RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 CD276Q5ZPR3 534 aa12.58□□□□□ -0.4
ATG4D-211ENST00000589753 BTN2A1Q7KYR7 527 aa12.58□□□□□ -0.4
ATG4D-211ENST00000589753 IZUMO1Q8IYV9 350 aa12.58□□□□□ -0.4
ATG4D-211ENST00000589753 DTX3Q8N9I9 347 aa12.58□□□□□ -0.4
ATG4D-211ENST00000589753 PLPPR1Q8TBJ4 325 aa12.58□□□□□ -0.4
ATG4D-211ENST00000589753 CYYR1Q96J86 154 aa12.58□□□□□ -0.4
ATG4D-211ENST00000589753 ZMAT3Q9HA38 289 aaKnown RBP12.58□□□□□ -0.4
ATG4D-211ENST00000589753 ING3Q9NXR8 418 aa12.58□□□□□ -0.4
ATG4D-211ENST00000589753 PTTG2Q9NZH5 202 aa12.58□□□□□ -0.4
ATG4D-211ENST00000589753 EXTL2Q9UBQ6 330 aa12.58□□□□□ -0.4
ATG4D-211ENST00000589753 KCNK7Q9Y2U2 307 aa12.58□□□□□ -0.4
ATG4D-211ENST00000589753 LOC105371242A0A075B767 164 aa12.57□□□□□ -0.4
ATG4D-211ENST00000589753 SERPINE3A8MV23 424 aa12.57□□□□□ -0.4
ATG4D-211ENST00000589753 KIAA1324LA8MWY0 1029 aaPredicted RBP12.57□□□□□ -0.4
ATG4D-211ENST00000589753 MFNGO00587 321 aa12.57□□□□□ -0.4
ATG4D-211ENST00000589753 CA11O75493 328 aa12.57□□□□□ -0.4
ATG4D-211ENST00000589753 ECDO95905 644 aaPredicted RBP12.57□□□□□ -0.4
ATG4D-211ENST00000589753 ZFP36P26651 326 aaKnown RBP12.57□□□□□ -0.4
ATG4D-211ENST00000589753 P2RX3P56373 397 aa12.57□□□□□ -0.4
ATG4D-211ENST00000589753 LCN2P80188 198 aa12.57□□□□□ -0.4
ATG4D-211ENST00000589753 PAX5Q02548 391 aa12.57□□□□□ -0.4
ATG4D-211ENST00000589753 KRBOX4Q5JUW0 171 aa12.57□□□□□ -0.4
ATG4D-211ENST00000589753 RSBN1Q5VWQ0 802 aaPredicted RBP12.57□□□□□ -0.4
ATG4D-211ENST00000589753 SLC35E4Q6ICL7 350 aa12.57□□□□□ -0.4
ATG4D-211ENST00000589753 CNIH2Q6PI25 160 aa12.57□□□□□ -0.4
ATG4D-211ENST00000589753 CIARTQ8N365 385 aaPredicted RBP12.57□□□□□ -0.4
ATG4D-211ENST00000589753 TPRX1Q8N7U7 411 aa12.57□□□□□ -0.4
ATG4D-211ENST00000589753 OR4M1Q8NGD0 313 aa12.57□□□□□ -0.4
ATG4D-211ENST00000589753 DYRK2Q92630 601 aa12.57□□□□□ -0.4
ATG4D-211ENST00000589753 COQ2Q96H96 371 aa12.57□□□□□ -0.4
ATG4D-211ENST00000589753 C1orf159Q96HA4 380 aa12.57□□□□□ -0.4
ATG4D-211ENST00000589753 DIRAS2Q96HU8 199 aa12.57□□□□□ -0.4
ATG4D-211ENST00000589753 WDFY2Q96P53 400 aa12.57□□□□□ -0.4
ATG4D-211ENST00000589753 DCTN5Q9BTE1 182 aa12.57□□□□□ -0.4
ATG4D-211ENST00000589753 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.57□□□□□ -0.4
ATG4D-211ENST00000589753 AK3Q9UIJ7 227 aa12.57□□□□□ -0.4
ATG4D-211ENST00000589753 TRBV23-1A0A0A0MS06 115 aa12.56□□□□□ -0.4
ATG4D-211ENST00000589753 TMEM30CPA0ZSE6 113 aa12.56□□□□□ -0.4
ATG4D-211ENST00000589753 B4DSR2 109 aa12.56□□□□□ -0.4
ATG4D-211ENST00000589753 SMAD7O15105 426 aaKnown RBP12.56□□□□□ -0.4
ATG4D-211ENST00000589753 GSTP1P09211 210 aaKnown RBP12.56□□□□□ -0.4
ATG4D-211ENST00000589753 TNFSF8P32971 234 aa12.56□□□□□ -0.4
ATG4D-211ENST00000589753 GLIPR1P48060 266 aa12.56□□□□□ -0.4
ATG4D-211ENST00000589753 TAS2R20P59543 309 aa12.56□□□□□ -0.4
ATG4D-211ENST00000589753 RPL31P62899 125 aaKnown RBP12.56□□□□□ -0.4
ATG4D-211ENST00000589753 TMEM249Q2WGJ8 235 aa12.56□□□□□ -0.4
ATG4D-211ENST00000589753 ZNF260Q3ZCT1 412 aa12.56□□□□□ -0.4
ATG4D-211ENST00000589753 OLFML2AQ68BL7 652 aa12.56□□□□□ -0.4
ATG4D-211ENST00000589753 ZNF497Q6ZNH5 498 aa12.56□□□□□ -0.4
ATG4D-211ENST00000589753 OR6Q1Q8NGQ2 317 aa12.56□□□□□ -0.4
ATG4D-211ENST00000589753 LPAR2Q9HBW0 351 aa12.56□□□□□ -0.4
ATG4D-211ENST00000589753 C19orf12Q9NSK7 152 aa12.56□□□□□ -0.4
ATG4D-211ENST00000589753 KIF25Q9UIL4 384 aa12.56□□□□□ -0.4
ATG4D-211ENST00000589753 RPUSD1Q9UJJ7 312 aaKnown RBP12.56□□□□□ -0.4
ATG4D-211ENST00000589753 POLR3KQ9Y2Y1 108 aaPredicted RBP12.56□□□□□ -0.4
ATG4D-211ENST00000589753 MEIKINA0A087WXM9 373 aa12.55□□□□□ -0.4
ATG4D-211ENST00000589753 ODAMA1E959 279 aa12.55□□□□□ -0.4
ATG4D-211ENST00000589753 TMEM235A6NFC5 223 aa12.55□□□□□ -0.4
ATG4D-211ENST00000589753 C22orf46C9J442 243 aa12.55□□□□□ -0.4
ATG4D-211ENST00000589753 MSMBP08118 114 aa12.55□□□□□ -0.4
ATG4D-211ENST00000589753 CD3GP09693 182 aa12.55□□□□□ -0.4
ATG4D-211ENST00000589753 MNDAP41218 407 aa12.55□□□□□ -0.4
ATG4D-211ENST00000589753 GZMKP49863 264 aa12.55□□□□□ -0.4
ATG4D-211ENST00000589753 MRPS15P82914 257 aaKnown RBP12.55□□□□□ -0.4
ATG4D-211ENST00000589753 MEF2CQ06413 473 aaPredicted RBP12.55□□□□□ -0.4
ATG4D-211ENST00000589753 MADCAM1Q13477 382 aa12.55□□□□□ -0.4
ATG4D-211ENST00000589753 ARFRP1Q13795 201 aa12.55□□□□□ -0.4
ATG4D-211ENST00000589753 PNLIPRP3Q17RR3 467 aa12.55□□□□□ -0.4
ATG4D-211ENST00000589753 HACD4Q5VWC8 232 aa12.55□□□□□ -0.4
ATG4D-211ENST00000589753 SPNS3Q6ZMD2 512 aa12.55□□□□□ -0.4
ATG4D-211ENST00000589753 FAM185AQ8N0U4 392 aa12.55□□□□□ -0.4
ATG4D-211ENST00000589753 LINC01356Q8N9X3 169 aa12.55□□□□□ -0.4
ATG4D-211ENST00000589753 C8orf46Q8TAG6 207 aa12.55□□□□□ -0.4
ATG4D-211ENST00000589753 CMSS1Q9BQ75 279 aaKnown RBP12.55□□□□□ -0.4
ATG4D-211ENST00000589753 RIMS4Q9H426 269 aaPredicted RBP12.55□□□□□ -0.4
ATG4D-211ENST00000589753 NCOR1P1Q9H4R4 102 aa12.55□□□□□ -0.4
ATG4D-211ENST00000589753 AUNIPQ9H7T9 357 aa12.55□□□□□ -0.4
ATG4D-211ENST00000589753 LPAR3Q9UBY5 353 aa12.55□□□□□ -0.4
ATG4D-211ENST00000589753 MRPS7Q9Y2R9 242 aaKnown RBP12.55□□□□□ -0.4
ATG4D-211ENST00000589753 A0A1W2PQ09 198 aa12.54□□□□□ -0.4
ATG4D-211ENST00000589753 hADV38S2A0JD32 116 aa12.54□□□□□ -0.4
ATG4D-211ENST00000589753 ENSAO43768 121 aaKnown RBP12.54□□□□□ -0.4
ATG4D-211ENST00000589753 MT-ND4P03905 459 aa12.54□□□□□ -0.4
ATG4D-211ENST00000589753 IGHV4-31P0DP07 118 aa12.54□□□□□ -0.4
ATG4D-211ENST00000589753 GNG2P59768 71 aa12.54□□□□□ -0.4
ATG4D-211ENST00000589753 BAIAP2L2Q6UXY1 529 aa12.54□□□□□ -0.4
ATG4D-211ENST00000589753 GAPTQ8N292 157 aa12.54□□□□□ -0.4
ATG4D-211ENST00000589753 LY6G5BQ8NDX9 201 aa12.54□□□□□ -0.4
ATG4D-211ENST00000589753 MRPL30Q8TCC3 161 aaKnown RBP12.54□□□□□ -0.4
ATG4D-211ENST00000589753 COX4I2Q96KJ9 171 aa12.54□□□□□ -0.4
ATG4D-211ENST00000589753 CHMP1AQ9HD42 196 aaPredicted RBP12.54□□□□□ -0.4
ATG4D-211ENST00000589753 C12orf4Q9NQ89 552 aa12.54□□□□□ -0.4
ATG4D-211ENST00000589753 OR6C3Q9NZP0 311 aa12.54□□□□□ -0.4
ATG4D-211ENST00000589753 ELF5Q9UKW6 265 aaPredicted RBP12.54□□□□□ -0.4
ATG4D-211ENST00000589753 CR1P17927 2039 aa12.54□□□□□ -0.4
ATG4D-211ENST00000589753 TRGV10A0A0A0MS01 117 aa12.53□□□□□ -0.4
ATG4D-211ENST00000589753 PPIAL4CA0A0B4J2A2 164 aa12.53□□□□□ -0.4
ATG4D-211ENST00000589753 IGHV2-70DA0A0C4DH43 119 aa12.53□□□□□ -0.4
ATG4D-211ENST00000589753 FABP12A6NFH5 140 aa12.53□□□□□ -0.4
ATG4D-211ENST00000589753 TPPPO94811 219 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms