RNA–Protein interactions for RNA: ENST00000573474.5

CCDC40-209, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 554 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-209ENST00000573474 Q6ZS49 121 aa11.45□□□□□ -0.58
CCDC40-209ENST00000573474 GAPTQ8N292 157 aa11.45□□□□□ -0.58
CCDC40-209ENST00000573474 ZNF561Q8N587 486 aa11.45□□□□□ -0.58
CCDC40-209ENST00000573474 ASCC1Q8N9N2 400 aaKnown RBP11.45□□□□□ -0.58
CCDC40-209ENST00000573474 DUSP18Q8NEJ0 188 aa11.45□□□□□ -0.58
CCDC40-209ENST00000573474 PLPPR1Q8TBJ4 325 aa11.45□□□□□ -0.58
CCDC40-209ENST00000573474 MAFIPQ8WZ33 124 aa11.45□□□□□ -0.58
CCDC40-209ENST00000573474 DPAGT1Q9H3H5 408 aa11.45□□□□□ -0.58
CCDC40-209ENST00000573474 ZNF286AQ9HBT8 521 aa11.45□□□□□ -0.58
CCDC40-209ENST00000573474 MCUBQ9NWR8 336 aa11.45□□□□□ -0.58
CCDC40-209ENST00000573474 DYSFO75923 2080 aa11.45□□□□□ -0.58
CCDC40-209ENST00000573474 TMEM30CPA0ZSE6 113 aa11.44□□□□□ -0.58
CCDC40-209ENST00000573474 DISC1C4P0D8 188 aa11.44□□□□□ -0.58
CCDC40-209ENST00000573474 M0QYG6 137 aa11.44□□□□□ -0.58
CCDC40-209ENST00000573474 FSTL3O95633 263 aa11.44□□□□□ -0.58
CCDC40-209ENST00000573474 PMP2P02689 132 aa11.44□□□□□ -0.58
CCDC40-209ENST00000573474 GYPAP02724 150 aa11.44□□□□□ -0.58
CCDC40-209ENST00000573474 GIFP27352 417 aa11.44□□□□□ -0.58
CCDC40-209ENST00000573474 HRH1P35367 487 aa11.44□□□□□ -0.58
CCDC40-209ENST00000573474 ATXN7L3Q14CW9 347 aaPredicted RBP11.44□□□□□ -0.58
CCDC40-209ENST00000573474 KCNJ8Q15842 424 aa11.44□□□□□ -0.58
CCDC40-209ENST00000573474 CHRFAM7AQ494W8 412 aa11.44□□□□□ -0.58
CCDC40-209ENST00000573474 PLA1AQ53H76 456 aa11.44□□□□□ -0.58
CCDC40-209ENST00000573474 SLC35E4Q6ICL7 350 aa11.44□□□□□ -0.58
CCDC40-209ENST00000573474 ZNF880Q6PDB4 577 aa11.44□□□□□ -0.58
CCDC40-209ENST00000573474 ZNF782Q6ZMW2 699 aaPredicted RBP11.44□□□□□ -0.58
CCDC40-209ENST00000573474 OR5AP2Q8NGF4 316 aa11.44□□□□□ -0.58
CCDC40-209ENST00000573474 OR4D10Q8NGI6 311 aa11.44□□□□□ -0.58
CCDC40-209ENST00000573474 OR5H2Q8NGV7 314 aa11.44□□□□□ -0.58
CCDC40-209ENST00000573474 MRPL30Q8TCC3 161 aaKnown RBP11.44□□□□□ -0.58
CCDC40-209ENST00000573474 TINAGL1Q9GZM7 467 aaPredicted RBP11.44□□□□□ -0.58
CCDC40-209ENST00000573474 SHARPINQ9H0F6 387 aa11.44□□□□□ -0.58
CCDC40-209ENST00000573474 DNTTIP1Q9H147 329 aa11.44□□□□□ -0.58
CCDC40-209ENST00000573474 OCEL1Q9H607 264 aa11.44□□□□□ -0.58
CCDC40-209ENST00000573474 ZNF665Q9H7R5 613 aa11.44□□□□□ -0.58
CCDC40-209ENST00000573474 Q9N2K0 584 aa11.44□□□□□ -0.58
CCDC40-209ENST00000573474 MYOZ1Q9NP98 299 aaPredicted RBP11.44□□□□□ -0.58
CCDC40-209ENST00000573474 COPZ2Q9P299 210 aa11.44□□□□□ -0.58
CCDC40-209ENST00000573474 SPTAN1Q13813 2472 aaKnown RBP11.44□□□□□ -0.58
CCDC40-209ENST00000573474 IGKV1D-8A0A087WSZ0 117 aa11.43□□□□□ -0.58
CCDC40-209ENST00000573474 NKX6-3A6NJ46 265 aa11.43□□□□□ -0.58
CCDC40-209ENST00000573474 LYNX1G3V0Z9 82 aa11.43□□□□□ -0.58
CCDC40-209ENST00000573474 K7N7A8 449 aa11.43□□□□□ -0.58
CCDC40-209ENST00000573474 OVOL3O00110 214 aa11.43□□□□□ -0.58
CCDC40-209ENST00000573474 MGST3O14880 152 aa11.43□□□□□ -0.58
CCDC40-209ENST00000573474 NDUFA2O43678 99 aa11.43□□□□□ -0.58
CCDC40-209ENST00000573474 RP2O75695 350 aa11.43□□□□□ -0.58
CCDC40-209ENST00000573474 F12P00748 615 aaPredicted RBP11.43□□□□□ -0.58
CCDC40-209ENST00000573474 IFNA6P05013 189 aa11.43□□□□□ -0.58
CCDC40-209ENST00000573474 CSN2P05814 226 aa11.43□□□□□ -0.58
CCDC40-209ENST00000573474 ZNF735P0CB33 412 aa11.43□□□□□ -0.58
CCDC40-209ENST00000573474 LYNX1P0DP58 116 aa11.43□□□□□ -0.58
CCDC40-209ENST00000573474 DAOP14920 347 aa11.43□□□□□ -0.58
CCDC40-209ENST00000573474 CDKN1AP38936 164 aa11.43□□□□□ -0.58
CCDC40-209ENST00000573474 OR3A3P47888 321 aa11.43□□□□□ -0.58
CCDC40-209ENST00000573474 ARPC4P59998 168 aa11.43□□□□□ -0.58
CCDC40-209ENST00000573474 PAX5Q02548 391 aa11.43□□□□□ -0.58
CCDC40-209ENST00000573474 GRK1Q15835 563 aa11.43□□□□□ -0.58
CCDC40-209ENST00000573474 VAX1Q5SQQ9 334 aa11.43□□□□□ -0.58
CCDC40-209ENST00000573474 RSBN1Q5VWQ0 802 aaPredicted RBP11.43□□□□□ -0.58
CCDC40-209ENST00000573474 FAAP20Q6NZ36 180 aa11.43□□□□□ -0.58
CCDC40-209ENST00000573474 ZNF788Q6ZQV5 615 aa11.43□□□□□ -0.58
CCDC40-209ENST00000573474 MOB1BQ7L9L4 216 aa11.43□□□□□ -0.58
CCDC40-209ENST00000573474 PEG10Q86TG7 708 aaKnown RBP11.43□□□□□ -0.58
CCDC40-209ENST00000573474 OR5D13Q8NGL4 314 aa11.43□□□□□ -0.58
CCDC40-209ENST00000573474 OR56B4Q8NH76 319 aa11.43□□□□□ -0.58
CCDC40-209ENST00000573474 MED30Q96HR3 178 aa11.43□□□□□ -0.58
CCDC40-209ENST00000573474 GAFA1Q96PS6 74 aa11.43□□□□□ -0.58
CCDC40-209ENST00000573474 CCL13Q99616 98 aa11.43□□□□□ -0.58
CCDC40-209ENST00000573474 FAM234AQ9H0X4 552 aa11.43□□□□□ -0.58
CCDC40-209ENST00000573474 ANXA10Q9UJ72 324 aa11.43□□□□□ -0.58
CCDC40-209ENST00000573474 MGAT4AQ9UM21 535 aa11.43□□□□□ -0.58
CCDC40-209ENST00000573474 MAB21L2Q9Y586 359 aa11.43□□□□□ -0.58
CCDC40-209ENST00000573474 HRNRQ86YZ3 2850 aaPredicted RBP11.43□□□□□ -0.58
CCDC40-209ENST00000573474 LRRK2Q5S007 2527 aa11.43□□□□□ -0.58
CCDC40-209ENST00000573474 RAI1Q7Z5J4 1906 aaPredicted RBP11.43□□□□□ -0.58
CCDC40-209ENST00000573474 KIR2DS1A0A191URI9 304 aa11.42□□□□□ -0.58
CCDC40-209ENST00000573474 TRDCB7Z8K6 153 aa11.42□□□□□ -0.58
CCDC40-209ENST00000573474 TNFRSF13BO14836 293 aaPredicted RBP11.42□□□□□ -0.58
CCDC40-209ENST00000573474 SIGLEC5O15389 551 aa11.42□□□□□ -0.58
CCDC40-209ENST00000573474 TK1P04183 234 aa11.42□□□□□ -0.58
CCDC40-209ENST00000573474 AMY2AP04746 511 aa11.42□□□□□ -0.58
CCDC40-209ENST00000573474 KIR2DS4P43632 304 aa11.42□□□□□ -0.58
CCDC40-209ENST00000573474 CCR6P51684 374 aa11.42□□□□□ -0.58
CCDC40-209ENST00000573474 EFNA4P52798 201 aa11.42□□□□□ -0.58
CCDC40-209ENST00000573474 BTG1P62324 171 aa11.42□□□□□ -0.58
CCDC40-209ENST00000573474 IL13RA1P78552 427 aa11.42□□□□□ -0.58
CCDC40-209ENST00000573474 KIR2DS1Q14954 304 aa11.42□□□□□ -0.58
CCDC40-209ENST00000573474 CDK10Q15131 360 aa11.42□□□□□ -0.58
CCDC40-209ENST00000573474 ZMYND11Q15326 602 aa11.42□□□□□ -0.58
CCDC40-209ENST00000573474 KRBOX4Q5JUW0 171 aa11.42□□□□□ -0.58
CCDC40-209ENST00000573474 PLET1Q6UQ28 207 aa11.42□□□□□ -0.58
CCDC40-209ENST00000573474 Q6ZPA2 131 aa11.42□□□□□ -0.58
CCDC40-209ENST00000573474 ZNF295-AS1Q8N0V1 137 aa11.42□□□□□ -0.58
CCDC40-209ENST00000573474 ZNRF1Q8ND25 227 aa11.42□□□□□ -0.58
CCDC40-209ENST00000573474 OR51S1Q8NGJ8 323 aa11.42□□□□□ -0.58
CCDC40-209ENST00000573474 IGFBPL1Q8WX77 278 aa11.42□□□□□ -0.58
CCDC40-209ENST00000573474 SLC6A7Q99884 636 aa11.42□□□□□ -0.58
CCDC40-209ENST00000573474 PRRT1Q99946 306 aa11.42□□□□□ -0.58
CCDC40-209ENST00000573474 ING3Q9NXR8 418 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms