RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 OVCH2Q7RTZ1 564 aa7.89□□□□□ -1.15
SS18-220ENST00000582092 RTN4RL2Q86UN3 420 aa7.89□□□□□ -1.15
SS18-220ENST00000582092 ZNF565Q8N9K5 539 aa7.89□□□□□ -1.15
SS18-220ENST00000582092 SUMF2Q8NBJ7 301 aa7.89□□□□□ -1.15
SS18-220ENST00000582092 OR13C8Q8NGS7 320 aa7.89□□□□□ -1.15
SS18-220ENST00000582092 OR2T35Q8NGX2 323 aa7.89□□□□□ -1.15
SS18-220ENST00000582092 ZNF488Q96MN9 340 aa7.89□□□□□ -1.15
SS18-220ENST00000582092 SYT3Q9BQG1 590 aa7.89□□□□□ -1.15
SS18-220ENST00000582092 DPCDQ9BVM2 203 aaPredicted RBP7.89□□□□□ -1.15
SS18-220ENST00000582092 FGF23Q9GZV9 251 aaPredicted RBP7.89□□□□□ -1.15
SS18-220ENST00000582092 FN3KRPQ9HA64 309 aa7.89□□□□□ -1.15
SS18-220ENST00000582092 KCNIP1Q9NZI2 227 aa7.89□□□□□ -1.15
SS18-220ENST00000582092 TAAR3PQ9P1P4 343 aa7.89□□□□□ -1.15
SS18-220ENST00000582092 VSIG4Q9Y279 399 aa7.89□□□□□ -1.15
SS18-220ENST00000582092 UTP20O75691 2785 aaKnown RBP7.88□□□□□ -1.15
SS18-220ENST00000582092 IGHV3-64DA0A0J9YX35 117 aa7.88□□□□□ -1.15
SS18-220ENST00000582092 C9orf170A2RU37 121 aa7.88□□□□□ -1.15
SS18-220ENST00000582092 C5orf51A6NDU8 294 aa7.88□□□□□ -1.15
SS18-220ENST00000582092 OR2AT4A6NND4 320 aa7.88□□□□□ -1.15
SS18-220ENST00000582092 POM121CA8CG34 1229 aa7.88□□□□□ -1.15
SS18-220ENST00000582092 TRDCB7Z8K6 153 aa7.88□□□□□ -1.15
SS18-220ENST00000582092 SMLR1H3BR10 107 aa7.88□□□□□ -1.15
SS18-220ENST00000582092 C19orf84I3L1E1 186 aa7.88□□□□□ -1.15
SS18-220ENST00000582092 SIRPB1O00241 398 aa7.88□□□□□ -1.15
SS18-220ENST00000582092 RHBDL1O75783 438 aa7.88□□□□□ -1.15
SS18-220ENST00000582092 KNG1P01042 644 aa7.88□□□□□ -1.15
SS18-220ENST00000582092 IGHV3-13P01766 116 aa7.88□□□□□ -1.15
SS18-220ENST00000582092 PGA5P0DJD9 388 aa7.88□□□□□ -1.15
SS18-220ENST00000582092 IRF2P14316 349 aa7.88□□□□□ -1.15
SS18-220ENST00000582092 ZNF250P15622 560 aa7.88□□□□□ -1.15
SS18-220ENST00000582092 CXCL3P19876 107 aa7.88□□□□□ -1.15
SS18-220ENST00000582092 FCGR2CP31995 323 aa7.88□□□□□ -1.15
SS18-220ENST00000582092 RBMXP38159 391 aaKnown RBP7.88□□□□□ -1.15
SS18-220ENST00000582092 GZMKP49863 264 aa7.88□□□□□ -1.15
SS18-220ENST00000582092 FXYD4P59646 89 aa7.88□□□□□ -1.15
SS18-220ENST00000582092 FGL1Q08830 312 aa7.88□□□□□ -1.15
SS18-220ENST00000582092 DHRS2Q13268 280 aa7.88□□□□□ -1.15
SS18-220ENST00000582092 CDSNQ15517 529 aa7.88□□□□□ -1.15
SS18-220ENST00000582092 SMIM21Q3B7S5 101 aa7.88□□□□□ -1.15
SS18-220ENST00000582092 FAM76BQ5HYJ3 339 aa7.88□□□□□ -1.15
SS18-220ENST00000582092 SEZ6L2Q6UXD5 910 aa7.88□□□□□ -1.15
SS18-220ENST00000582092 GSG1LQ6UXU4 331 aa7.88□□□□□ -1.15
SS18-220ENST00000582092 C17orf107Q6ZR85 190 aa7.88□□□□□ -1.15
SS18-220ENST00000582092 DMRTC2Q8IXT2 367 aaPredicted RBP7.88□□□□□ -1.15
SS18-220ENST00000582092 BOLLQ8N9W6 283 aaKnown RBP7.88□□□□□ -1.15
SS18-220ENST00000582092 CCDC71LQ8N9Z2 235 aa7.88□□□□□ -1.15
SS18-220ENST00000582092 POC1AQ8NBT0 407 aa7.88□□□□□ -1.15
SS18-220ENST00000582092 TMEM185AQ8NFB2 350 aa7.88□□□□□ -1.15
SS18-220ENST00000582092 OR11L1Q8NGX0 322 aa7.88□□□□□ -1.15
SS18-220ENST00000582092 PPP1R35Q8TAP8 253 aa7.88□□□□□ -1.15
SS18-220ENST00000582092 DYRK2Q92630 601 aa7.88□□□□□ -1.15
SS18-220ENST00000582092 GTF3AQ92664 365 aaKnown RBP7.88□□□□□ -1.15
SS18-220ENST00000582092 TOMM40LQ969M1 308 aa7.88□□□□□ -1.15
SS18-220ENST00000582092 ELMOD3Q96FG2 381 aa7.88□□□□□ -1.15
SS18-220ENST00000582092 VRK1Q99986 396 aaPredicted RBP7.88□□□□□ -1.15
SS18-220ENST00000582092 DHRS9Q9BPW9 319 aa7.88□□□□□ -1.15
SS18-220ENST00000582092 TRAF4Q9BUZ4 470 aaPredicted RBP7.88□□□□□ -1.15
SS18-220ENST00000582092 ESRP2Q9H6T0 727 aaKnown RBP7.88□□□□□ -1.15
SS18-220ENST00000582092 METTL8Q9H825 291 aaKnown RBP7.88□□□□□ -1.15
SS18-220ENST00000582092 DLL4Q9NR61 685 aa7.88□□□□□ -1.15
SS18-220ENST00000582092 C1orf123Q9NWV4 160 aa7.88□□□□□ -1.15
SS18-220ENST00000582092 RASL12Q9NYN1 266 aa7.88□□□□□ -1.15
SS18-220ENST00000582092 DNAJB11Q9UBS4 358 aa7.88□□□□□ -1.15
SS18-220ENST00000582092 TRAPPC2LQ9UL33 140 aa7.88□□□□□ -1.15
SS18-220ENST00000582092 GPR132Q9UNW8 380 aa7.88□□□□□ -1.15
SS18-220ENST00000582092 MAST4O15021 2626 aa7.88□□□□□ -1.15
SS18-220ENST00000582092 UNC79Q9P2D8 2635 aa7.87□□□□□ -1.15
SS18-220ENST00000582092 SPENQ96T58 3664 aaKnown RBP7.87□□□□□ -1.15
SS18-220ENST00000582092 ATP6V1G2-DDX39BF2Z307 99 aa7.87□□□□□ -1.15
SS18-220ENST00000582092 F8VVB4 439 aa7.87□□□□□ -1.15
SS18-220ENST00000582092 F8VWA3 439 aa7.87□□□□□ -1.15
SS18-220ENST00000582092 ABCD4O14678 606 aa7.87□□□□□ -1.15
SS18-220ENST00000582092 BET1O15155 118 aa7.87□□□□□ -1.15
SS18-220ENST00000582092 HSPA12AO43301 675 aa7.87□□□□□ -1.15
SS18-220ENST00000582092 SPRY3O43610 288 aa7.87□□□□□ -1.15
SS18-220ENST00000582092 NOS1APO75052 506 aaPredicted RBP7.87□□□□□ -1.15
SS18-220ENST00000582092 RGS11O94810 467 aa7.87□□□□□ -1.15
SS18-220ENST00000582092 DUS4LO95620 317 aaKnown RBP7.87□□□□□ -1.15
SS18-220ENST00000582092 OR2H2O95918 312 aa7.87□□□□□ -1.15
SS18-220ENST00000582092 HAND1O96004 215 aa7.87□□□□□ -1.15
SS18-220ENST00000582092 IFNA2P01563 188 aa7.87□□□□□ -1.15
SS18-220ENST00000582092 IFNA21P01568 189 aa7.87□□□□□ -1.15
SS18-220ENST00000582092 ZBTB25P24278 435 aa7.87□□□□□ -1.15
SS18-220ENST00000582092 ZNF81P51508 661 aa7.87□□□□□ -1.15
SS18-220ENST00000582092 CYCSP99999 105 aaKnown RBP7.87□□□□□ -1.15
SS18-220ENST00000582092 TLE4Q04727 773 aa7.87□□□□□ -1.15
SS18-220ENST00000582092 PPP1R1AQ13522 171 aa7.87□□□□□ -1.15
SS18-220ENST00000582092 DHRS11Q6UWP2 260 aa7.87□□□□□ -1.15
SS18-220ENST00000582092 MOB1BQ7L9L4 216 aa7.87□□□□□ -1.15
SS18-220ENST00000582092 ADAD2Q8NCV1 583 aaKnown RBP7.87□□□□□ -1.15
SS18-220ENST00000582092 RNASE6Q93091 150 aaKnown RBP7.87□□□□□ -1.15
SS18-220ENST00000582092 WDR13Q9H1Z4 485 aa7.87□□□□□ -1.15
SS18-220ENST00000582092 IFT22Q9H7X7 185 aa7.87□□□□□ -1.15
SS18-220ENST00000582092 Q9N2K0 584 aa7.87□□□□□ -1.15
SS18-220ENST00000582092 FBXO9Q9UK97 447 aaPredicted RBP7.87□□□□□ -1.15
SS18-220ENST00000582092 ZDHHC8Q9ULC8 765 aa7.87□□□□□ -1.15
SS18-220ENST00000582092 HSPB11Q9Y547 144 aa7.87□□□□□ -1.15
SS18-220ENST00000582092 RBM7Q9Y580 266 aaKnown RBP7.87□□□□□ -1.15
SS18-220ENST00000582092 HEATR1Q9H583 2144 aaKnown RBP7.87□□□□□ -1.15
SS18-220ENST00000582092 CENPEQ02224 2701 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms