RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 NIPAL2Q9H841 368 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 WDR76Q9H967 626 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 NTN4Q9HB63 628 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 SLC25A19Q9HC21 320 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 CENPMQ9NSP4 180 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 DDX28Q9NUL7 540 aaKnown RBP3.11□□□□□ -1.91
NUP88-202ENST00000570937 TMEM100Q9NV29 134 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 MRPL22Q9NWU5 206 aaKnown RBP3.11□□□□□ -1.91
NUP88-202ENST00000570937 VNN3Q9NY84 501 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 IL19Q9UHD0 177 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 ZNF391Q9UJN7 358 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 LAMP5Q9UJQ1 280 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 PURGQ9UJV8 347 aaKnown RBP3.11□□□□□ -1.91
NUP88-202ENST00000570937 STARD10Q9Y365 291 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 COMMD3-BMI1R4GMX3 469 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 CCDC168Q8NDH2 2452 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 ITPR3Q14573 2671 aa3.1□□□□□ -1.91
NUP88-202ENST00000570937 CSMD1Q96PZ7 3565 aa3.1□□□□□ -1.91
NUP88-202ENST00000570937 HEATR1Q9H583 2144 aaKnown RBP3.1□□□□□ -1.91
NUP88-202ENST00000570937 PRRC2AP48634 2157 aaKnown RBP3.1□□□□□ -1.91
NUP88-202ENST00000570937 GGT3PA6NGU5 568 aa3.1□□□□□ -1.91
NUP88-202ENST00000570937 TVP23AA6NH52 213 aa3.1□□□□□ -1.91
NUP88-202ENST00000570937 FAM183AA6NL82 134 aa3.1□□□□□ -1.91
NUP88-202ENST00000570937 ANXA2P2A6NMY6 339 aa3.1□□□□□ -1.91
NUP88-202ENST00000570937 ANKRD30BLA7E2S9 258 aa3.1□□□□□ -1.91
NUP88-202ENST00000570937 IQCF6A8MYZ5 107 aa3.1□□□□□ -1.91
NUP88-202ENST00000570937 B4DSR2 109 aa3.1□□□□□ -1.91
NUP88-202ENST00000570937 XRCC2O43543 280 aa3.1□□□□□ -1.91
NUP88-202ENST00000570937 CD5LO43866 347 aa3.1□□□□□ -1.91
NUP88-202ENST00000570937 MPZL2O60487 215 aa3.1□□□□□ -1.91
NUP88-202ENST00000570937 GMDSO60547 372 aa3.1□□□□□ -1.91
NUP88-202ENST00000570937 ZNF254O75437 659 aa3.1□□□□□ -1.91
NUP88-202ENST00000570937 LY6HO94772 140 aa3.1□□□□□ -1.91
NUP88-202ENST00000570937 BAG2O95816 211 aa3.1□□□□□ -1.91
NUP88-202ENST00000570937 IGHV1-46P01743 117 aa3.1□□□□□ -1.91
NUP88-202ENST00000570937 GYPBP06028 91 aa3.1□□□□□ -1.91
NUP88-202ENST00000570937 LYNP07948 512 aa3.1□□□□□ -1.91
NUP88-202ENST00000570937 CD55P08174 381 aa3.1□□□□□ -1.91
NUP88-202ENST00000570937 IGFBP1P08833 259 aaPredicted RBP3.1□□□□□ -1.91
NUP88-202ENST00000570937 H2BFMP0C1H6 154 aa3.1□□□□□ -1.91
NUP88-202ENST00000570937 ACSM4P0C7M7 580 aa3.1□□□□□ -1.91
NUP88-202ENST00000570937 SPP1P10451 314 aa3.1□□□□□ -1.91
NUP88-202ENST00000570937 BCL3P20749 454 aa3.1□□□□□ -1.91
NUP88-202ENST00000570937 HNF1AP20823 631 aa3.1□□□□□ -1.91
NUP88-202ENST00000570937 MAGEB1P43366 347 aa3.1□□□□□ -1.91
NUP88-202ENST00000570937 CX3CR1P49238 355 aa3.1□□□□□ -1.91
NUP88-202ENST00000570937 DAPP51397 102 aa3.1□□□□□ -1.91
NUP88-202ENST00000570937 ERVS71-1P61550 626 aa3.1□□□□□ -1.91
NUP88-202ENST00000570937 TNFAIP6P98066 277 aaPredicted RBP3.1□□□□□ -1.91
NUP88-202ENST00000570937 APOFQ13790 326 aa3.1□□□□□ -1.91
NUP88-202ENST00000570937 GK2Q14410 553 aaPredicted RBP3.1□□□□□ -1.91
NUP88-202ENST00000570937 MAD2L1BPQ15013 274 aaPredicted RBP3.1□□□□□ -1.91
NUP88-202ENST00000570937 TMEM249Q2WGJ8 235 aa3.1□□□□□ -1.91
NUP88-202ENST00000570937 MEDAGQ5VYS4 303 aa3.1□□□□□ -1.91
NUP88-202ENST00000570937 NXNL2Q5VZ03 156 aa3.1□□□□□ -1.91
NUP88-202ENST00000570937 TMEM236Q5W0B7 351 aa3.1□□□□□ -1.91
NUP88-202ENST00000570937 KDM4DQ6B0I6 523 aa3.1□□□□□ -1.91
NUP88-202ENST00000570937 ACSM5Q6NUN0 579 aa3.1□□□□□ -1.91
NUP88-202ENST00000570937 DEGS2Q6QHC5 323 aa3.1□□□□□ -1.91
NUP88-202ENST00000570937 DHRS11Q6UWP2 260 aa3.1□□□□□ -1.91
NUP88-202ENST00000570937 RFPL4BQ6ZWI9 263 aa3.1□□□□□ -1.91
NUP88-202ENST00000570937 DPY19L4Q7Z388 723 aa3.1□□□□□ -1.91
NUP88-202ENST00000570937 TMEM179BQ7Z7N9 219 aa3.1□□□□□ -1.91
NUP88-202ENST00000570937 HS3ST5Q8IZT8 346 aa3.1□□□□□ -1.91
NUP88-202ENST00000570937 ZNF283Q8N7M2 679 aa3.1□□□□□ -1.91
NUP88-202ENST00000570937 SPERTQ8NA61 448 aa3.1□□□□□ -1.91
NUP88-202ENST00000570937 OR8G5Q8NG78 346 aa3.1□□□□□ -1.91
NUP88-202ENST00000570937 OR11L1Q8NGX0 322 aa3.1□□□□□ -1.91
NUP88-202ENST00000570937 OR6N2Q8NGY6 317 aa3.1□□□□□ -1.91
NUP88-202ENST00000570937 OTOSQ8NHW6 89 aa3.1□□□□□ -1.91
NUP88-202ENST00000570937 ST7LQ8TDW4 575 aa3.1□□□□□ -1.91
NUP88-202ENST00000570937 THEM6Q8WUY1 208 aa3.1□□□□□ -1.91
NUP88-202ENST00000570937 RNF133Q8WVZ7 376 aa3.1□□□□□ -1.91
NUP88-202ENST00000570937 SLC7A6Q92536 515 aa3.1□□□□□ -1.91
NUP88-202ENST00000570937 RAB39BQ96DA2 213 aa3.1□□□□□ -1.91
NUP88-202ENST00000570937 ZMYND19Q96E35 227 aaPredicted RBP3.1□□□□□ -1.91
NUP88-202ENST00000570937 MRPL48Q96GC5 212 aaKnown RBP3.1□□□□□ -1.91
NUP88-202ENST00000570937 Q96MT0 163 aa3.1□□□□□ -1.91
NUP88-202ENST00000570937 CNN2Q99439 309 aaKnown RBP3.1□□□□□ -1.91
NUP88-202ENST00000570937 TEAD3Q99594 435 aa3.1□□□□□ -1.91
NUP88-202ENST00000570937 C9orf16Q9BUW7 83 aa3.1□□□□□ -1.91
NUP88-202ENST00000570937 BEX2Q9BXY8 128 aa3.1□□□□□ -1.91
NUP88-202ENST00000570937 KRTAP4-3Q9BYR4 195 aa3.1□□□□□ -1.91
NUP88-202ENST00000570937 BPESC1Q9GZL8 116 aa3.1□□□□□ -1.91
NUP88-202ENST00000570937 YIPF3Q9GZM5 350 aa3.1□□□□□ -1.91
NUP88-202ENST00000570937 RIBC2Q9H4K1 309 aa3.1□□□□□ -1.91
NUP88-202ENST00000570937 MARCH7Q9H992 704 aa3.1□□□□□ -1.91
NUP88-202ENST00000570937 S100A14Q9HCY8 104 aa3.1□□□□□ -1.91
NUP88-202ENST00000570937 ABCB9Q9NP78 766 aa3.1□□□□□ -1.91
NUP88-202ENST00000570937 C8orf4Q9NR00 106 aa3.1□□□□□ -1.91
NUP88-202ENST00000570937 YAE1D1Q9NRH1 226 aa3.1□□□□□ -1.91
NUP88-202ENST00000570937 IMPAD1Q9NX62 359 aa3.1□□□□□ -1.91
NUP88-202ENST00000570937 PTTG3PQ9NZH4 202 aa3.1□□□□□ -1.91
NUP88-202ENST00000570937 MYEF2Q9P2K5 600 aaKnown RBP3.1□□□□□ -1.91
NUP88-202ENST00000570937 WARS2Q9UGM6 360 aaKnown RBP3.1□□□□□ -1.91
NUP88-202ENST00000570937 N6AMT1Q9Y5N5 214 aa3.1□□□□□ -1.91
NUP88-202ENST00000570937 RAI1Q7Z5J4 1906 aaPredicted RBP3.1□□□□□ -1.91
NUP88-202ENST00000570937 ALPK2Q86TB3 2170 aa3.1□□□□□ -1.91
NUP88-202ENST00000570937 AKAP6Q13023 2319 aa3.09□□□□□ -1.91
NUP88-202ENST00000570937 HIVEP1P15822 2718 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms