RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 SLC25A30Q5SVS4 291 aa15.35■□□□□ 0.05
TRAF4-216ENST00000586813 OR51T1Q8NGJ9 327 aa15.35■□□□□ 0.05
TRAF4-216ENST00000586813 OR56B4Q8NH76 319 aa15.35■□□□□ 0.05
TRAF4-216ENST00000586813 HRASLS5Q96KN8 279 aa15.35■□□□□ 0.05
TRAF4-216ENST00000586813 NBEAL2Q6ZNJ1 2754 aa15.34■□□□□ 0.05
TRAF4-216ENST00000586813 FAM90A18PA6NE21 464 aa15.34■□□□□ 0.05
TRAF4-216ENST00000586813 FAM90A16PA6NEW6 464 aa15.34■□□□□ 0.05
TRAF4-216ENST00000586813 FAM90A20PA6NIJ5 464 aa15.34■□□□□ 0.05
TRAF4-216ENST00000586813 FAM90A9PA6NNJ1 464 aa15.34■□□□□ 0.05
TRAF4-216ENST00000586813 FAM90A12PA8MX19 464 aa15.34■□□□□ 0.05
TRAF4-216ENST00000586813 FAM90A5PA8MXJ8 464 aa15.34■□□□□ 0.05
TRAF4-216ENST00000586813 H0YJX3 145 aa15.34■□□□□ 0.05
TRAF4-216ENST00000586813 SULT1B1O43704 296 aa15.34■□□□□ 0.05
TRAF4-216ENST00000586813 FAM90A15PP0C7V4 464 aa15.34■□□□□ 0.05
TRAF4-216ENST00000586813 FAM90A13PP0C7W8 464 aa15.34■□□□□ 0.05
TRAF4-216ENST00000586813 FAM90A14PP0C7W9 464 aa15.34■□□□□ 0.05
TRAF4-216ENST00000586813 FAM90A24PP0C7X0 464 aa15.34■□□□□ 0.05
TRAF4-216ENST00000586813 DBTP11182 482 aaKnown RBP15.34■□□□□ 0.05
TRAF4-216ENST00000586813 MTNR1BP49286 362 aa15.34■□□□□ 0.05
TRAF4-216ENST00000586813 RASSF2P50749 326 aa15.34■□□□□ 0.05
TRAF4-216ENST00000586813 SNRPGP62308 76 aaKnown RBP15.34■□□□□ 0.05
TRAF4-216ENST00000586813 KISS1Q15726 138 aa15.34■□□□□ 0.05
TRAF4-216ENST00000586813 DEFB121Q5J5C9 76 aa15.34■□□□□ 0.05
TRAF4-216ENST00000586813 MEDAGQ5VYS4 303 aa15.34■□□□□ 0.05
TRAF4-216ENST00000586813 ZNF329Q86UD4 541 aa15.34■□□□□ 0.05
TRAF4-216ENST00000586813 THNSL2Q86YJ6 484 aa15.34■□□□□ 0.05
TRAF4-216ENST00000586813 MRPL41Q8IXM3 137 aaKnown RBP15.34■□□□□ 0.05
TRAF4-216ENST00000586813 OR51D1Q8NGF3 324 aa15.34■□□□□ 0.05
TRAF4-216ENST00000586813 OR13A1Q8NGR1 328 aa15.34■□□□□ 0.05
TRAF4-216ENST00000586813 LEAP2Q969E1 77 aa15.34■□□□□ 0.05
TRAF4-216ENST00000586813 ZNF649Q9BS31 505 aa15.34■□□□□ 0.05
TRAF4-216ENST00000586813 GPR61Q9BZJ8 451 aa15.34■□□□□ 0.05
TRAF4-216ENST00000586813 CALYQ9NYX4 217 aa15.34■□□□□ 0.05
TRAF4-216ENST00000586813 KIF25Q9UIL4 384 aa15.34■□□□□ 0.05
TRAF4-216ENST00000586813 MEIKINA0A087WXM9 373 aa15.33■□□□□ 0.04
TRAF4-216ENST00000586813 A0A1W2PPI3 338 aa15.33■□□□□ 0.04
TRAF4-216ENST00000586813 J3QR06 171 aa15.33■□□□□ 0.04
TRAF4-216ENST00000586813 ALPLP05186 524 aa15.33■□□□□ 0.04
TRAF4-216ENST00000586813 RPL23AP62750 156 aaKnown RBP15.33■□□□□ 0.04
TRAF4-216ENST00000586813 PAN3Q58A45 887 aaKnown RBP15.33■□□□□ 0.04
TRAF4-216ENST00000586813 ZNF691Q5VV52 312 aa15.33■□□□□ 0.04
TRAF4-216ENST00000586813 SERPINA12Q8IW75 414 aa15.33■□□□□ 0.04
TRAF4-216ENST00000586813 DRAM1Q8N682 238 aa15.33■□□□□ 0.04
TRAF4-216ENST00000586813 C5orf56Q8N8D9 126 aa15.33■□□□□ 0.04
TRAF4-216ENST00000586813 ZNF565Q8N9K5 539 aa15.33■□□□□ 0.04
TRAF4-216ENST00000586813 OR5D14Q8NGL3 314 aa15.33■□□□□ 0.04
TRAF4-216ENST00000586813 DPF1Q92782 380 aa15.33■□□□□ 0.04
TRAF4-216ENST00000586813 EXOGQ9Y2C4 368 aaKnown RBP15.33■□□□□ 0.04
TRAF4-216ENST00000586813 TRAV24A0A0B4J272 114 aa15.32■□□□□ 0.04
TRAF4-216ENST00000586813 IL1AP01583 271 aa15.32■□□□□ 0.04
TRAF4-216ENST00000586813 IGHV3-7P01780 117 aa15.32■□□□□ 0.04
TRAF4-216ENST00000586813 TMEM11P17152 192 aa15.32■□□□□ 0.04
TRAF4-216ENST00000586813 THBS3P49746 956 aa15.32■□□□□ 0.04
TRAF4-216ENST00000586813 MADCAM1Q13477 382 aa15.32■□□□□ 0.04
TRAF4-216ENST00000586813 LPCAT4Q643R3 524 aa15.32■□□□□ 0.04
TRAF4-216ENST00000586813 ELP2Q6IA86 826 aa15.32■□□□□ 0.04
TRAF4-216ENST00000586813 OR2W3Q7Z3T1 314 aa15.32■□□□□ 0.04
TRAF4-216ENST00000586813 PARP16Q8N5Y8 322 aa15.32■□□□□ 0.04
TRAF4-216ENST00000586813 CHPT1Q8WUD6 406 aa15.32■□□□□ 0.04
TRAF4-216ENST00000586813 LGALS12Q96DT0 336 aa15.32■□□□□ 0.04
TRAF4-216ENST00000586813 MRPL48Q96GC5 212 aaKnown RBP15.32■□□□□ 0.04
TRAF4-216ENST00000586813 NOL4LQ96MY1 436 aaPredicted RBP15.32■□□□□ 0.04
TRAF4-216ENST00000586813 NR1H4Q96RI1 486 aaPredicted RBP15.32■□□□□ 0.04
TRAF4-216ENST00000586813 ALG8Q9BVK2 526 aa15.32■□□□□ 0.04
TRAF4-216ENST00000586813 NCOR1P1Q9H4R4 102 aa15.32■□□□□ 0.04
TRAF4-216ENST00000586813 LINC00574Q9H8X3 128 aa15.32■□□□□ 0.04
TRAF4-216ENST00000586813 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.32■□□□□ 0.04
TRAF4-216ENST00000586813 IDI2-AS1Q9NZ38 188 aa15.32■□□□□ 0.04
TRAF4-216ENST00000586813 PSG11Q9UQ72 335 aa15.32■□□□□ 0.04
TRAF4-216ENST00000586813 ORC6Q9Y5N6 252 aa15.32■□□□□ 0.04
TRAF4-216ENST00000586813 SNTNA6NMZ2 147 aa15.31■□□□□ 0.04
TRAF4-216ENST00000586813 E9PQ18 207 aa15.31■□□□□ 0.04
TRAF4-216ENST00000586813 EI24O14681 340 aa15.31■□□□□ 0.04
TRAF4-216ENST00000586813 ZFPL1O95159 310 aa15.31■□□□□ 0.04
TRAF4-216ENST00000586813 C21orf33P30042 268 aaPredicted RBP15.31■□□□□ 0.04
TRAF4-216ENST00000586813 DIAPH2-AS1Q14236 149 aa15.31■□□□□ 0.04
TRAF4-216ENST00000586813 GALEQ14376 348 aa15.31■□□□□ 0.04
TRAF4-216ENST00000586813 HES1Q14469 280 aa15.31■□□□□ 0.04
TRAF4-216ENST00000586813 ZSCAN26Q16670 478 aa15.31■□□□□ 0.04
TRAF4-216ENST00000586813 LHFPL3Q86UP9 236 aa15.31■□□□□ 0.04
TRAF4-216ENST00000586813 SYS1Q8N2H4 156 aa15.31■□□□□ 0.04
TRAF4-216ENST00000586813 PXT1Q8NFP0 134 aa15.31■□□□□ 0.04
TRAF4-216ENST00000586813 CNIH3Q8TBE1 160 aa15.31■□□□□ 0.04
TRAF4-216ENST00000586813 BARHL1Q9BZE3 327 aa15.31■□□□□ 0.04
TRAF4-216ENST00000586813 ISG20L2Q9H9L3 353 aaKnown RBP15.31■□□□□ 0.04
TRAF4-216ENST00000586813 TMEM212A6NML5 194 aa15.3■□□□□ 0.04
TRAF4-216ENST00000586813 NPIPB11E5RHQ5 1161 aa15.3■□□□□ 0.04
TRAF4-216ENST00000586813 FGF16O43320 207 aa15.3■□□□□ 0.04
TRAF4-216ENST00000586813 RPSAP08865 295 aaKnown RBP15.3■□□□□ 0.04
TRAF4-216ENST00000586813 GNG10P50151 68 aa15.3■□□□□ 0.04
TRAF4-216ENST00000586813 RAB7AP51149 207 aa15.3■□□□□ 0.04
TRAF4-216ENST00000586813 PAX5Q02548 391 aa15.3■□□□□ 0.04
TRAF4-216ENST00000586813 IL13RA2Q14627 380 aa15.3■□□□□ 0.04
TRAF4-216ENST00000586813 LTC4SQ16873 150 aa15.3■□□□□ 0.04
TRAF4-216ENST00000586813 RSBN1Q5VWQ0 802 aaPredicted RBP15.3■□□□□ 0.04
TRAF4-216ENST00000586813 C18orf65Q6ZTR6 163 aa15.3■□□□□ 0.04
TRAF4-216ENST00000586813 C8orf86Q6ZUL3 223 aa15.3■□□□□ 0.04
TRAF4-216ENST00000586813 OR8H3Q8N146 312 aa15.3■□□□□ 0.04
TRAF4-216ENST00000586813 HAVCR2Q8TDQ0 301 aa15.3■□□□□ 0.04
TRAF4-216ENST00000586813 MRGPRDQ8TDS7 321 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms