RNA–Protein interactions for RNA: ENST00000574437.5

ABR-228, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 5 BASIC

Gene ABR, Length 3,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-228ENST00000574437 DSCR4P56555 118 aaPredicted RBP12.82□□□□□ -0.36
ABR-228ENST00000574437 RBM11P57052 281 aaKnown RBP12.82□□□□□ -0.36
ABR-228ENST00000574437 PSG4Q00888 419 aa12.82□□□□□ -0.36
ABR-228ENST00000574437 SPSB3Q6PJ21 355 aa12.82□□□□□ -0.36
ABR-228ENST00000574437 GAPTQ8N292 157 aa12.82□□□□□ -0.36
ABR-228ENST00000574437 FGFBP3Q8TAT2 258 aa12.82□□□□□ -0.36
ABR-228ENST00000574437 Q8WTZ3 238 aa12.82□□□□□ -0.36
ABR-228ENST00000574437 EXTL1Q92935 676 aa12.82□□□□□ -0.36
ABR-228ENST00000574437 MALSU1Q96EH3 234 aa12.82□□□□□ -0.36
ABR-228ENST00000574437 SPIN2AQ99865 258 aa12.82□□□□□ -0.36
ABR-228ENST00000574437 SPIN2BQ9BPZ2 258 aa12.82□□□□□ -0.36
ABR-228ENST00000574437 NIPSNAP3BQ9BS92 247 aa12.82□□□□□ -0.36
ABR-228ENST00000574437 TGIF2-C20orf24A0A0A6YYL0 155 aa12.81□□□□□ -0.36
ABR-228ENST00000574437 PROB1E7EW31 1015 aa12.81□□□□□ -0.36
ABR-228ENST00000574437 PPIHO43447 177 aaKnown RBP12.81□□□□□ -0.36
ABR-228ENST00000574437 CDS2O95674 445 aa12.81□□□□□ -0.36
ABR-228ENST00000574437 TK1P04183 234 aa12.81□□□□□ -0.36
ABR-228ENST00000574437 SCTP09683 121 aa12.81□□□□□ -0.36
ABR-228ENST00000574437 FUT6P51993 359 aa12.81□□□□□ -0.36
ABR-228ENST00000574437 CEACAM16Q2WEN9 425 aa12.81□□□□□ -0.36
ABR-228ENST00000574437 HIKESHIQ53FT3 197 aa12.81□□□□□ -0.36
ABR-228ENST00000574437 OR2B11Q5JQS5 317 aa12.81□□□□□ -0.36
ABR-228ENST00000574437 C9orf135Q5VTT2 229 aa12.81□□□□□ -0.36
ABR-228ENST00000574437 CCDC54Q8NEL0 328 aa12.81□□□□□ -0.36
ABR-228ENST00000574437 A0A087WZY1 265 aa12.81□□□□□ -0.36
ABR-228ENST00000574437 SRP19P09132 144 aaKnown RBP12.81□□□□□ -0.36
ABR-228ENST00000574437 ZNF818PQ6ZRF7 136 aa12.81□□□□□ -0.36
ABR-228ENST00000574437 FOXL2NBQ6ZUU3 175 aa12.81□□□□□ -0.36
ABR-228ENST00000574437 LURAP1LQ8IV03 231 aa12.81□□□□□ -0.36
ABR-228ENST00000574437 ZNF100Q8IYN0 542 aa12.81□□□□□ -0.36
ABR-228ENST00000574437 CMTM1Q8IZ96 169 aa12.81□□□□□ -0.36
ABR-228ENST00000574437 RNASE11Q8TAA1 199 aaKnown RBP12.81□□□□□ -0.36
ABR-228ENST00000574437 CHST1O43916 411 aa12.81□□□□□ -0.36
ABR-228ENST00000574437 CXCL13O43927 109 aa12.81□□□□□ -0.36
ABR-228ENST00000574437 PITX3O75364 302 aa12.81□□□□□ -0.36
ABR-228ENST00000574437 TRAPPC6AO75865 159 aa12.81□□□□□ -0.36
ABR-228ENST00000574437 DKK1O94907 266 aa12.81□□□□□ -0.36
ABR-228ENST00000574437 PCOLCEQ15113 449 aa12.81□□□□□ -0.36
ABR-228ENST00000574437 CDPF1Q6NVV7 123 aa12.81□□□□□ -0.36
ABR-228ENST00000574437 IL22RA1Q8N6P7 574 aa12.81□□□□□ -0.36
ABR-228ENST00000574437 OR10D4PQ8NGN7 298 aa12.81□□□□□ -0.36
ABR-228ENST00000574437 TMEM38BQ9NVV0 291 aa12.81□□□□□ -0.36
ABR-228ENST00000574437 LY86O95711 162 aa12.8□□□□□ -0.36
ABR-228ENST00000574437 HLA-HP01893 362 aa12.8□□□□□ -0.36
ABR-228ENST00000574437 SSR4P51571 173 aa12.8□□□□□ -0.36
ABR-228ENST00000574437 UCP3P55916 312 aa12.8□□□□□ -0.36
ABR-228ENST00000574437 PYY3Q5JQD4 70 aa12.8□□□□□ -0.36
ABR-228ENST00000574437 ZNF385CQ66K41 422 aaPredicted RBP12.8□□□□□ -0.36
ABR-228ENST00000574437 SELENOHQ8IZQ5 122 aaKnown RBP12.8□□□□□ -0.36
ABR-228ENST00000574437 PCED1AQ9H1Q7 454 aa12.8□□□□□ -0.36
ABR-228ENST00000574437 CCL28Q9NRJ3 127 aa12.8□□□□□ -0.36
ABR-228ENST00000574437 GAR1Q9NY12 217 aaKnown RBP12.8□□□□□ -0.36
ABR-228ENST00000574437 KIAA1456Q9P272 454 aa12.8□□□□□ -0.36
ABR-228ENST00000574437 GNG13Q9P2W3 67 aa12.8□□□□□ -0.36
ABR-228ENST00000574437 ZNF587BE7ETH6 402 aa12.8□□□□□ -0.36
ABR-228ENST00000574437 SCAF4O95104 1147 aaKnown RBP12.8□□□□□ -0.36
ABR-228ENST00000574437 TMEM50AO95807 157 aa12.8□□□□□ -0.36
ABR-228ENST00000574437 HOXA5P20719 270 aa12.8□□□□□ -0.36
ABR-228ENST00000574437 CARD18P57730 90 aa12.8□□□□□ -0.36
ABR-228ENST00000574437 ERVFRD-1P60508 538 aa12.8□□□□□ -0.36
ABR-228ENST00000574437 SRPXP78539 464 aa12.8□□□□□ -0.36
ABR-228ENST00000574437 ZXDAP98168 799 aa12.8□□□□□ -0.36
ABR-228ENST00000574437 HLA-BQ31612 363 aa12.8□□□□□ -0.36
ABR-228ENST00000574437 C4orf17Q53FE4 359 aa12.8□□□□□ -0.36
ABR-228ENST00000574437 THNSL2Q86YJ6 484 aa12.8□□□□□ -0.36
ABR-228ENST00000574437 C17orf78Q8N4C9 275 aa12.8□□□□□ -0.36
ABR-228ENST00000574437 ZNF610Q8N9Z0 462 aa12.8□□□□□ -0.36
ABR-228ENST00000574437 INTS12Q96CB8 462 aaKnown RBP12.8□□□□□ -0.36
ABR-228ENST00000574437 FOXB1Q99853 325 aa12.8□□□□□ -0.36
ABR-228ENST00000574437 LYRM2Q9NU23 88 aaPredicted RBP12.8□□□□□ -0.36
ABR-228ENST00000574437 FAM86C1Q9NVL1 165 aa12.8□□□□□ -0.36
ABR-228ENST00000574437 ZNF407Q9C0G0 2248 aa12.8□□□□□ -0.36
ABR-228ENST00000574437 URB1O60287 2271 aaKnown RBP12.79□□□□□ -0.36
ABR-228ENST00000574437 ZFP92A6NM28 416 aa12.79□□□□□ -0.36
ABR-228ENST00000574437 LAMTOR5O43504 91 aa12.79□□□□□ -0.36
ABR-228ENST00000574437 RAB11AP62491 216 aa12.79□□□□□ -0.36
ABR-228ENST00000574437 RAC1P63000 192 aa12.79□□□□□ -0.36
ABR-228ENST00000574437 IZUMO4Q1ZYL8 232 aa12.79□□□□□ -0.36
ABR-228ENST00000574437 TMEM211Q6ICI0 200 aa12.79□□□□□ -0.36
ABR-228ENST00000574437 SPNS3Q6ZMD2 512 aa12.79□□□□□ -0.36
ABR-228ENST00000574437 Q6ZSR3 168 aa12.79□□□□□ -0.36
ABR-228ENST00000574437 WDR5BQ86VZ2 330 aa12.79□□□□□ -0.36
ABR-228ENST00000574437 SNIP1Q8TAD8 396 aaKnown RBP12.79□□□□□ -0.36
ABR-228ENST00000574437 TVP23CQ96ET8 276 aa12.79□□□□□ -0.36
ABR-228ENST00000574437 IGKV1D-13A0A0B4J2D9 117 aa12.79□□□□□ -0.36
ABR-228ENST00000574437 TRGC2P03986 189 aa12.79□□□□□ -0.36
ABR-228ENST00000574437 IGKV1-13P0DP09 117 aa12.79□□□□□ -0.36
ABR-228ENST00000574437 CCL2P13500 99 aa12.79□□□□□ -0.36
ABR-228ENST00000574437 ICAM4Q14773 271 aa12.79□□□□□ -0.36
ABR-228ENST00000574437 ELOBQ15370 118 aa12.79□□□□□ -0.36
ABR-228ENST00000574437 ZNF383Q8NA42 475 aa12.79□□□□□ -0.36
ABR-228ENST00000574437 IL36RNQ9UBH0 155 aa12.79□□□□□ -0.36
ABR-228ENST00000574437 ASPMQ8IZT6 3477 aa12.79□□□□□ -0.36
ABR-228ENST00000574437 ZNF816-ZNF321PA0A0X1KG74 233 aa12.79□□□□□ -0.36
ABR-228ENST00000574437 hCG_38984A0A1B0GV85 526 aa12.79□□□□□ -0.36
ABR-228ENST00000574437 TERTO14746 1132 aaKnown RBP12.79□□□□□ -0.36
ABR-228ENST00000574437 TOX3O15405 576 aaPredicted RBP12.79□□□□□ -0.36
ABR-228ENST00000574437 NDUFS6O75380 124 aaKnown RBP12.79□□□□□ -0.36
ABR-228ENST00000574437 F10P00742 488 aa12.79□□□□□ -0.36
ABR-228ENST00000574437 CST2P09228 141 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms