RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 LILRA1O75019 489 aa9.45□□□□□ -0.9
SKA2-204ENST00000578519 PPYP01298 95 aa9.45□□□□□ -0.9
SKA2-204ENST00000578519 PIGPP57054 158 aa9.45□□□□□ -0.9
SKA2-204ENST00000578519 FXYD4P59646 89 aa9.45□□□□□ -0.9
SKA2-204ENST00000578519 RND3P61587 244 aa9.45□□□□□ -0.9
SKA2-204ENST00000578519 EIF5AP63241 154 aaKnown RBP9.45□□□□□ -0.9
SKA2-204ENST00000578519 HLA-DRB3P79483 266 aa9.45□□□□□ -0.9
SKA2-204ENST00000578519 BAMBIQ13145 260 aa9.45□□□□□ -0.9
SKA2-204ENST00000578519 ZNF345Q14585 488 aa9.45□□□□□ -0.9
SKA2-204ENST00000578519 C2orf68Q2NKX9 166 aa9.45□□□□□ -0.9
SKA2-204ENST00000578519 LY6G6FQ5SQ64 297 aa9.45□□□□□ -0.9
SKA2-204ENST00000578519 Q6P435 159 aa9.45□□□□□ -0.9
SKA2-204ENST00000578519 ZNF880Q6PDB4 577 aa9.45□□□□□ -0.9
SKA2-204ENST00000578519 ACOT7LQ6ZUV0 252 aa9.45□□□□□ -0.9
SKA2-204ENST00000578519 TMUB2Q71RG4 321 aa9.45□□□□□ -0.9
SKA2-204ENST00000578519 SLC51BQ86UW2 128 aa9.45□□□□□ -0.9
SKA2-204ENST00000578519 Q8NA96 180 aa9.45□□□□□ -0.9
SKA2-204ENST00000578519 RTN4IP1Q8WWV3 396 aaPredicted RBP9.45□□□□□ -0.9
SKA2-204ENST00000578519 RDH5Q92781 318 aa9.45□□□□□ -0.9
SKA2-204ENST00000578519 ERGIC1Q969X5 290 aa9.45□□□□□ -0.9
SKA2-204ENST00000578519 TMEM230Q96A57 120 aa9.45□□□□□ -0.9
SKA2-204ENST00000578519 ARL6Q9H0F7 186 aa9.45□□□□□ -0.9
SKA2-204ENST00000578519 FN3KRPQ9HA64 309 aa9.45□□□□□ -0.9
SKA2-204ENST00000578519 DUSP13Q9UII6 198 aa9.45□□□□□ -0.9
SKA2-204ENST00000578519 TRAV24A0A0B4J272 114 aa9.44□□□□□ -0.9
SKA2-204ENST00000578519 A0A0G2JNJ9 132 aa9.44□□□□□ -0.9
SKA2-204ENST00000578519 DUXBA0A1W2PPF3 345 aa9.44□□□□□ -0.9
SKA2-204ENST00000578519 hCG_1807616A0A1W2PRN6 198 aa9.44□□□□□ -0.9
SKA2-204ENST00000578519 BET1O15155 118 aa9.44□□□□□ -0.9
SKA2-204ENST00000578519 RHBDL1O75783 438 aa9.44□□□□□ -0.9
SKA2-204ENST00000578519 OR2H2O95918 312 aa9.44□□□□□ -0.9
SKA2-204ENST00000578519 HAND1O96004 215 aa9.44□□□□□ -0.9
SKA2-204ENST00000578519 AADACP22760 399 aa9.44□□□□□ -0.9
SKA2-204ENST00000578519 LMO1P25800 156 aa9.44□□□□□ -0.9
SKA2-204ENST00000578519 DUSP1P28562 367 aa9.44□□□□□ -0.9
SKA2-204ENST00000578519 CFHR2P36980 270 aa9.44□□□□□ -0.9
SKA2-204ENST00000578519 AP2S1P53680 142 aaPredicted RBP9.44□□□□□ -0.9
SKA2-204ENST00000578519 UBA52P62987 128 aaKnown RBP9.44□□□□□ -0.9
SKA2-204ENST00000578519 Q5BKY6 102 aa9.44□□□□□ -0.9
SKA2-204ENST00000578519 C6orf183Q5T699 404 aa9.44□□□□□ -0.9
SKA2-204ENST00000578519 DCAF12L2Q5VW00 463 aa9.44□□□□□ -0.9
SKA2-204ENST00000578519 SLC35E4Q6ICL7 350 aa9.44□□□□□ -0.9
SKA2-204ENST00000578519 ALKBH2Q6NS38 261 aa9.44□□□□□ -0.9
SKA2-204ENST00000578519 BATF2Q8N1L9 274 aa9.44□□□□□ -0.9
SKA2-204ENST00000578519 LRTM2Q8N967 370 aa9.44□□□□□ -0.9
SKA2-204ENST00000578519 ZNF680Q8NEM1 530 aa9.44□□□□□ -0.9
SKA2-204ENST00000578519 NUP37Q8NFH4 326 aa9.44□□□□□ -0.9
SKA2-204ENST00000578519 LILRB4Q8NHJ6 448 aa9.44□□□□□ -0.9
SKA2-204ENST00000578519 MRPL30Q8TCC3 161 aaKnown RBP9.44□□□□□ -0.9
SKA2-204ENST00000578519 PPP1R1CQ8WVI7 109 aa9.44□□□□□ -0.9
SKA2-204ENST00000578519 WDR89Q96FK6 387 aaPredicted RBP9.44□□□□□ -0.9
SKA2-204ENST00000578519 SEC22AQ96IW7 307 aa9.44□□□□□ -0.9
SKA2-204ENST00000578519 AKR1E2Q96JD6 320 aa9.44□□□□□ -0.9
SKA2-204ENST00000578519 ZNF488Q96MN9 340 aa9.44□□□□□ -0.9
SKA2-204ENST00000578519 SPIN2AQ99865 258 aa9.44□□□□□ -0.9
SKA2-204ENST00000578519 SPIN2BQ9BPZ2 258 aa9.44□□□□□ -0.9
SKA2-204ENST00000578519 TMEM165Q9HC07 324 aa9.44□□□□□ -0.9
SKA2-204ENST00000578519 HES4Q9HCC6 221 aa9.44□□□□□ -0.9
SKA2-204ENST00000578519 Q9UFV3 132 aa9.44□□□□□ -0.9
SKA2-204ENST00000578519 ZDHHC8Q9ULC8 765 aa9.44□□□□□ -0.9
SKA2-204ENST00000578519 MED12LQ86YW9 2145 aa9.44□□□□□ -0.9
SKA2-204ENST00000578519 NPIPB11E5RHQ5 1161 aa9.43□□□□□ -0.9
SKA2-204ENST00000578519 F8VVB4 439 aa9.43□□□□□ -0.9
SKA2-204ENST00000578519 F8VWA3 439 aa9.43□□□□□ -0.9
SKA2-204ENST00000578519 H0YL77 283 aa9.43□□□□□ -0.9
SKA2-204ENST00000578519 SIRPB1O00241 398 aa9.43□□□□□ -0.9
SKA2-204ENST00000578519 SLC33A1O00400 549 aaPredicted RBP9.43□□□□□ -0.9
SKA2-204ENST00000578519 MPC2O95563 127 aa9.43□□□□□ -0.9
SKA2-204ENST00000578519 PI3P19957 117 aa9.43□□□□□ -0.9
SKA2-204ENST00000578519 CD40P25942 277 aa9.43□□□□□ -0.9
SKA2-204ENST00000578519 ALKBH6Q3KRA9 238 aa9.43□□□□□ -0.9
SKA2-204ENST00000578519 ACP7Q6ZNF0 438 aa9.43□□□□□ -0.9
SKA2-204ENST00000578519 ZNF497Q6ZNH5 498 aa9.43□□□□□ -0.9
SKA2-204ENST00000578519 LIAT1Q6ZQX7 453 aa9.43□□□□□ -0.9
SKA2-204ENST00000578519 KCNRGQ8N5I3 272 aa9.43□□□□□ -0.9
SKA2-204ENST00000578519 OR2Z1Q8NG97 314 aa9.43□□□□□ -0.9
SKA2-204ENST00000578519 OR11L1Q8NGX0 322 aa9.43□□□□□ -0.9
SKA2-204ENST00000578519 DYRK2Q92630 601 aa9.43□□□□□ -0.9
SKA2-204ENST00000578519 CABLES2Q9BTV7 478 aa9.43□□□□□ -0.9
SKA2-204ENST00000578519 SLC5A7Q9GZV3 580 aa9.43□□□□□ -0.9
SKA2-204ENST00000578519 SLC2A9Q9NRM0 540 aa9.43□□□□□ -0.9
SKA2-204ENST00000578519 ASF1BQ9NVP2 202 aa9.43□□□□□ -0.9
SKA2-204ENST00000578519 JKAMPQ9P055 326 aa9.43□□□□□ -0.9
SKA2-204ENST00000578519 DNAJB11Q9UBS4 358 aa9.43□□□□□ -0.9
SKA2-204ENST00000578519 RAXQ9Y2V3 346 aa9.43□□□□□ -0.9
SKA2-204ENST00000578519 UBE2J1Q9Y385 318 aaPredicted RBP9.43□□□□□ -0.9
SKA2-204ENST00000578519 TMED3Q9Y3Q3 217 aa9.43□□□□□ -0.9
SKA2-204ENST00000578519 WIPI2Q9Y4P8 454 aa9.43□□□□□ -0.9
SKA2-204ENST00000578519 RBM7Q9Y580 266 aaKnown RBP9.43□□□□□ -0.9
SKA2-204ENST00000578519 FREM1Q5H8C1 2179 aa9.42□□□□□ -0.9
SKA2-204ENST00000578519 IGLV3-9A0A075B6K5 115 aa9.42□□□□□ -0.9
SKA2-204ENST00000578519 LOC100996750A0A140TA64 210 aa9.42□□□□□ -0.9
SKA2-204ENST00000578519 OOEPA6NGQ2 149 aa9.42□□□□□ -0.9
SKA2-204ENST00000578519 RNF212BA8MTL3 300 aa9.42□□□□□ -0.9
SKA2-204ENST00000578519 G3V3Q6 166 aa9.42□□□□□ -0.9
SKA2-204ENST00000578519 HSPB6O14558 160 aa9.42□□□□□ -0.9
SKA2-204ENST00000578519 CCSO14618 274 aa9.42□□□□□ -0.9
SKA2-204ENST00000578519 MPPED1O15442 326 aa9.42□□□□□ -0.9
SKA2-204ENST00000578519 MLNRO43193 412 aa9.42□□□□□ -0.9
SKA2-204ENST00000578519 HSPA12AO43301 675 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms