RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 MMP24Q9Y5R2 645 aa11.16□□□□□ -0.62
DNMT1-228ENST00000592705 TRAF3IP2O43734 574 aaPredicted RBP11.15□□□□□ -0.62
DNMT1-228ENST00000592705 OR7C2O60412 319 aa11.15□□□□□ -0.62
DNMT1-228ENST00000592705 LPAR6P43657 344 aa11.15□□□□□ -0.62
DNMT1-228ENST00000592705 PPP1CBP62140 327 aa11.15□□□□□ -0.62
DNMT1-228ENST00000592705 NAAAQ02083 359 aa11.15□□□□□ -0.62
DNMT1-228ENST00000592705 TMEM241Q24JQ0 296 aa11.15□□□□□ -0.62
DNMT1-228ENST00000592705 AWAT1Q58HT5 328 aa11.15□□□□□ -0.62
DNMT1-228ENST00000592705 WDR13Q9H1Z4 485 aa11.15□□□□□ -0.62
DNMT1-228ENST00000592705 ZDHHC11Q9H8X9 412 aa11.15□□□□□ -0.62
DNMT1-228ENST00000592705 MRPL22Q9NWU5 206 aaKnown RBP11.15□□□□□ -0.62
DNMT1-228ENST00000592705 CACNG5Q9UF02 275 aa11.15□□□□□ -0.62
DNMT1-228ENST00000592705 C4orf51C9J302 202 aa11.15□□□□□ -0.62
DNMT1-228ENST00000592705 SPP1P10451 314 aa11.15□□□□□ -0.62
DNMT1-228ENST00000592705 CEBPEQ15744 281 aa11.15□□□□□ -0.62
DNMT1-228ENST00000592705 UNQ9370/PRO34162Q6UXP9 181 aa11.15□□□□□ -0.62
DNMT1-228ENST00000592705 SLC25A38Q96DW6 304 aa11.15□□□□□ -0.62
DNMT1-228ENST00000592705 KCNMB2Q9Y691 235 aa11.15□□□□□ -0.62
DNMT1-228ENST00000592705 TRAV38-1A0A0B4J264 116 aa11.15□□□□□ -0.62
DNMT1-228ENST00000592705 NMBP08949 121 aa11.15□□□□□ -0.62
DNMT1-228ENST00000592705 RD3LP0DJH9 198 aa11.15□□□□□ -0.62
DNMT1-228ENST00000592705 UBE2G2P60604 165 aa11.15□□□□□ -0.62
DNMT1-228ENST00000592705 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.15□□□□□ -0.62
DNMT1-228ENST00000592705 TTTY12Q9BZ98 90 aa11.15□□□□□ -0.62
DNMT1-228ENST00000592705 IL17BQ9UHF5 180 aa11.15□□□□□ -0.62
DNMT1-228ENST00000592705 GPR37O15354 613 aa11.15□□□□□ -0.63
DNMT1-228ENST00000592705 FFAR4Q5NUL3 377 aa11.15□□□□□ -0.63
DNMT1-228ENST00000592705 DCAF12L2Q5VW00 463 aa11.15□□□□□ -0.63
DNMT1-228ENST00000592705 TBC1D26Q86UD7 250 aa11.15□□□□□ -0.63
DNMT1-228ENST00000592705 CBLN2Q8IUK8 224 aa11.15□□□□□ -0.63
DNMT1-228ENST00000592705 CHST5Q9GZS9 411 aa11.15□□□□□ -0.63
DNMT1-228ENST00000592705 MPC1Q9Y5U8 109 aa11.15□□□□□ -0.63
DNMT1-228ENST00000592705 MFNGO00587 321 aa11.14□□□□□ -0.63
DNMT1-228ENST00000592705 CLN5O75503 358 aa11.14□□□□□ -0.63
DNMT1-228ENST00000592705 TTRP02766 147 aa11.14□□□□□ -0.63
DNMT1-228ENST00000592705 CA6P23280 308 aa11.14□□□□□ -0.63
DNMT1-228ENST00000592705 POLR2GP62487 172 aaKnown RBP eCLIP11.14□□□□□ -0.63
DNMT1-228ENST00000592705 HLA-DRB3P79483 266 aa11.14□□□□□ -0.63
DNMT1-228ENST00000592705 ROM1Q03395 351 aa11.14□□□□□ -0.63
DNMT1-228ENST00000592705 ATP6V1FQ16864 119 aa11.14□□□□□ -0.63
DNMT1-228ENST00000592705 CLEC12BQ2HXU8 276 aa11.14□□□□□ -0.63
DNMT1-228ENST00000592705 TUSC1Q2TAM9 212 aa11.14□□□□□ -0.63
DNMT1-228ENST00000592705 FAM162BQ5T6X4 162 aa11.14□□□□□ -0.63
DNMT1-228ENST00000592705 TRAT1Q6PIZ9 186 aa11.14□□□□□ -0.63
DNMT1-228ENST00000592705 CHRDL1Q9BU40 450 aa11.14□□□□□ -0.63
DNMT1-228ENST00000592705 RAB33BQ9H082 229 aa11.14□□□□□ -0.63
DNMT1-228ENST00000592705 PCM1Q15154 2024 aa11.14□□□□□ -0.63
DNMT1-228ENST00000592705 TRDCB7Z8K6 153 aa11.14□□□□□ -0.63
DNMT1-228ENST00000592705 FABP4P15090 132 aa11.14□□□□□ -0.63
DNMT1-228ENST00000592705 TLE1Q04724 770 aa11.14□□□□□ -0.63
DNMT1-228ENST00000592705 PNRC1Q12796 327 aaPredicted RBP11.14□□□□□ -0.63
DNMT1-228ENST00000592705 SLC22A18ASQ8N1D0 253 aa11.14□□□□□ -0.63
DNMT1-228ENST00000592705 MRPL24Q96A35 216 aaKnown RBP11.14□□□□□ -0.63
DNMT1-228ENST00000592705 ZNF236Q9UL36 1845 aa11.14□□□□□ -0.63
DNMT1-228ENST00000592705 RALGAPA2Q2PPJ7 1873 aa11.14□□□□□ -0.63
DNMT1-228ENST00000592705 TRBV5-7A0A0A0MS05 114 aa11.14□□□□□ -0.63
DNMT1-228ENST00000592705 AP4M1O00189 453 aa11.14□□□□□ -0.63
DNMT1-228ENST00000592705 UPK3AO75631 287 aa11.14□□□□□ -0.63
DNMT1-228ENST00000592705 OR10D4PQ8NGN7 298 aa11.14□□□□□ -0.63
DNMT1-228ENST00000592705 FAM210BQ96KR6 192 aa11.14□□□□□ -0.63
DNMT1-228ENST00000592705 ATP5SQ99766 215 aa11.14□□□□□ -0.63
DNMT1-228ENST00000592705 F2RL2O00254 374 aa11.14□□□□□ -0.63
DNMT1-228ENST00000592705 SMIM10L1P0DMW3 83 aa11.14□□□□□ -0.63
DNMT1-228ENST00000592705 CCL3P10147 92 aa11.14□□□□□ -0.63
DNMT1-228ENST00000592705 ZNF17P17021 662 aa11.14□□□□□ -0.63
DNMT1-228ENST00000592705 CRYBA2P53672 197 aa11.14□□□□□ -0.63
DNMT1-228ENST00000592705 OR5B3Q8NH48 314 aa11.14□□□□□ -0.63
DNMT1-228ENST00000592705 SMIM10Q96HG1 83 aa11.14□□□□□ -0.63
DNMT1-228ENST00000592705 KCNE5Q9UJ90 142 aa11.14□□□□□ -0.63
DNMT1-228ENST00000592705 AMMECR1Q9Y4X0 333 aaPredicted RBP11.14□□□□□ -0.63
DNMT1-228ENST00000592705 PHOX2AO14813 284 aa11.13□□□□□ -0.63
DNMT1-228ENST00000592705 ZNF737O75373 536 aa11.13□□□□□ -0.63
DNMT1-228ENST00000592705 GALR1P47211 349 aa11.13□□□□□ -0.63
DNMT1-228ENST00000592705 DYNLT3P51808 116 aa11.13□□□□□ -0.63
DNMT1-228ENST00000592705 VAX1Q5SQQ9 334 aa11.13□□□□□ -0.63
DNMT1-228ENST00000592705 ZNF638Q14966 1978 aaKnown RBP11.13□□□□□ -0.63
DNMT1-228ENST00000592705 ZNF318Q5VUA4 2279 aa11.13□□□□□ -0.63
DNMT1-228ENST00000592705 GEMIN2O14893 280 aaKnown RBP11.13□□□□□ -0.63
DNMT1-228ENST00000592705 ST8SIA5O15466 376 aa11.13□□□□□ -0.63
DNMT1-228ENST00000592705 PATE4P0C8F1 98 aa11.13□□□□□ -0.63
DNMT1-228ENST00000592705 VDAC1P21796 283 aa11.13□□□□□ -0.63
DNMT1-228ENST00000592705 TPPP2P59282 170 aa11.13□□□□□ -0.63
DNMT1-228ENST00000592705 CFHR1Q03591 330 aa11.13□□□□□ -0.63
DNMT1-228ENST00000592705 COL19A1Q14993 1142 aa11.13□□□□□ -0.63
DNMT1-228ENST00000592705 ZNF66Q6ZN08 573 aa11.13□□□□□ -0.63
DNMT1-228ENST00000592705 OR2M3Q8NG83 312 aa11.13□□□□□ -0.63
DNMT1-228ENST00000592705 HEXA-AS1Q9H8Q6 139 aa11.13□□□□□ -0.63
DNMT1-228ENST00000592705 FZR1Q9UM11 496 aa11.13□□□□□ -0.63
DNMT1-228ENST00000592705 SEC11BP0C7V7 166 aa11.13□□□□□ -0.63
DNMT1-228ENST00000592705 CTSSP25774 331 aa11.13□□□□□ -0.63
DNMT1-228ENST00000592705 FOXO1Q12778 655 aa11.13□□□□□ -0.63
DNMT1-228ENST00000592705 NPAS1Q99742 590 aa11.13□□□□□ -0.63
DNMT1-228ENST00000592705 ZMIZ1Q9ULJ6 1067 aa11.13□□□□□ -0.63
DNMT1-228ENST00000592705 CDS2O95674 445 aa11.13□□□□□ -0.63
DNMT1-228ENST00000592705 OR5G3P0C626 314 aa11.13□□□□□ -0.63
DNMT1-228ENST00000592705 RANP62826 216 aaKnown RBP11.13□□□□□ -0.63
DNMT1-228ENST00000592705 TSPO2Q5TGU0 170 aa11.13□□□□□ -0.63
DNMT1-228ENST00000592705 C17orf78Q8N4C9 275 aa11.13□□□□□ -0.63
DNMT1-228ENST00000592705 TMEM104Q8NE00 496 aa11.13□□□□□ -0.63
DNMT1-228ENST00000592705 ABHD17AQ96GS6 310 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms