RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 PMS2P1A4D2B8 440 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 SYNGR3O43761 229 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 NXPH3O95157 252 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 SNAPINO95295 136 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 TSPAN15O95858 294 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 FCGR3AP08637 254 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 CST2P09228 141 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 HKR1P10072 659 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 MUC1P15941 1255 aaPredicted RBP4.61□□□□□ -1.67
VAPA-203ENST00000577539 OTX1P32242 354 aaPredicted RBP4.61□□□□□ -1.67
VAPA-203ENST00000577539 NPBWR1P48145 328 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 CAMLGP49069 296 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 CAV2P51636 162 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 PLGLB1Q02325 96 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 SURF2Q15527 256 aaPredicted RBP4.61□□□□□ -1.67
VAPA-203ENST00000577539 SLC25A24Q6NUK1 477 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 MRPL21Q7Z2W9 205 aaKnown RBP4.61□□□□□ -1.67
VAPA-203ENST00000577539 C5orf24Q7Z6I8 188 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 ZNF611Q8N823 705 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 ZNF565Q8N9K5 539 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 OR4A4PQ8NGN8 299 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 CPT1CQ8TCG5 803 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 KCNE4Q8WWG9 221 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 ZCCHC14Q8WYQ9 949 aaKnown RBP4.61□□□□□ -1.67
VAPA-203ENST00000577539 MARS2Q96GW9 593 aaKnown RBP4.61□□□□□ -1.67
VAPA-203ENST00000577539 CDX2Q99626 313 aaPredicted RBP4.61□□□□□ -1.67
VAPA-203ENST00000577539 SF3B5Q9BWJ5 86 aaKnown RBP4.61□□□□□ -1.67
VAPA-203ENST00000577539 OR2H1Q9GZK4 316 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 NAA60Q9H7X0 242 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 ANAPC10Q9UM13 185 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 LOXL2Q9Y4K0 774 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 SVILO95425 2214 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 BORCS7-ASMTA0A0B4J1R7 106 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 IGKV1-12A0A0C4DH73 117 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 FAM90A18PA6NE21 464 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 FAM90A16PA6NEW6 464 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 OR6C6A6NF89 314 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 FAM90A9PA6NNJ1 464 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 FAM90A5PA8MXJ8 464 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 NUDT19A8MXV4 375 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 RNASEK-C17orf49H0YIS7 233 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 YKT6O15498 198 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 FGF16O43320 207 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 IGKV1D-12P01611 117 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 FAM90A15PP0C7V4 464 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 FAM90A14PP0C7W9 464 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 ICAM2P13598 275 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 CRYGSP22914 178 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 NFYBP25208 207 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 CHATP28329 748 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 TAGLN2P37802 199 aaKnown RBP4.61□□□□□ -1.67
VAPA-203ENST00000577539 NPBWR2P48146 333 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 CEBPGP53567 150 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 PTTG1IPP53801 180 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 PDZK1IP1Q13113 114 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 CLINT1Q14677 625 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 ABHD17BQ5VST6 288 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 SLC23A3Q6PIS1 610 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 CRIP3Q6Q6R5 217 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 DBX2Q6ZNG2 339 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 PPP1R32Q7Z5V6 425 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 VASH2Q86V25 355 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 MCEMP1Q8IX19 187 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 ZFP82Q8N141 532 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 OR56B2PQ8NGI1 322 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 RNASE11Q8TAA1 199 aaKnown RBP4.61□□□□□ -1.67
VAPA-203ENST00000577539 SSC4DQ8WTU2 575 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 CT55Q8WUE5 264 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 ERGIC1Q969X5 290 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 MISP3Q96FF7 219 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 HIST1H2AAQ96QV6 131 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 EIF5A2Q9GZV4 153 aaKnown RBP4.61□□□□□ -1.67
VAPA-203ENST00000577539 LIME1Q9H400 295 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 GPR35Q9HC97 309 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 SLC2A9Q9NRM0 540 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 PLA2G3Q9NZ20 509 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 ZNF816-ZNF321PA0A0X1KG74 233 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 hCG_1809904A0A1W2PP81 198 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 A0A1W2PPE2 198 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 A0A1W2PR64 198 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 C5orf49A4QMS7 147 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 CRYM-AS1A6NIL9 109 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 CEACAM18A8MTB9 384 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 ZNF587BE7ETH6 402 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 M0R036 132 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 TAAR5O14804 337 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 PDCD6O75340 191 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 JTBO76095 146 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 CST4P01036 141 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 CTRB1P17538 263 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 PRKACAP17612 351 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 ADCYAP1P18509 176 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 AADACP22760 399 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 IL32P24001 234 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 GNRHRP30968 328 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 ALDH3B1P43353 468 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 HAAOP46952 286 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 NOVA1P51513 510 aaKnown RBP4.6□□□□□ -1.67
VAPA-203ENST00000577539 FUT6P51993 359 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 FAM3AP98173 230 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms