RNA–Protein interactions for RNA: ENST00000577300.1

SMCHD1-202, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 506 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-202ENST00000577300 BDKRB1P46663 353 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 RAB5CP51148 216 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 TMBIM6P55061 237 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 AQP4P55087 323 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 TAS2R43P59537 309 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 OR2B8PP59922 312 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 UBE2MP61081 183 aaKnown RBP2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 RPS6P62753 249 aaKnown RBP2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 GNG3P63215 75 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 PLCXD2Q0VAA5 305 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 MAD2L1BPQ15013 274 aaPredicted RBP2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 GGTA1PQ4G0N0 100 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 FAM78BQ5VT40 261 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 STEAP4Q687X5 459 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 TMEM225Q6GV28 225 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 FAM71E1Q6IPT2 247 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 CD200R1LQ6Q8B3 271 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 MBOAT2Q6ZWT7 520 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 GLT6D1Q7Z4J2 308 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 DEFB128Q7Z7B8 93 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 SLC30A8Q8IWU4 369 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 PDZD9Q8IXQ8 264 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 C8orf59Q8N0T1 100 aaPredicted RBP2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 ZNF664Q8N3J9 261 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 ZNF676Q8N7Q3 588 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 UBAC2Q8NBM4 344 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 INO80EQ8NBZ0 244 aaPredicted RBP2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 OR56A4Q8NGH8 313 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 OR8D4Q8NGM9 314 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 OR2G2Q8NGZ5 317 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 FAM45AQ8TCE6 357 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 SLC7A13Q8TCU3 470 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 RAB8BQ92930 207 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 PTX4Q96A99 478 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 ISOC2Q96AB3 205 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 TADA1Q96BN2 335 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 C8orf44Q96CB5 159 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 C10orf35Q96D05 121 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 CMBLQ96DG6 245 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 MRPS24Q96EL2 167 aaKnown RBP2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 PELI1Q96FA3 418 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 MRAP2Q96G30 205 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 BTN2A3PQ96KV6 586 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 JSRP1Q96MG2 331 aaPredicted RBP2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 Q96MT0 163 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 OR7D2Q96RA2 312 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 MICU1Q9BPX6 476 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 C20orf144Q9BQM9 153 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 RIOK2Q9BVS4 552 aaKnown RBP2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 NXF5Q9H1B4 397 aaKnown RBP2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 ABCG5Q9H222 651 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 SYT4Q9H2B2 425 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 SRMSQ9H3Y6 488 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 Q9H521 79 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 FAM124BQ9H5Z6 455 aaPredicted RBP2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 ZNF385DQ9H6B1 395 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 CLMPQ9H6B4 373 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 CXorf21Q9HAI6 301 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 SLCO1B3Q9NPD5 702 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 TMEM38BQ9NVV0 291 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 SPRR3Q9UBC9 169 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 RAB22AQ9UL26 194 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 TNFSF18Q9UNG2 199 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 RNF6Q9Y252 685 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 SIGLEC9Q9Y336 463 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 SCN2AQ99250 2005 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 THSD7BQ9C0I4 1608 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 OVOS2A0A0J9YW53 1432 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 C9orf84Q5VXU9 1444 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 OVOS2Q6IE36 1432 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 TRAPPC8Q9Y2L5 1435 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 ABCB11O95342 1321 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 PTPRJQ12913 1337 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 METP08581 1390 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 DICER1Q9UPY3 1922 aaKnown RBP2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 TRAV8-7A0A075B6U6 113 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 IGHV2-70DA0A0C4DH43 119 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 LOC100130705A0A1B0GUX0 176 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 TINCRA0A1B0GVN0 87 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 EFCAB9A8MZ26 197 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 RPL36A-HNRNPH2H7BZ11 118 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 FAAHO00519 579 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 PLPP3O14495 311 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 PDCD5O14737 125 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 SLC31A1O15431 190 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 ORC5O43913 435 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 EDF1O60869 148 aaKnown RBP2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 RDH16O75452 317 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 LRATO95237 230 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 FARS2O95363 451 aaKnown RBP2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 HPRT1P00492 218 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 OXTP01178 125 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 IGHV3-48P01763 117 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 APODP05090 189 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 MPC1LP0DKB6 136 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 C8orf88P0DMB2 117 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 OR5H8P0DN80 308 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 ESDP10768 282 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 HLA-EP13747 358 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 IGLL1P15814 213 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms