RNA–Protein interactions for RNA: ENST00000581705.5

SNX11-209, Transcript of sorting nexin 11, humanhuman

TSL 2

Gene SNX11, Length 1,426 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-209ENST00000581705 DTYMKP23919 212 aa17.19■□□□□ 0.34
SNX11-209ENST00000581705 LMO1P25800 156 aa17.19■□□□□ 0.34
SNX11-209ENST00000581705 MRPS15P82914 257 aaKnown RBP17.19■□□□□ 0.34
SNX11-209ENST00000581705 MZT2BQ6NZ67 158 aa17.19■□□□□ 0.34
SNX11-209ENST00000581705 CHPT1Q8WUD6 406 aa17.19■□□□□ 0.34
SNX11-209ENST00000581705 RAB1BQ9H0U4 201 aa17.19■□□□□ 0.34
SNX11-209ENST00000581705 RIMS4Q9H426 269 aaPredicted RBP17.19■□□□□ 0.34
SNX11-209ENST00000581705 TMEM160Q9NX00 188 aa17.19■□□□□ 0.34
SNX11-209ENST00000581705 TREM2Q9NZC2 230 aa17.19■□□□□ 0.34
SNX11-209ENST00000581705 MCRIP1C9JLW8 97 aa17.18■□□□□ 0.34
SNX11-209ENST00000581705 NAT1P18440 290 aa17.18■□□□□ 0.34
SNX11-209ENST00000581705 FAUP35544 74 aaKnown RBP17.18■□□□□ 0.34
SNX11-209ENST00000581705 MDH2P40926 338 aaKnown RBP17.18■□□□□ 0.34
SNX11-209ENST00000581705 KCNJ3P48549 501 aa17.18■□□□□ 0.34
SNX11-209ENST00000581705 TAS2R19P59542 299 aa17.18■□□□□ 0.34
SNX11-209ENST00000581705 CCL8P80075 99 aa17.18■□□□□ 0.34
SNX11-209ENST00000581705 GUCA2AQ02747 115 aa17.18■□□□□ 0.34
SNX11-209ENST00000581705 SPRNQ5BIV9 151 aa17.18■□□□□ 0.34
SNX11-209ENST00000581705 ATAD3CQ5T2N8 411 aa17.18■□□□□ 0.34
SNX11-209ENST00000581705 TRAPPC6BQ86SZ2 158 aa17.18■□□□□ 0.34
SNX11-209ENST00000581705 TMEM229BQ8NBD8 167 aa17.18■□□□□ 0.34
SNX11-209ENST00000581705 SULT4A1Q9BR01 284 aa17.18■□□□□ 0.34
SNX11-209ENST00000581705 IL36RNQ9UBH0 155 aa17.18■□□□□ 0.34
SNX11-209ENST00000581705 CDC42EP3Q9UKI2 254 aa17.18■□□□□ 0.34
SNX11-209ENST00000581705 PLA2G10O15496 165 aa17.17■□□□□ 0.34
SNX11-209ENST00000581705 LYRM1O43325 122 aa17.17■□□□□ 0.34
SNX11-209ENST00000581705 SSX5O60225 188 aa17.17■□□□□ 0.34
SNX11-209ENST00000581705 FSTL3O95633 263 aa17.17■□□□□ 0.34
SNX11-209ENST00000581705 HAND1O96004 215 aa17.17■□□□□ 0.34
SNX11-209ENST00000581705 IFNA2P01563 188 aa17.17■□□□□ 0.34
SNX11-209ENST00000581705 GZMKP49863 264 aa17.17■□□□□ 0.34
SNX11-209ENST00000581705 MRPS11P82912 194 aaKnown RBP17.17■□□□□ 0.34
SNX11-209ENST00000581705 OXA1LQ15070 435 aa17.17■□□□□ 0.34
SNX11-209ENST00000581705 CARTPTQ16568 116 aa17.17■□□□□ 0.34
SNX11-209ENST00000581705 SRSF7Q16629 238 aaKnown RBP eCLIP17.17■□□□□ 0.34
SNX11-209ENST00000581705 RNASE12Q5GAN4 147 aaKnown RBP17.17■□□□□ 0.34
SNX11-209ENST00000581705 BATF2Q8N1L9 274 aa17.17■□□□□ 0.34
SNX11-209ENST00000581705 NUDCD2Q8WVJ2 157 aa17.17■□□□□ 0.34
SNX11-209ENST00000581705 NEU4Q8WWR8 484 aaPredicted RBP17.17■□□□□ 0.34
SNX11-209ENST00000581705 FAAP24Q9BTP7 215 aa17.17■□□□□ 0.34
SNX11-209ENST00000581705 IFT46Q9NQC8 304 aa17.17■□□□□ 0.34
SNX11-209ENST00000581705 NLKQ9UBE8 527 aa17.17■□□□□ 0.34
SNX11-209ENST00000581705 CACNG2Q9Y698 323 aa17.17■□□□□ 0.34
SNX11-209ENST00000581705 DYSFO75923 2080 aa17.16■□□□□ 0.34
SNX11-209ENST00000581705 STAB1Q9NY15 2570 aa17.16■□□□□ 0.34
SNX11-209ENST00000581705 TRAV24A0A0B4J272 114 aa17.16■□□□□ 0.34
SNX11-209ENST00000581705 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.16■□□□□ 0.34
SNX11-209ENST00000581705 ZNF44P15621 663 aa17.16■□□□□ 0.34
SNX11-209ENST00000581705 MUC1P15941 1255 aaPredicted RBP17.16■□□□□ 0.34
SNX11-209ENST00000581705 ZNF16P17020 682 aaPredicted RBP17.16■□□□□ 0.34
SNX11-209ENST00000581705 TEX36Q5VZQ5 186 aa17.16■□□□□ 0.34
SNX11-209ENST00000581705 OLFML2AQ68BL7 652 aa17.16■□□□□ 0.34
SNX11-209ENST00000581705 SUMF2Q8NBJ7 301 aa17.16■□□□□ 0.34
SNX11-209ENST00000581705 CMSS1Q9BQ75 279 aaKnown RBP17.16■□□□□ 0.34
SNX11-209ENST00000581705 DPCDQ9BVM2 203 aaPredicted RBP17.16■□□□□ 0.34
SNX11-209ENST00000581705 WDR13Q9H1Z4 485 aa17.16■□□□□ 0.34
SNX11-209ENST00000581705 C12orf4Q9NQ89 552 aa17.16■□□□□ 0.34
SNX11-209ENST00000581705 DNAJB11Q9UBS4 358 aa17.16■□□□□ 0.34
SNX11-209ENST00000581705 AK3Q9UIJ7 227 aa17.16■□□□□ 0.34
SNX11-209ENST00000581705 ELF5Q9UKW6 265 aaPredicted RBP17.16■□□□□ 0.34
SNX11-209ENST00000581705 TANC2Q9HCD6 1990 aa17.16■□□□□ 0.34
SNX11-209ENST00000581705 TRBV6-6A0A0A6YYG2 114 aa17.15■□□□□ 0.34
SNX11-209ENST00000581705 IGHV4-61A0A0C4DH41 118 aa17.15■□□□□ 0.34
SNX11-209ENST00000581705 WNT9BO14905 357 aa17.15■□□□□ 0.34
SNX11-209ENST00000581705 OR2H2O95918 312 aa17.15■□□□□ 0.34
SNX11-209ENST00000581705 FAM157CP0CG43 387 aa17.15■□□□□ 0.34
SNX11-209ENST00000581705 AKAIN1P0CW23 69 aa17.15■□□□□ 0.34
SNX11-209ENST00000581705 SNU13P55769 128 aaKnown RBP17.15■□□□□ 0.34
SNX11-209ENST00000581705 ACTBL2Q562R1 376 aa17.15■□□□□ 0.34
SNX11-209ENST00000581705 HOGA1Q86XE5 327 aa17.15■□□□□ 0.34
SNX11-209ENST00000581705 ZCCHC24Q8N2G6 241 aaKnown RBP17.15■□□□□ 0.34
SNX11-209ENST00000581705 SPATA3Q8NHX4 192 aa17.15■□□□□ 0.34
SNX11-209ENST00000581705 C11orf54Q9H0W9 315 aaPredicted RBP17.15■□□□□ 0.34
SNX11-209ENST00000581705 WIPI2Q9Y4P8 454 aa17.15■□□□□ 0.34
SNX11-209ENST00000581705 MALRD1Q5VYJ5 2156 aa17.15■□□□□ 0.34
SNX11-209ENST00000581705 SLC33A1O00400 549 aaPredicted RBP17.14■□□□□ 0.33
SNX11-209ENST00000581705 CD74P04233 296 aa17.14■□□□□ 0.33
SNX11-209ENST00000581705 DAOP14920 347 aa17.14■□□□□ 0.33
SNX11-209ENST00000581705 EGR1P18146 543 aa17.14■□□□□ 0.33
SNX11-209ENST00000581705 GIFP27352 417 aa17.14■□□□□ 0.33
SNX11-209ENST00000581705 DUSP1P28562 367 aa17.14■□□□□ 0.33
SNX11-209ENST00000581705 PAX5Q02548 391 aa17.14■□□□□ 0.33
SNX11-209ENST00000581705 TRIM16LQ309B1 348 aa17.14■□□□□ 0.33
SNX11-209ENST00000581705 PAN3Q58A45 887 aaKnown RBP17.14■□□□□ 0.33
SNX11-209ENST00000581705 Q6ZS49 121 aa17.14■□□□□ 0.33
SNX11-209ENST00000581705 PPP1R35Q8TAP8 253 aa17.14■□□□□ 0.33
SNX11-209ENST00000581705 BPESC1Q9GZL8 116 aa17.14■□□□□ 0.33
SNX11-209ENST00000581705 DNTTIP1Q9H147 329 aa17.14■□□□□ 0.33
SNX11-209ENST00000581705 TMEM106BQ9NUM4 274 aa17.14■□□□□ 0.33
SNX11-209ENST00000581705 IGHV1-69-2A0A0G2JMI3 117 aa17.13■□□□□ 0.33
SNX11-209ENST00000581705 OR2AT4A6NND4 320 aa17.13■□□□□ 0.33
SNX11-209ENST00000581705 ZNF736B4DX44 427 aaPredicted RBP17.13■□□□□ 0.33
SNX11-209ENST00000581705 TMEM178BH3BS89 294 aa17.13■□□□□ 0.33
SNX11-209ENST00000581705 PSG2P11465 335 aa17.13■□□□□ 0.33
SNX11-209ENST00000581705 MEF2DQ14814 521 aa17.13■□□□□ 0.33
SNX11-209ENST00000581705 MICBQ29980 383 aa17.13■□□□□ 0.33
SNX11-209ENST00000581705 GAPTQ8N292 157 aa17.13■□□□□ 0.33
SNX11-209ENST00000581705 MSI2Q96DH6 328 aaKnown RBP17.13■□□□□ 0.33
SNX11-209ENST00000581705 BEX2Q9BXY8 128 aa17.13■□□□□ 0.33
SNX11-209ENST00000581705 ZNF581Q9P0T4 197 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms