RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 NCMAPQ5T1S8 102 aa16.39■□□□□ 0.21
SCARF1-206ENST00000573852 GAPTQ8N292 157 aa16.39■□□□□ 0.21
SCARF1-206ENST00000573852 TCTEX1D2Q8WW35 142 aa16.39■□□□□ 0.21
SCARF1-206ENST00000573852 PARPBPQ9NWS1 579 aa16.39■□□□□ 0.21
SCARF1-206ENST00000573852 IGKV1D-13A0A0B4J2D9 117 aa16.39■□□□□ 0.21
SCARF1-206ENST00000573852 H3BQ15 152 aa16.39■□□□□ 0.21
SCARF1-206ENST00000573852 NXPH3O95157 252 aa16.39■□□□□ 0.21
SCARF1-206ENST00000573852 IGKV1-13P0DP09 117 aa16.39■□□□□ 0.21
SCARF1-206ENST00000573852 CCL4P13236 92 aa16.39■□□□□ 0.21
SCARF1-206ENST00000573852 IL11RAQ14626 422 aa16.39■□□□□ 0.21
SCARF1-206ENST00000573852 MUCL1Q96DR8 90 aa16.39■□□□□ 0.21
SCARF1-206ENST00000573852 GPR35Q9HC97 309 aa16.39■□□□□ 0.21
SCARF1-206ENST00000573852 PPIHO43447 177 aaKnown RBP16.38■□□□□ 0.21
SCARF1-206ENST00000573852 FBP1P09467 338 aa16.38■□□□□ 0.21
SCARF1-206ENST00000573852 BCL3P20749 454 aa16.38■□□□□ 0.21
SCARF1-206ENST00000573852 SRD5A2P31213 254 aa16.38■□□□□ 0.21
SCARF1-206ENST00000573852 CXCL12P48061 93 aa16.38■□□□□ 0.21
SCARF1-206ENST00000573852 CEBPGP53567 150 aa16.38■□□□□ 0.21
SCARF1-206ENST00000573852 C1QL4Q86Z23 238 aa16.38■□□□□ 0.21
SCARF1-206ENST00000573852 TMEM217Q8N7C4 229 aa16.38■□□□□ 0.21
SCARF1-206ENST00000573852 CPEB3Q8NE35 698 aaKnown RBP16.38■□□□□ 0.21
SCARF1-206ENST00000573852 NAT6Q93015 286 aa16.38■□□□□ 0.21
SCARF1-206ENST00000573852 SIGLEC12Q96PQ1 595 aa16.38■□□□□ 0.21
SCARF1-206ENST00000573852 OR51M1Q9H341 326 aa16.38■□□□□ 0.21
SCARF1-206ENST00000573852 LIPGQ9Y5X9 500 aa16.38■□□□□ 0.21
SCARF1-206ENST00000573852 HSD17B6O14756 317 aa16.38■□□□□ 0.21
SCARF1-206ENST00000573852 IFNA17P01571 189 aa16.38■□□□□ 0.21
SCARF1-206ENST00000573852 SRP19P09132 144 aaKnown RBP16.38■□□□□ 0.21
SCARF1-206ENST00000573852 VAMP2P63027 116 aa16.38■□□□□ 0.21
SCARF1-206ENST00000573852 RUNX1Q01196 453 aa16.38■□□□□ 0.21
SCARF1-206ENST00000573852 HERPUD1Q15011 391 aa16.38■□□□□ 0.21
SCARF1-206ENST00000573852 SP5Q6BEB4 398 aaPredicted RBP16.38■□□□□ 0.21
SCARF1-206ENST00000573852 RAB39BQ96DA2 213 aa16.38■□□□□ 0.21
SCARF1-206ENST00000573852 SPIN2AQ99865 258 aa16.38■□□□□ 0.21
SCARF1-206ENST00000573852 SPIN2BQ9BPZ2 258 aa16.38■□□□□ 0.21
SCARF1-206ENST00000573852 SLC25A31Q9H0C2 315 aa16.38■□□□□ 0.21
SCARF1-206ENST00000573852 Q9N2K0 584 aa16.38■□□□□ 0.21
SCARF1-206ENST00000573852 CRIM1Q9NZV1 1036 aa16.38■□□□□ 0.21
SCARF1-206ENST00000573852 MMP24Q9Y5R2 645 aa16.38■□□□□ 0.21
SCARF1-206ENST00000573852 FREM2Q5SZK8 3169 aa16.38■□□□□ 0.21
SCARF1-206ENST00000573852 MMP7P09237 267 aaPredicted RBP16.37■□□□□ 0.21
SCARF1-206ENST00000573852 CLDN15P56746 228 aa16.37■□□□□ 0.21
SCARF1-206ENST00000573852 PCBD1P61457 104 aa16.37■□□□□ 0.21
SCARF1-206ENST00000573852 HLA-BQ31612 363 aa16.37■□□□□ 0.21
SCARF1-206ENST00000573852 SLC23A3Q6PIS1 610 aa16.37■□□□□ 0.21
SCARF1-206ENST00000573852 OR10D3Q8NH80 312 aa16.37■□□□□ 0.21
SCARF1-206ENST00000573852 PLPPR1Q8TBJ4 325 aa16.37■□□□□ 0.21
SCARF1-206ENST00000573852 SPSB4Q96A44 273 aa16.37■□□□□ 0.21
SCARF1-206ENST00000573852 FGF23Q9GZV9 251 aaPredicted RBP16.37■□□□□ 0.21
SCARF1-206ENST00000573852 FAM86C1Q9NVL1 165 aa16.37■□□□□ 0.21
SCARF1-206ENST00000573852 SLC22A20A6NK97 555 aa16.37■□□□□ 0.21
SCARF1-206ENST00000573852 H0YL77 283 aa16.37■□□□□ 0.21
SCARF1-206ENST00000573852 IGHV3-9P01782 118 aa16.37■□□□□ 0.21
SCARF1-206ENST00000573852 TK1P04183 234 aa16.37■□□□□ 0.21
SCARF1-206ENST00000573852 NMSQ5H8A3 153 aa16.37■□□□□ 0.21
SCARF1-206ENST00000573852 ACER2Q5QJU3 275 aa16.37■□□□□ 0.21
SCARF1-206ENST00000573852 WDR5BQ86VZ2 330 aa16.37■□□□□ 0.21
SCARF1-206ENST00000573852 Q8NFD4 153 aa16.37■□□□□ 0.21
SCARF1-206ENST00000573852 SNIP1Q8TAD8 396 aaKnown RBP16.37■□□□□ 0.21
SCARF1-206ENST00000573852 IFI44Q8TCB0 444 aa16.37■□□□□ 0.21
SCARF1-206ENST00000573852 C1QTNF5Q9BXJ0 243 aa16.37■□□□□ 0.21
SCARF1-206ENST00000573852 UBE2ZQ9H832 354 aaPredicted RBP16.37■□□□□ 0.21
SCARF1-206ENST00000573852 KIAA1456Q9P272 454 aa16.37■□□□□ 0.21
SCARF1-206ENST00000573852 IL36RNQ9UBH0 155 aa16.37■□□□□ 0.21
SCARF1-206ENST00000573852 HSPA12AO43301 675 aa16.36■□□□□ 0.21
SCARF1-206ENST00000573852 RPS10P46783 165 aaKnown RBP16.36■□□□□ 0.21
SCARF1-206ENST00000573852 ID3Q02535 119 aa16.36■□□□□ 0.21
SCARF1-206ENST00000573852 LYSMD4Q5XG99 296 aa16.36■□□□□ 0.21
SCARF1-206ENST00000573852 ABLIM2Q6H8Q1 611 aa16.36■□□□□ 0.21
SCARF1-206ENST00000573852 Q6ZS49 121 aa16.36■□□□□ 0.21
SCARF1-206ENST00000573852 OR8G5Q8NG78 346 aa16.36■□□□□ 0.21
SCARF1-206ENST00000573852 KCNE4Q8WWG9 221 aa16.36■□□□□ 0.21
SCARF1-206ENST00000573852 ADGRG7Q96K78 797 aa16.36■□□□□ 0.21
SCARF1-206ENST00000573852 TECTBQ96PL2 329 aa16.36■□□□□ 0.21
SCARF1-206ENST00000573852 ZNF732B4DXR9 585 aa16.36■□□□□ 0.21
SCARF1-206ENST00000573852 NAPSAO96009 420 aa16.36■□□□□ 0.21
SCARF1-206ENST00000573852 ICAM4Q14773 271 aa16.36■□□□□ 0.21
SCARF1-206ENST00000573852 WIPI1Q5MNZ9 446 aaPredicted RBP16.36■□□□□ 0.21
SCARF1-206ENST00000573852 RIPPLY2Q5TAB7 128 aa16.36■□□□□ 0.21
SCARF1-206ENST00000573852 OR2Y1Q8NGV0 311 aa16.36■□□□□ 0.21
SCARF1-206ENST00000573852 EDARADDQ8WWZ3 215 aa16.36■□□□□ 0.21
SCARF1-206ENST00000573852 CCL28Q9NRJ3 127 aa16.36■□□□□ 0.21
SCARF1-206ENST00000573852 C9J4A7 227 aa16.35■□□□□ 0.21
SCARF1-206ENST00000573852 HSPB6O14558 160 aa16.35■□□□□ 0.21
SCARF1-206ENST00000573852 TAGLN2P37802 199 aaKnown RBP16.35■□□□□ 0.21
SCARF1-206ENST00000573852 ZNF154Q13106 437 aa16.35■□□□□ 0.21
SCARF1-206ENST00000573852 ZNF343Q6P1L6 599 aa16.35■□□□□ 0.21
SCARF1-206ENST00000573852 OR56B2PQ8NGI1 322 aa16.35■□□□□ 0.21
SCARF1-206ENST00000573852 OR2V1Q8NHB1 315 aa16.35■□□□□ 0.21
SCARF1-206ENST00000573852 ABHD3Q8WU67 409 aa16.35■□□□□ 0.21
SCARF1-206ENST00000573852 IGKV1-6A0A0C4DH72 117 aa16.35■□□□□ 0.21
SCARF1-206ENST00000573852 CLEC18AA5D8T8 446 aa16.35■□□□□ 0.21
SCARF1-206ENST00000573852 BTBD17A6NE02 478 aa16.35■□□□□ 0.21
SCARF1-206ENST00000573852 CHST1O43916 411 aa16.35■□□□□ 0.21
SCARF1-206ENST00000573852 YIF1AO95070 293 aa16.35■□□□□ 0.21
SCARF1-206ENST00000573852 IL22RA1Q8N6P7 574 aa16.35■□□□□ 0.21
SCARF1-206ENST00000573852 CYB561D1Q8N8Q1 229 aa16.35■□□□□ 0.21
SCARF1-206ENST00000573852 CLEC18CQ8NCF0 446 aa16.35■□□□□ 0.21
SCARF1-206ENST00000573852 ZNF845Q96IR2 970 aaPredicted RBP16.35■□□□□ 0.21
SCARF1-206ENST00000573852 DMDP11532 3685 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms