RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 NRIP2Q9BQI9 281 aa9.94□□□□□ -0.82
DDX39A-219ENST00000592927 IFT22Q9H7X7 185 aa9.94□□□□□ -0.82
DDX39A-219ENST00000592927 PLEKHJ1Q9NW61 149 aa9.94□□□□□ -0.82
DDX39A-219ENST00000592927 RBFOX1Q9NWB1 397 aaKnown RBP9.94□□□□□ -0.82
DDX39A-219ENST00000592927 RASL12Q9NYN1 266 aa9.94□□□□□ -0.82
DDX39A-219ENST00000592927 WIPI2Q9Y4P8 454 aa9.94□□□□□ -0.82
DDX39A-219ENST00000592927 PPIAL4EA0A075B759 164 aa9.93□□□□□ -0.82
DDX39A-219ENST00000592927 ANKRD20A5PA0PJZ0 165 aa9.93□□□□□ -0.82
DDX39A-219ENST00000592927 MEIOCA2RUB1 952 aa9.93□□□□□ -0.82
DDX39A-219ENST00000592927 TMEM235A6NFC5 223 aa9.93□□□□□ -0.82
DDX39A-219ENST00000592927 NAP1L6A6NFF2 107 aa9.93□□□□□ -0.82
DDX39A-219ENST00000592927 VGLL3A8MV65 326 aa9.93□□□□□ -0.82
DDX39A-219ENST00000592927 PPIAL4DF5H284 164 aa9.93□□□□□ -0.82
DDX39A-219ENST00000592927 GEMIN2O14893 280 aaKnown RBP9.93□□□□□ -0.82
DDX39A-219ENST00000592927 PLA2G10O15496 165 aa9.93□□□□□ -0.82
DDX39A-219ENST00000592927 LYRM1O43325 122 aa9.93□□□□□ -0.82
DDX39A-219ENST00000592927 RHBDL1O75783 438 aa9.93□□□□□ -0.82
DDX39A-219ENST00000592927 ZNF205O95201 554 aa9.93□□□□□ -0.82
DDX39A-219ENST00000592927 PPIAL4FP0DN26 164 aa9.93□□□□□ -0.82
DDX39A-219ENST00000592927 FUT3P21217 361 aa9.93□□□□□ -0.82
DDX39A-219ENST00000592927 CHATP28329 748 aa9.93□□□□□ -0.82
DDX39A-219ENST00000592927 RCVRNP35243 200 aa9.93□□□□□ -0.82
DDX39A-219ENST00000592927 FAUP35544 74 aaKnown RBP9.93□□□□□ -0.82
DDX39A-219ENST00000592927 BTG1P62324 171 aa9.93□□□□□ -0.82
DDX39A-219ENST00000592927 KLF9Q13886 244 aaPredicted RBP9.93□□□□□ -0.82
DDX39A-219ENST00000592927 PIGYQ3MUY2 71 aa9.93□□□□□ -0.82
DDX39A-219ENST00000592927 RNASE12Q5GAN4 147 aaKnown RBP9.93□□□□□ -0.82
DDX39A-219ENST00000592927 SPIN3Q5JUX0 258 aa9.93□□□□□ -0.82
DDX39A-219ENST00000592927 HIST2H2BDQ6DRA6 164 aa9.93□□□□□ -0.82
DDX39A-219ENST00000592927 GCDHQ92947 438 aaPredicted RBP9.93□□□□□ -0.82
DDX39A-219ENST00000592927 HES4Q9HCC6 221 aa9.93□□□□□ -0.82
DDX39A-219ENST00000592927 KLK11Q9UBX7 282 aa9.93□□□□□ -0.82
DDX39A-219ENST00000592927 LPAR3Q9UBY5 353 aa9.93□□□□□ -0.82
DDX39A-219ENST00000592927 GLS2Q9UI32 602 aa9.93□□□□□ -0.82
DDX39A-219ENST00000592927 PPIAL4AQ9Y536 164 aa9.93□□□□□ -0.82
DDX39A-219ENST00000592927 C3orf80F5H4A9 247 aa9.92□□□□□ -0.82
DDX39A-219ENST00000592927 OR7C1O76099 320 aaPredicted RBP9.92□□□□□ -0.82
DDX39A-219ENST00000592927 NXPH2O95156 264 aa9.92□□□□□ -0.82
DDX39A-219ENST00000592927 LHBP01229 141 aa9.92□□□□□ -0.82
DDX39A-219ENST00000592927 IGHV2-70P01814 119 aa9.92□□□□□ -0.82
DDX39A-219ENST00000592927 PTHLHP12272 177 aa9.92□□□□□ -0.82
DDX39A-219ENST00000592927 USF1P22415 310 aaPredicted RBP9.92□□□□□ -0.82
DDX39A-219ENST00000592927 MDH2P40926 338 aaKnown RBP9.92□□□□□ -0.82
DDX39A-219ENST00000592927 TAS2R19P59542 299 aa9.92□□□□□ -0.82
DDX39A-219ENST00000592927 GMFBP60983 142 aa9.92□□□□□ -0.82
DDX39A-219ENST00000592927 ARFRP1Q13795 201 aa9.92□□□□□ -0.82
DDX39A-219ENST00000592927 ZNF146Q15072 292 aa9.92□□□□□ -0.82
DDX39A-219ENST00000592927 ZMYND11Q15326 602 aa9.92□□□□□ -0.82
DDX39A-219ENST00000592927 KCNJ8Q15842 424 aa9.92□□□□□ -0.82
DDX39A-219ENST00000592927 FAM201AQ5SY85 155 aa9.92□□□□□ -0.82
DDX39A-219ENST00000592927 SFRP4Q6FHJ7 346 aaPredicted RBP9.92□□□□□ -0.82
DDX39A-219ENST00000592927 SIGIRRQ6IA17 410 aa9.92□□□□□ -0.82
DDX39A-219ENST00000592927 DCDC5Q6ZRR9 648 aa9.92□□□□□ -0.82
DDX39A-219ENST00000592927 TRAPPC6BQ86SZ2 158 aa9.92□□□□□ -0.82
DDX39A-219ENST00000592927 FAM90A1Q86YD7 464 aa9.92□□□□□ -0.82
DDX39A-219ENST00000592927 CENPSQ8N2Z9 138 aa9.92□□□□□ -0.82
DDX39A-219ENST00000592927 MUC20Q8N307 709 aaPredicted RBP9.92□□□□□ -0.82
DDX39A-219ENST00000592927 GCSAMQ8N6F7 178 aa9.92□□□□□ -0.82
DDX39A-219ENST00000592927 TMEM229BQ8NBD8 167 aa9.92□□□□□ -0.82
DDX39A-219ENST00000592927 DEFB108BQ8NET1 73 aa9.92□□□□□ -0.82
DDX39A-219ENST00000592927 OCSTAMPQ9BR26 566 aa9.92□□□□□ -0.82
DDX39A-219ENST00000592927 CHST6Q9GZX3 395 aa9.92□□□□□ -0.82
DDX39A-219ENST00000592927 SHARPINQ9H0F6 387 aa9.92□□□□□ -0.82
DDX39A-219ENST00000592927 C11orf54Q9H0W9 315 aaPredicted RBP9.92□□□□□ -0.82
DDX39A-219ENST00000592927 NARFLQ9H6Q4 476 aa9.92□□□□□ -0.82
DDX39A-219ENST00000592927 ZMAT3Q9HA38 289 aaKnown RBP9.92□□□□□ -0.82
DDX39A-219ENST00000592927 SEBOXQ9HB31 216 aaPredicted RBP9.92□□□□□ -0.82
DDX39A-219ENST00000592927 RCC2Q9P258 522 aaKnown RBP9.92□□□□□ -0.82
DDX39A-219ENST00000592927 ANAPC10Q9UM13 185 aa9.92□□□□□ -0.82
DDX39A-219ENST00000592927 KCNK7Q9Y2U2 307 aa9.92□□□□□ -0.82
DDX39A-219ENST00000592927 TRAV38-1A0A0B4J264 116 aa9.91□□□□□ -0.82
DDX39A-219ENST00000592927 IGHV4-61A0A0C4DH41 118 aa9.91□□□□□ -0.82
DDX39A-219ENST00000592927 LINC00854A0A1B0GVQ3 168 aa9.91□□□□□ -0.82
DDX39A-219ENST00000592927 OOEPA6NGQ2 149 aa9.91□□□□□ -0.82
DDX39A-219ENST00000592927 POM121CA8CG34 1229 aa9.91□□□□□ -0.82
DDX39A-219ENST00000592927 SRRM5B3KS81 715 aa9.91□□□□□ -0.82
DDX39A-219ENST00000592927 F8VVB4 439 aa9.91□□□□□ -0.82
DDX39A-219ENST00000592927 F8VWA3 439 aa9.91□□□□□ -0.82
DDX39A-219ENST00000592927 LGALS8O00214 317 aa9.91□□□□□ -0.82
DDX39A-219ENST00000592927 FSTL3O95633 263 aa9.91□□□□□ -0.82
DDX39A-219ENST00000592927 KNG1P01042 644 aa9.91□□□□□ -0.82
DDX39A-219ENST00000592927 AKAIN1P0CW23 69 aa9.91□□□□□ -0.82
DDX39A-219ENST00000592927 NAT1P18440 290 aa9.91□□□□□ -0.82
DDX39A-219ENST00000592927 TBPP20226 339 aa9.91□□□□□ -0.82
DDX39A-219ENST00000592927 GLRA1P23415 457 aa9.91□□□□□ -0.82
DDX39A-219ENST00000592927 DTYMKP23919 212 aa9.91□□□□□ -0.82
DDX39A-219ENST00000592927 CD80P33681 288 aa9.91□□□□□ -0.82
DDX39A-219ENST00000592927 MRPS15P82914 257 aaKnown RBP9.91□□□□□ -0.82
DDX39A-219ENST00000592927 HOXA4Q00056 320 aaPredicted RBP9.91□□□□□ -0.82
DDX39A-219ENST00000592927 GUCA2AQ02747 115 aa9.91□□□□□ -0.82
DDX39A-219ENST00000592927 RBM39Q14498 530 aaKnown RBP9.91□□□□□ -0.82
DDX39A-219ENST00000592927 SMIM21Q3B7S5 101 aa9.91□□□□□ -0.82
DDX39A-219ENST00000592927 TMEM155Q4W5P6 130 aa9.91□□□□□ -0.82
DDX39A-219ENST00000592927 NKAPLQ5M9Q1 402 aa9.91□□□□□ -0.82
DDX39A-219ENST00000592927 OLFML2AQ68BL7 652 aa9.91□□□□□ -0.82
DDX39A-219ENST00000592927 Q6ZNX1 250 aa9.91□□□□□ -0.82
DDX39A-219ENST00000592927 C6orf201Q7Z4U5 140 aa9.91□□□□□ -0.82
DDX39A-219ENST00000592927 SPICQ8N5J4 248 aa9.91□□□□□ -0.82
DDX39A-219ENST00000592927 SGMS2Q8NHU3 365 aa9.91□□□□□ -0.82
DDX39A-219ENST00000592927 ENKURQ8TC29 256 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms