RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 LCN1P1Q5VSP4 162 aa4.6□□□□□ -1.67
SMG6-219ENST00000575663 PLCXD3Q63HM9 321 aa4.6□□□□□ -1.67
SMG6-219ENST00000575663 RPL13AP3Q6NVV1 102 aa4.6□□□□□ -1.67
SMG6-219ENST00000575663 WDR73Q6P4I2 378 aa4.6□□□□□ -1.67
SMG6-219ENST00000575663 LYPD4Q6UWN0 246 aa4.6□□□□□ -1.67
SMG6-219ENST00000575663 TCF23Q7RTU1 214 aa4.6□□□□□ -1.67
SMG6-219ENST00000575663 ZNF573Q86YE8 665 aa4.6□□□□□ -1.67
SMG6-219ENST00000575663 THNSL2Q86YJ6 484 aa4.6□□□□□ -1.67
SMG6-219ENST00000575663 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.6□□□□□ -1.67
SMG6-219ENST00000575663 ZNF555Q8NEP9 628 aa4.6□□□□□ -1.67
SMG6-219ENST00000575663 OR52L1Q8NGH7 329 aa4.6□□□□□ -1.67
SMG6-219ENST00000575663 OR5A2Q8NGI9 324 aa4.6□□□□□ -1.67
SMG6-219ENST00000575663 TRMT10AQ8TBZ6 339 aaKnown RBP4.6□□□□□ -1.67
SMG6-219ENST00000575663 TOMM40LQ969M1 308 aa4.6□□□□□ -1.67
SMG6-219ENST00000575663 RPEQ96AT9 228 aa4.6□□□□□ -1.67
SMG6-219ENST00000575663 HRASLS5Q96KN8 279 aa4.6□□□□□ -1.67
SMG6-219ENST00000575663 ZNF488Q96MN9 340 aa4.6□□□□□ -1.67
SMG6-219ENST00000575663 SLC29A1Q99808 456 aa4.6□□□□□ -1.67
SMG6-219ENST00000575663 APOL4Q9BPW4 351 aa4.6□□□□□ -1.67
SMG6-219ENST00000575663 BCL7BQ9BQE9 202 aa4.6□□□□□ -1.67
SMG6-219ENST00000575663 FUZQ9BT04 418 aa4.6□□□□□ -1.67
SMG6-219ENST00000575663 ADI1Q9BV57 179 aa4.6□□□□□ -1.67
SMG6-219ENST00000575663 TEX12Q9BXU0 123 aa4.6□□□□□ -1.67
SMG6-219ENST00000575663 GABARAPL3Q9BY60 117 aa4.6□□□□□ -1.67
SMG6-219ENST00000575663 PRRG3Q9BZD7 231 aa4.6□□□□□ -1.67
SMG6-219ENST00000575663 GAL3ST2Q9H3Q3 398 aa4.6□□□□□ -1.67
SMG6-219ENST00000575663 GLS2Q9UI32 602 aa4.6□□□□□ -1.67
SMG6-219ENST00000575663 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.6□□□□□ -1.67
SMG6-219ENST00000575663 AMMECR1Q9Y4X0 333 aaPredicted RBP4.6□□□□□ -1.67
SMG6-219ENST00000575663 SAC3D1A6NKF1 404 aa4.59□□□□□ -1.67
SMG6-219ENST00000575663 HSBP1L1C9JCN9 74 aa4.59□□□□□ -1.67
SMG6-219ENST00000575663 H3BSH0 61 aa4.59□□□□□ -1.67
SMG6-219ENST00000575663 BUB1B-PAK6H3BSN5 160 aa4.59□□□□□ -1.67
SMG6-219ENST00000575663 ZNF593O00488 134 aaPredicted RBP4.59□□□□□ -1.67
SMG6-219ENST00000575663 DLGAP1O14490 977 aa4.59□□□□□ -1.67
SMG6-219ENST00000575663 NOS1APO75052 506 aaPredicted RBP4.59□□□□□ -1.67
SMG6-219ENST00000575663 H2BFMP0C1H6 154 aa4.59□□□□□ -1.67
SMG6-219ENST00000575663 OR8U9P0C7N5 309 aa4.59□□□□□ -1.67
SMG6-219ENST00000575663 NUP62P37198 522 aaPredicted RBP4.59□□□□□ -1.67
SMG6-219ENST00000575663 HTR2BP41595 481 aa4.59□□□□□ -1.67
SMG6-219ENST00000575663 MAP2K3P46734 347 aa4.59□□□□□ -1.67
SMG6-219ENST00000575663 TSPAN5P62079 268 aa4.59□□□□□ -1.67
SMG6-219ENST00000575663 C21orf62-AS1Q17RA5 79 aa4.59□□□□□ -1.67
SMG6-219ENST00000575663 KCTD21Q4G0X4 260 aa4.59□□□□□ -1.67
SMG6-219ENST00000575663 TEX30Q5JUR7 227 aa4.59□□□□□ -1.67
SMG6-219ENST00000575663 SLC25A30Q5SVS4 291 aa4.59□□□□□ -1.67
SMG6-219ENST00000575663 SLC35F1Q5T1Q4 408 aa4.59□□□□□ -1.67
SMG6-219ENST00000575663 ZNF684Q5T5D7 378 aa4.59□□□□□ -1.67
SMG6-219ENST00000575663 MOB3CQ70IA8 216 aa4.59□□□□□ -1.67
SMG6-219ENST00000575663 PRSS45Q7RTY3 260 aa4.59□□□□□ -1.67
SMG6-219ENST00000575663 COMMD2Q86X83 199 aa4.59□□□□□ -1.67
SMG6-219ENST00000575663 CLVS1Q8IUQ0 354 aaPredicted RBP4.59□□□□□ -1.67
SMG6-219ENST00000575663 CDH26Q8IXH8 852 aa4.59□□□□□ -1.67
SMG6-219ENST00000575663 RNF152Q8N8N0 203 aa4.59□□□□□ -1.67
SMG6-219ENST00000575663 ZNF454Q8N9F8 522 aa4.59□□□□□ -1.67
SMG6-219ENST00000575663 OR10G2Q8NGC3 310 aa4.59□□□□□ -1.67
SMG6-219ENST00000575663 OR51L1Q8NGJ5 315 aa4.59□□□□□ -1.67
SMG6-219ENST00000575663 OR1N2Q8NGR9 330 aa4.59□□□□□ -1.67
SMG6-219ENST00000575663 OR6K6Q8NGW6 343 aa4.59□□□□□ -1.67
SMG6-219ENST00000575663 OR6N2Q8NGY6 317 aa4.59□□□□□ -1.67
SMG6-219ENST00000575663 OR56B4Q8NH76 319 aa4.59□□□□□ -1.67
SMG6-219ENST00000575663 RNF133Q8WVZ7 376 aa4.59□□□□□ -1.67
SMG6-219ENST00000575663 SNX22Q96L94 193 aa4.59□□□□□ -1.67
SMG6-219ENST00000575663 FEVQ99581 238 aa4.59□□□□□ -1.67
SMG6-219ENST00000575663 HES4Q9HCC6 221 aa4.59□□□□□ -1.67
SMG6-219ENST00000575663 KRT84Q9NSB2 600 aa4.59□□□□□ -1.67
SMG6-219ENST00000575663 FAM118AQ9NWS6 357 aa4.59□□□□□ -1.67
SMG6-219ENST00000575663 UBE2J1Q9Y385 318 aaPredicted RBP4.59□□□□□ -1.67
SMG6-219ENST00000575663 ABCA13Q86UQ4 5058 aa4.58□□□□□ -1.68
SMG6-219ENST00000575663 TRGV10A0A0A0MS01 117 aa4.58□□□□□ -1.68
SMG6-219ENST00000575663 TRBV4-1A0A0J9YWV2 114 aa4.58□□□□□ -1.68
SMG6-219ENST00000575663 LOC100130705A0A1B0GUX0 176 aa4.58□□□□□ -1.68
SMG6-219ENST00000575663 FAM172BPA6NC97 362 aa4.58□□□□□ -1.68
SMG6-219ENST00000575663 HSPA12AO43301 675 aa4.58□□□□□ -1.68
SMG6-219ENST00000575663 GATCO43716 136 aaKnown RBP4.58□□□□□ -1.68
SMG6-219ENST00000575663 SSX5O60225 188 aa4.58□□□□□ -1.68
SMG6-219ENST00000575663 PSPNO60542 156 aa4.58□□□□□ -1.68
SMG6-219ENST00000575663 ZNF737O75373 536 aa4.58□□□□□ -1.68
SMG6-219ENST00000575663 IGLV1-47P01700 117 aa4.58□□□□□ -1.68
SMG6-219ENST00000575663 IGHG4P01861 327 aa4.58□□□□□ -1.68
SMG6-219ENST00000575663 OR5H8P0DN80 308 aa4.58□□□□□ -1.68
SMG6-219ENST00000575663 OSMP13725 252 aa4.58□□□□□ -1.68
SMG6-219ENST00000575663 SNRPBP14678 240 aaKnown RBP4.58□□□□□ -1.68
SMG6-219ENST00000575663 ARSBP15848 533 aa4.58□□□□□ -1.68
SMG6-219ENST00000575663 GABRR1P24046 479 aa4.58□□□□□ -1.68
SMG6-219ENST00000575663 CDK2P24941 298 aa4.58□□□□□ -1.68
SMG6-219ENST00000575663 CNTFRP26992 372 aa4.58□□□□□ -1.68
SMG6-219ENST00000575663 CD34P28906 385 aa4.58□□□□□ -1.68
SMG6-219ENST00000575663 OPRL1P41146 370 aa4.58□□□□□ -1.68
SMG6-219ENST00000575663 KIR3DL2P43630 455 aa4.58□□□□□ -1.68
SMG6-219ENST00000575663 PRRX1P54821 245 aa4.58□□□□□ -1.68
SMG6-219ENST00000575663 PSMA6P60900 246 aaKnown RBP4.58□□□□□ -1.68
SMG6-219ENST00000575663 CDC42P60953 191 aa4.58□□□□□ -1.68
SMG6-219ENST00000575663 ISL1P61371 349 aa4.58□□□□□ -1.68
SMG6-219ENST00000575663 RIPPLY1Q0D2K3 151 aa4.58□□□□□ -1.68
SMG6-219ENST00000575663 TSPAN31Q12999 210 aa4.58□□□□□ -1.68
SMG6-219ENST00000575663 GRK1Q15835 563 aa4.58□□□□□ -1.68
SMG6-219ENST00000575663 RBM48Q5RL73 367 aaKnown RBP4.58□□□□□ -1.68
SMG6-219ENST00000575663 PRAMEF5Q5TYX0 476 aa4.58□□□□□ -1.68
SMG6-219ENST00000575663 SLX4IPQ5VYV7 408 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms