RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 AWAT2Q6E213 333 aa11.77□□□□□ -0.53
MKS1-207ENST00000578789 C16orf87Q6PH81 154 aa11.77□□□□□ -0.53
MKS1-207ENST00000578789 GLIPR1L1Q6UWM5 242 aa11.77□□□□□ -0.53
MKS1-207ENST00000578789 CEACAM19Q7Z692 300 aa11.77□□□□□ -0.53
MKS1-207ENST00000578789 OR4D6Q8NGJ1 314 aa11.77□□□□□ -0.53
MKS1-207ENST00000578789 MRPS24Q96EL2 167 aaKnown RBP11.77□□□□□ -0.53
MKS1-207ENST00000578789 AJUBAQ96IF1 538 aa11.77□□□□□ -0.53
MKS1-207ENST00000578789 YTHDF1Q9BYJ9 559 aaKnown RBP11.77□□□□□ -0.53
MKS1-207ENST00000578789 PPIL3Q9H2H8 161 aaKnown RBP11.77□□□□□ -0.53
MKS1-207ENST00000578789 TCF7L1Q9HCS4 588 aa11.77□□□□□ -0.53
MKS1-207ENST00000578789 SESN1Q9Y6P5 492 aa11.77□□□□□ -0.53
MKS1-207ENST00000578789 IGHV4-59P01825 116 aa11.76□□□□□ -0.53
MKS1-207ENST00000578789 CD37P11049 281 aa11.76□□□□□ -0.53
MKS1-207ENST00000578789 COX7A1P24310 79 aa11.76□□□□□ -0.53
MKS1-207ENST00000578789 GABRA5P31644 462 aa11.76□□□□□ -0.53
MKS1-207ENST00000578789 RSBN1Q5VWQ0 802 aaPredicted RBP11.76□□□□□ -0.53
MKS1-207ENST00000578789 ZNF626Q68DY1 528 aa11.76□□□□□ -0.53
MKS1-207ENST00000578789 TMEM91Q6ZNR0 172 aa11.76□□□□□ -0.53
MKS1-207ENST00000578789 TRAPPC6BQ86SZ2 158 aa11.76□□□□□ -0.53
MKS1-207ENST00000578789 BEND2Q8NDZ0 799 aa11.76□□□□□ -0.53
MKS1-207ENST00000578789 OR11H6Q8NGC7 330 aa11.76□□□□□ -0.53
MKS1-207ENST00000578789 OR13D1Q8NGV5 346 aa11.76□□□□□ -0.53
MKS1-207ENST00000578789 C17orf50Q8WW18 174 aa11.76□□□□□ -0.53
MKS1-207ENST00000578789 GCDHQ92947 438 aaPredicted RBP11.76□□□□□ -0.53
MKS1-207ENST00000578789 TMEM203Q969S6 136 aa11.76□□□□□ -0.53
MKS1-207ENST00000578789 FOXRED1Q96CU9 486 aaPredicted RBP11.76□□□□□ -0.53
MKS1-207ENST00000578789 KRTAP3-3Q9BYR6 98 aa11.76□□□□□ -0.53
MKS1-207ENST00000578789 KRTAP3-2Q9BYR7 98 aa11.76□□□□□ -0.53
MKS1-207ENST00000578789 CHIAQ9BZP6 476 aa11.76□□□□□ -0.53
MKS1-207ENST00000578789 GAL3ST2Q9H3Q3 398 aa11.76□□□□□ -0.53
MKS1-207ENST00000578789 ZNF581Q9P0T4 197 aa11.76□□□□□ -0.53
MKS1-207ENST00000578789 GHRLQ9UBU3 117 aa11.76□□□□□ -0.53
MKS1-207ENST00000578789 ANK2Q01484 3957 aa11.75□□□□□ -0.53
MKS1-207ENST00000578789 ZNF729A6NN14 1252 aaPredicted RBP11.75□□□□□ -0.53
MKS1-207ENST00000578789 HSPB6O14558 160 aa11.75□□□□□ -0.53
MKS1-207ENST00000578789 GEMIN2O14893 280 aaKnown RBP11.75□□□□□ -0.53
MKS1-207ENST00000578789 OR7C1O76099 320 aaPredicted RBP11.75□□□□□ -0.53
MKS1-207ENST00000578789 PAHP00439 452 aa11.75□□□□□ -0.53
MKS1-207ENST00000578789 SRMP19623 302 aa11.75□□□□□ -0.53
MKS1-207ENST00000578789 RPL15P61313 204 aaKnown RBP11.75□□□□□ -0.53
MKS1-207ENST00000578789 EMX1Q04741 257 aaPredicted RBP11.75□□□□□ -0.53
MKS1-207ENST00000578789 SSX1Q16384 188 aa11.75□□□□□ -0.53
MKS1-207ENST00000578789 C1orf100Q5SVJ3 147 aa11.75□□□□□ -0.53
MKS1-207ENST00000578789 GLT8D1Q68CQ7 371 aa11.75□□□□□ -0.53
MKS1-207ENST00000578789 HEPN1Q6WQI6 88 aa11.75□□□□□ -0.53
MKS1-207ENST00000578789 SVOPQ8N4V2 548 aa11.75□□□□□ -0.53
MKS1-207ENST00000578789 SUMF2Q8NBJ7 301 aa11.75□□□□□ -0.53
MKS1-207ENST00000578789 PLPPR1Q8TBJ4 325 aa11.75□□□□□ -0.53
MKS1-207ENST00000578789 DPCDQ9BVM2 203 aaPredicted RBP11.75□□□□□ -0.53
MKS1-207ENST00000578789 DPAGT1Q9H3H5 408 aa11.75□□□□□ -0.53
MKS1-207ENST00000578789 OR6C3Q9NZP0 311 aa11.75□□□□□ -0.53
MKS1-207ENST00000578789 RCC2Q9P258 522 aaKnown RBP11.75□□□□□ -0.53
MKS1-207ENST00000578789 TBL2Q9Y4P3 447 aaKnown RBP11.75□□□□□ -0.53
MKS1-207ENST00000578789 KIAA2026Q5HYC2 2103 aa11.74□□□□□ -0.53
MKS1-207ENST00000578789 IGHV2-26A0A0B4J1V2 119 aa11.74□□□□□ -0.53
MKS1-207ENST00000578789 FAM90A10PA6NDY2 464 aa11.74□□□□□ -0.53
MKS1-207ENST00000578789 FAM90A18PA6NE21 464 aa11.74□□□□□ -0.53
MKS1-207ENST00000578789 FAM90A16PA6NEW6 464 aa11.74□□□□□ -0.53
MKS1-207ENST00000578789 FAM90A20PA6NIJ5 464 aa11.74□□□□□ -0.53
MKS1-207ENST00000578789 FAM90A8PA6NJQ4 464 aa11.74□□□□□ -0.53
MKS1-207ENST00000578789 FAM90A7PA6NKC0 464 aa11.74□□□□□ -0.53
MKS1-207ENST00000578789 FAM90A22PA8MWA6 464 aa11.74□□□□□ -0.53
MKS1-207ENST00000578789 FAM90A12PA8MX19 464 aa11.74□□□□□ -0.53
MKS1-207ENST00000578789 FAM90A5PA8MXJ8 464 aa11.74□□□□□ -0.53
MKS1-207ENST00000578789 FAM90A23PA8MXZ1 464 aa11.74□□□□□ -0.53
MKS1-207ENST00000578789 MMP23AO75900 390 aa11.74□□□□□ -0.53
MKS1-207ENST00000578789 ARL6IP5O75915 188 aa11.74□□□□□ -0.53
MKS1-207ENST00000578789 FAM90A15PP0C7V4 464 aa11.74□□□□□ -0.53
MKS1-207ENST00000578789 FAM90A13PP0C7W8 464 aa11.74□□□□□ -0.53
MKS1-207ENST00000578789 FAM90A14PP0C7W9 464 aa11.74□□□□□ -0.53
MKS1-207ENST00000578789 FAM90A24PP0C7X0 464 aa11.74□□□□□ -0.53
MKS1-207ENST00000578789 UBBP0CG47 229 aa11.74□□□□□ -0.53
MKS1-207ENST00000578789 CGB3P0DN86 165 aa11.74□□□□□ -0.53
MKS1-207ENST00000578789 CGB7P0DN87 165 aa11.74□□□□□ -0.53
MKS1-207ENST00000578789 FABP5Q01469 135 aa11.74□□□□□ -0.53
MKS1-207ENST00000578789 FOXL1Q12952 345 aa11.74□□□□□ -0.53
MKS1-207ENST00000578789 TAF9Q16594 264 aa11.74□□□□□ -0.53
MKS1-207ENST00000578789 AANATQ16613 207 aa11.74□□□□□ -0.53
MKS1-207ENST00000578789 AWAT1Q58HT5 328 aa11.74□□□□□ -0.53
MKS1-207ENST00000578789 UBE2UQ5VVX9 321 aa11.74□□□□□ -0.53
MKS1-207ENST00000578789 C12orf54Q6X4T0 127 aa11.74□□□□□ -0.53
MKS1-207ENST00000578789 TMEM104Q8NE00 496 aa11.74□□□□□ -0.53
MKS1-207ENST00000578789 OR5R1Q8NH85 324 aa11.74□□□□□ -0.53
MKS1-207ENST00000578789 DYRK2Q92630 601 aa11.74□□□□□ -0.53
MKS1-207ENST00000578789 BARHL1Q9BZE3 327 aa11.74□□□□□ -0.53
MKS1-207ENST00000578789 SLITRK2Q9H156 845 aa11.74□□□□□ -0.53
MKS1-207ENST00000578789 MEGF9Q9H1U4 602 aa11.74□□□□□ -0.53
MKS1-207ENST00000578789 TMEM133Q9H2Q1 129 aa11.74□□□□□ -0.53
MKS1-207ENST00000578789 SPACA1Q9HBV2 294 aa11.74□□□□□ -0.53
MKS1-207ENST00000578789 NDUFB11Q9NX14 153 aa11.74□□□□□ -0.53
MKS1-207ENST00000578789 KIF25Q9UIL4 384 aa11.74□□□□□ -0.53
MKS1-207ENST00000578789 FAM181BA6NEQ2 426 aa11.73□□□□□ -0.53
MKS1-207ENST00000578789 ARG1P05089 322 aa11.73□□□□□ -0.53
MKS1-207ENST00000578789 MGMTP16455 207 aa11.73□□□□□ -0.53
MKS1-207ENST00000578789 CD34P28906 385 aa11.73□□□□□ -0.53
MKS1-207ENST00000578789 GLP1RP43220 463 aa11.73□□□□□ -0.53
MKS1-207ENST00000578789 LGALS4P56470 323 aa11.73□□□□□ -0.53
MKS1-207ENST00000578789 C17orf58Q2M2W7 97 aa11.73□□□□□ -0.53
MKS1-207ENST00000578789 PRAMEF5Q5TYX0 476 aa11.73□□□□□ -0.53
MKS1-207ENST00000578789 SLC35E4Q6ICL7 350 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms