RNA–Protein interactions for RNA: ENST00000588713.1

LIG3-211, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-211ENST00000588713 NOTCH3Q9UM47 2321 aa3.58□□□□□ -1.84
LIG3-211ENST00000588713 TENM3Q9P273 2699 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 IGLV1-36A0A0B4J1U3 117 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 A0A1B0GV90 55 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 C13orf42A0A1B0GVH6 325 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 ZNF860A6NHJ4 632 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 NPIPB13A6NJU9 1138 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 OR5H1A6NKK0 313 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 IFITM10A6NMD0 228 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 ZNF726A6NNF4 738 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 TMEM14DPA8MWL7 114 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 NPIPB4C9JG80 1138 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 C9JQL5 133 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 K7EPK0 472 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 K7N7A8 449 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 XKRYO14609 159 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 ZNF264O43296 627 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 FGF17O60258 216 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 GPR137BO60478 399 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 ZNF354AO60765 605 aaPredicted RBP3.57□□□□□ -1.84
LIG3-211ENST00000588713 CA11O75493 328 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 DEDDO75618 318 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 GPR75O95800 540 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 GPANK1O95872 356 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 PLAUP00749 431 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 CSTAP01040 98 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 TGFAP01135 160 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 SERPINA5P05154 406 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 CSN2P05814 226 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 HEXBP07686 556 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 CHRM2P08172 466 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 SPARCP09486 303 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 DANCRP0C864 163 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 SLC35E2P0CK97 266 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 RNH1P13489 461 aaKnown RBP3.57□□□□□ -1.84
LIG3-211ENST00000588713 RPS2P15880 293 aaKnown RBP3.57□□□□□ -1.84
LIG3-211ENST00000588713 HIST1H1DP16402 221 aaKnown RBP3.57□□□□□ -1.84
LIG3-211ENST00000588713 ZNF708P17019 499 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 AKR1C4P17516 323 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 CRYGSP22914 178 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 RPL12P30050 165 aaKnown RBP3.57□□□□□ -1.84
LIG3-211ENST00000588713 FCGR2CP31995 323 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 GABRA3P34903 492 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 P2RY1P47900 373 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 SLC6A8P48029 635 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 CAMLGP49069 296 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 RAB38P57729 211 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 LOXL3P58215 753 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 OR2B8PP59922 312 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 CTXN1P60606 82 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 S100A10P60903 97 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 SUPT4H1P63272 117 aaKnown RBP3.57□□□□□ -1.84
LIG3-211ENST00000588713 QRFPP83859 136 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 RPL18Q07020 188 aaKnown RBP3.57□□□□□ -1.84
LIG3-211ENST00000588713 MGAT2Q10469 447 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 FOXL1Q12952 345 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 RAB32Q13637 225 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 FAM53BQ14153 422 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 KIR2DS3Q14952 304 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 ARL6IP1Q15041 203 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 RSU1Q15404 277 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 MEP1BQ16820 701 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.57□□□□□ -1.84
LIG3-211ENST00000588713 MSMPQ1L6U9 139 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 MOGAT2Q3SYC2 334 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 TRMT12Q53H54 448 aaKnown RBP3.57□□□□□ -1.84
LIG3-211ENST00000588713 GLYATL3Q5SZD4 288 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 NCMAPQ5T1S8 102 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 FNDC7Q5VTL7 733 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 DNM1P34Q6PK57 102 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 DEGS2Q6QHC5 323 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 CLEC2AQ6UVW9 174 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 PLXDC2Q6UX71 529 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 ETV3LQ6ZN32 361 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 RNF44Q7L0R7 432 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 DPY19L4Q7Z388 723 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 ZAR1Q86SH2 424 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 C9orf40Q8IXQ3 194 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 C1orf87Q8N0U7 546 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 SLC22A24Q8N4F4 322 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 JAGN1Q8N5M9 183 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 FAM71E2Q8N5Q1 922 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 FAM24BQ8N5W8 94 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 ZNF614Q8N883 585 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 SUMF2Q8NBJ7 301 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 BEND2Q8NDZ0 799 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 EXPH5Q8NEV8 1989 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 OR4S1Q8NGB4 309 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 OR52R1Q8NGF1 315 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 OR5H2Q8NGV7 314 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 OR4K15Q8NH41 348 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 OR51F2Q8NH61 342 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 OR6X1Q8NH79 312 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 TERB2Q8NHR7 220 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 ZNF519Q8TB69 540 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 FNDC9Q8TBE3 224 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 ZCCHC10Q8TBK6 192 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 MARCH1Q8TCQ1 289 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 METTL21AQ8WXB1 218 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 MAFIPQ8WZ33 124 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms