
VRK3-205ENST00000593919 DYSFO75923 2080 aa11.17□□□□□ -0.62
VRK3-205ENST00000593919 FAM25EA8MYX2 175 aa11.17□□□□□ -0.62
VRK3-205ENST00000593919 LEUTXA8MZ59 168 aa11.17□□□□□ -0.62
VRK3-205ENST00000593919 SDCBPO00560 298 aaPredicted RBP11.17□□□□□ -0.62
VRK3-205ENST00000593919 PGA5P0DJD9 388 aa11.17□□□□□ -0.62
VRK3-205ENST00000593919 MZT1Q08AG7 82 aa11.17□□□□□ -0.62
VRK3-205ENST00000593919 KCTD9Q7L273 389 aa11.17□□□□□ -0.62
VRK3-205ENST00000593919 ASB13Q8WXK3 278 aa11.17□□□□□ -0.62
VRK3-205ENST00000593919 EMG1Q92979 244 aaKnown RBP11.17□□□□□ -0.62
VRK3-205ENST00000593919 SEC22AQ96IW7 307 aa11.17□□□□□ -0.62
VRK3-205ENST00000593919 OR2V2Q96R30 315 aa11.17□□□□□ -0.62
VRK3-205ENST00000593919 EHFQ9NZC4 300 aa11.17□□□□□ -0.62
VRK3-205ENST00000593919 RPS10-NUDT3A0A1W2PQS6 291 aa11.16□□□□□ -0.62
VRK3-205ENST00000593919 LINC00862A6NCI5 91 aa11.16□□□□□ -0.62
VRK3-205ENST00000593919 RFPL4AA6NLU0 287 aa11.16□□□□□ -0.62
VRK3-205ENST00000593919 SERPINE3A8MV23 424 aa11.16□□□□□ -0.62
VRK3-205ENST00000593919 RFPL4AL1F8VTS6 287 aa11.16□□□□□ -0.62
VRK3-205ENST00000593919 RP2O75695 350 aa11.16□□□□□ -0.62
VRK3-205ENST00000593919 OR7C1O76099 320 aaPredicted RBP11.16□□□□□ -0.62
VRK3-205ENST00000593919 LOXP28300 417 aaPredicted RBP11.16□□□□□ -0.62
VRK3-205ENST00000593919 CHATP28329 748 aa11.16□□□□□ -0.62
VRK3-205ENST00000593919 AP2S1P53680 142 aaPredicted RBP11.16□□□□□ -0.62
VRK3-205ENST00000593919 ERVK11-1P61568 191 aa11.16□□□□□ -0.62
VRK3-205ENST00000593919 BAMBIQ13145 260 aa11.16□□□□□ -0.62
VRK3-205ENST00000593919 LRRC37A5PQ49AS3 106 aa11.16□□□□□ -0.62
VRK3-205ENST00000593919 SPRNQ5BIV9 151 aa11.16□□□□□ -0.62
VRK3-205ENST00000593919 LPCAT3Q6P1A2 487 aa11.16□□□□□ -0.62
VRK3-205ENST00000593919 WDR82Q6UXN9 313 aa11.16□□□□□ -0.62
VRK3-205ENST00000593919 Q8IYB0 196 aa11.16□□□□□ -0.62
VRK3-205ENST00000593919 FAM58AQ8N1B3 248 aa11.16□□□□□ -0.62
VRK3-205ENST00000593919 ARRDC1Q8N5I2 433 aa11.16□□□□□ -0.62
VRK3-205ENST00000593919 MITD1Q8WV92 249 aa11.16□□□□□ -0.62
VRK3-205ENST00000593919 PIK3IP1Q96FE7 263 aa11.16□□□□□ -0.62
VRK3-205ENST00000593919 NRIP2Q9BQI9 281 aa11.16□□□□□ -0.62
VRK3-205ENST00000593919 HDHD3Q9BSH5 251 aaPredicted RBP11.16□□□□□ -0.62
VRK3-205ENST00000593919 LRRK2Q5S007 2527 aa11.16□□□□□ -0.62
VRK3-205ENST00000593919 SNAPC5O75971 98 aa11.16□□□□□ -0.62
VRK3-205ENST00000593919 PTBP3O95758 552 aaKnown RBP11.16□□□□□ -0.62
VRK3-205ENST00000593919 IGHV1-46P01743 117 aa11.16□□□□□ -0.62
VRK3-205ENST00000593919 PI3P19957 117 aa11.16□□□□□ -0.62
VRK3-205ENST00000593919 DUSP1P28562 367 aa11.16□□□□□ -0.62
VRK3-205ENST00000593919 SERPINF1P36955 418 aa11.16□□□□□ -0.62
VRK3-205ENST00000593919 RBMXP38159 391 aaKnown RBP11.16□□□□□ -0.62
VRK3-205ENST00000593919 TAS2R31P59538 309 aa11.16□□□□□ -0.62
VRK3-205ENST00000593919 TAS2R46P59540 309 aa11.16□□□□□ -0.62
VRK3-205ENST00000593919 HOXA4Q00056 320 aaPredicted RBP11.16□□□□□ -0.62
VRK3-205ENST00000593919 FAHD2BQ6P2I3 314 aaPredicted RBP11.16□□□□□ -0.62
VRK3-205ENST00000593919 BRICD5Q6PL45 260 aa11.16□□□□□ -0.62
VRK3-205ENST00000593919 TMEM17Q86X19 198 aa11.16□□□□□ -0.62
VRK3-205ENST00000593919 FAHD2AQ96GK7 314 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms