RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 HEATR1Q9H583 2144 aaKnown RBP10.83□□□□□ -0.68
CDK5RAP3-217ENST00000580287 SPTAN1Q13813 2472 aaKnown RBP10.83□□□□□ -0.68
CDK5RAP3-217ENST00000580287 NKX2-6A6NCS4 301 aa10.83□□□□□ -0.68
CDK5RAP3-217ENST00000580287 FAM90A27PA6NNH2 459 aa10.83□□□□□ -0.68
CDK5RAP3-217ENST00000580287 CD300LBA8K4G0 201 aa10.83□□□□□ -0.68
CDK5RAP3-217ENST00000580287 ADAP1O75689 374 aa10.83□□□□□ -0.68
CDK5RAP3-217ENST00000580287 MPV17P39210 176 aa10.83□□□□□ -0.68
CDK5RAP3-217ENST00000580287 ALDH3B1P43353 468 aa10.83□□□□□ -0.68
CDK5RAP3-217ENST00000580287 FABP6P51161 128 aa10.83□□□□□ -0.68
CDK5RAP3-217ENST00000580287 PPP1CBP62140 327 aa10.83□□□□□ -0.68
CDK5RAP3-217ENST00000580287 BRICD5Q6PL45 260 aa10.83□□□□□ -0.68
CDK5RAP3-217ENST00000580287 MRGPRGQ86SM5 289 aa10.83□□□□□ -0.68
CDK5RAP3-217ENST00000580287 VRK1Q99986 396 aaPredicted RBP10.83□□□□□ -0.68
CDK5RAP3-217ENST00000580287 ZNF471Q9BX82 626 aaPredicted RBP10.83□□□□□ -0.68
CDK5RAP3-217ENST00000580287 RGCCQ9H4X1 137 aa10.83□□□□□ -0.68
CDK5RAP3-217ENST00000580287 IFT22Q9H7X7 185 aa10.83□□□□□ -0.68
CDK5RAP3-217ENST00000580287 COMMD9Q9P000 198 aa10.83□□□□□ -0.68
CDK5RAP3-217ENST00000580287 IGHV2OR16-5A0A0B4J2B6 119 aa10.83□□□□□ -0.68
CDK5RAP3-217ENST00000580287 RNF222A6NCQ9 220 aa10.83□□□□□ -0.68
CDK5RAP3-217ENST00000580287 PRB1P04280 392 aa10.83□□□□□ -0.68
CDK5RAP3-217ENST00000580287 H2AFB1P0C5Y9 115 aa10.83□□□□□ -0.68
CDK5RAP3-217ENST00000580287 AKR1C2P52895 323 aa10.83□□□□□ -0.68
CDK5RAP3-217ENST00000580287 CASP6P55212 293 aa10.83□□□□□ -0.68
CDK5RAP3-217ENST00000580287 AKR1C1Q04828 323 aa10.83□□□□□ -0.68
CDK5RAP3-217ENST00000580287 PDCD1Q15116 288 aa10.83□□□□□ -0.68
CDK5RAP3-217ENST00000580287 TIMM23BQ5SRD1 257 aa10.83□□□□□ -0.68
CDK5RAP3-217ENST00000580287 CPNE2Q96FN4 548 aaPredicted RBP10.83□□□□□ -0.68
CDK5RAP3-217ENST00000580287 OCSTAMPQ9BR26 566 aa10.83□□□□□ -0.68
CDK5RAP3-217ENST00000580287 FAAP24Q9BTP7 215 aa10.83□□□□□ -0.68
CDK5RAP3-217ENST00000580287 NDRG3Q9UGV2 375 aa10.83□□□□□ -0.68
CDK5RAP3-217ENST00000580287 LRBAP50851 2863 aa10.82□□□□□ -0.68
CDK5RAP3-217ENST00000580287 C5orf51A6NDU8 294 aa10.82□□□□□ -0.68
CDK5RAP3-217ENST00000580287 DHRS7CA6NNS2 312 aa10.82□□□□□ -0.68
CDK5RAP3-217ENST00000580287 IGLV1-44P01699 117 aa10.82□□□□□ -0.68
CDK5RAP3-217ENST00000580287 SELEP16581 610 aa10.82□□□□□ -0.68
CDK5RAP3-217ENST00000580287 CA6P23280 308 aa10.82□□□□□ -0.68
CDK5RAP3-217ENST00000580287 MSMPQ1L6U9 139 aa10.82□□□□□ -0.68
CDK5RAP3-217ENST00000580287 HFEQ30201 348 aa10.82□□□□□ -0.68
CDK5RAP3-217ENST00000580287 ACTBL2Q562R1 376 aa10.82□□□□□ -0.68
CDK5RAP3-217ENST00000580287 VHLLQ6RSH7 139 aa10.82□□□□□ -0.68
CDK5RAP3-217ENST00000580287 HOGA1Q86XE5 327 aa10.82□□□□□ -0.68
CDK5RAP3-217ENST00000580287 C17orf78Q8N4C9 275 aa10.82□□□□□ -0.68
CDK5RAP3-217ENST00000580287 MUCL1Q96DR8 90 aa10.82□□□□□ -0.68
CDK5RAP3-217ENST00000580287 C12orf57Q99622 126 aa10.82□□□□□ -0.68
CDK5RAP3-217ENST00000580287 MYOZ1Q9NP98 299 aaPredicted RBP10.82□□□□□ -0.68
CDK5RAP3-217ENST00000580287 MBD2Q9UBB5 411 aa10.82□□□□□ -0.68
CDK5RAP3-217ENST00000580287 RALYQ9UKM9 306 aaKnown RBP10.82□□□□□ -0.68
CDK5RAP3-217ENST00000580287 FLNCQ14315 2725 aa10.82□□□□□ -0.68
CDK5RAP3-217ENST00000580287 ZNF816-ZNF321PA0A0X1KG74 233 aa10.82□□□□□ -0.68
CDK5RAP3-217ENST00000580287 SERPINE3A8MV23 424 aa10.82□□□□□ -0.68
CDK5RAP3-217ENST00000580287 C16orf97H3BN30 126 aa10.82□□□□□ -0.68
CDK5RAP3-217ENST00000580287 H7C2Y5 167 aa10.82□□□□□ -0.68
CDK5RAP3-217ENST00000580287 PF4V1P10720 104 aa10.82□□□□□ -0.68
CDK5RAP3-217ENST00000580287 HOXB1P14653 301 aaPredicted RBP10.82□□□□□ -0.68
CDK5RAP3-217ENST00000580287 ADORA2A-AS1P86434 159 aa10.82□□□□□ -0.68
CDK5RAP3-217ENST00000580287 PSG7Q13046 419 aa10.82□□□□□ -0.68
CDK5RAP3-217ENST00000580287 PRDX4Q13162 271 aa10.82□□□□□ -0.68
CDK5RAP3-217ENST00000580287 PIGYQ3MUY2 71 aa10.82□□□□□ -0.68
CDK5RAP3-217ENST00000580287 TMEM42Q69YG0 159 aa10.82□□□□□ -0.68
CDK5RAP3-217ENST00000580287 CALHM1Q8IU99 346 aa10.82□□□□□ -0.68
CDK5RAP3-217ENST00000580287 WFDC8Q8IUA0 241 aa10.82□□□□□ -0.68
CDK5RAP3-217ENST00000580287 ARRDC1Q8N5I2 433 aa10.82□□□□□ -0.68
CDK5RAP3-217ENST00000580287 TMEM185AQ8NFB2 350 aa10.82□□□□□ -0.68
CDK5RAP3-217ENST00000580287 BOD1Q96IK1 185 aa10.82□□□□□ -0.68
CDK5RAP3-217ENST00000580287 IGKV1D-8A0A087WSZ0 117 aa10.81□□□□□ -0.68
CDK5RAP3-217ENST00000580287 GPR31O00270 319 aa10.81□□□□□ -0.68
CDK5RAP3-217ENST00000580287 ATG12O94817 140 aa10.81□□□□□ -0.68
CDK5RAP3-217ENST00000580287 MPZP25189 248 aa10.81□□□□□ -0.68
CDK5RAP3-217ENST00000580287 GPM6AP51674 278 aa10.81□□□□□ -0.68
CDK5RAP3-217ENST00000580287 TAS2R46P59540 309 aa10.81□□□□□ -0.68
CDK5RAP3-217ENST00000580287 NAAAQ02083 359 aa10.81□□□□□ -0.68
CDK5RAP3-217ENST00000580287 VAX1Q5SQQ9 334 aa10.81□□□□□ -0.68
CDK5RAP3-217ENST00000580287 C11orf87Q6NUJ2 197 aa10.81□□□□□ -0.68
CDK5RAP3-217ENST00000580287 TMEM88Q6PEY1 159 aa10.81□□□□□ -0.68
CDK5RAP3-217ENST00000580287 OR13G1Q8NGZ3 307 aa10.81□□□□□ -0.68
CDK5RAP3-217ENST00000580287 OR51F2Q8NH61 342 aa10.81□□□□□ -0.68
CDK5RAP3-217ENST00000580287 KLF14Q8TD94 323 aaPredicted RBP10.81□□□□□ -0.68
CDK5RAP3-217ENST00000580287 HPSE2Q8WWQ2 592 aa10.81□□□□□ -0.68
CDK5RAP3-217ENST00000580287 ASB13Q8WXK3 278 aa10.81□□□□□ -0.68
CDK5RAP3-217ENST00000580287 DYRK2Q92630 601 aa10.81□□□□□ -0.68
CDK5RAP3-217ENST00000580287 Q96M66 194 aa10.81□□□□□ -0.68
CDK5RAP3-217ENST00000580287 TM2D1Q9BX74 207 aa10.81□□□□□ -0.68
CDK5RAP3-217ENST00000580287 PIGMQ9H3S5 423 aa10.81□□□□□ -0.68
CDK5RAP3-217ENST00000580287 JKAMPQ9P055 326 aa10.81□□□□□ -0.68
CDK5RAP3-217ENST00000580287 MLXQ9UH92 298 aa10.81□□□□□ -0.68
CDK5RAP3-217ENST00000580287 ZNF391Q9UJN7 358 aa10.81□□□□□ -0.68
CDK5RAP3-217ENST00000580287 PLCE1Q9P212 2302 aa10.81□□□□□ -0.68
CDK5RAP3-217ENST00000580287 A0A0D9SG52 128 aa10.81□□□□□ -0.68
CDK5RAP3-217ENST00000580287 GEMIN2O14893 280 aaKnown RBP10.81□□□□□ -0.68
CDK5RAP3-217ENST00000580287 GOSR1O95249 250 aa10.81□□□□□ -0.68
CDK5RAP3-217ENST00000580287 SERPINF1P36955 418 aa10.81□□□□□ -0.68
CDK5RAP3-217ENST00000580287 TMEM200AQ86VY9 491 aa10.81□□□□□ -0.68
CDK5RAP3-217ENST00000580287 LRP11Q86VZ4 500 aa10.81□□□□□ -0.68
CDK5RAP3-217ENST00000580287 FBXL14Q8N1E6 418 aa10.81□□□□□ -0.68
CDK5RAP3-217ENST00000580287 KCNRGQ8N5I3 272 aa10.81□□□□□ -0.68
CDK5RAP3-217ENST00000580287 MITD1Q8WV92 249 aa10.81□□□□□ -0.68
CDK5RAP3-217ENST00000580287 C5orf66Q9H5L9 145 aa10.81□□□□□ -0.68
CDK5RAP3-217ENST00000580287 ESRP2Q9H6T0 727 aaKnown RBP10.81□□□□□ -0.68
CDK5RAP3-217ENST00000580287 KNG1P01042 644 aa10.8□□□□□ -0.68
CDK5RAP3-217ENST00000580287 THBDP07204 575 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms