RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 MCFD2Q8NI22 146 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 ZNF675Q8TD23 568 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 SMAP2Q8WU79 429 aaPredicted RBP3.05□□□□□ -1.92
SMG6-208ENST00000570874 HPSE2Q8WWQ2 592 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 GEMIN6Q8WXD5 167 aaKnown RBP3.05□□□□□ -1.92
SMG6-208ENST00000570874 GCDHQ92947 438 aaPredicted RBP3.05□□□□□ -1.92
SMG6-208ENST00000570874 SNAPC3Q92966 411 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 ZNF524Q96C55 264 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 ZNF501Q96CX3 271 aaPredicted RBP3.05□□□□□ -1.92
SMG6-208ENST00000570874 GRAMD2BQ96HH9 432 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 ZNF354BQ96LW1 612 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 CLCC1Q96S66 551 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 SDF2Q99470 211 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 PITX2Q99697 317 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 SIGMAR1Q99720 223 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 ABHD14AQ9BUJ0 271 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 DUSP23Q9BVJ7 150 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 HCAR1Q9BXC0 346 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 ALOXE3Q9BYJ1 711 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 TBL1XR1Q9BZK7 514 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 OR11A1Q9GZK7 315 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 SLIRPQ9GZT3 109 aaKnown RBP3.05□□□□□ -1.92
SMG6-208ENST00000570874 CHRNA10Q9GZZ6 450 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 ARRDC1-AS1Q9H2J1 176 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 C5orf66Q9H5L9 145 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 ESRP2Q9H6T0 727 aaKnown RBP3.05□□□□□ -1.92
SMG6-208ENST00000570874 AAMDCQ9H7C9 122 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 Q9H8V8 135 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 BCL2L10Q9HD36 194 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 RETNQ9HD89 108 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 ACOT13Q9NPJ3 140 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 HINT3Q9NQE9 182 aaKnown RBP3.05□□□□□ -1.92
SMG6-208ENST00000570874 DLL4Q9NR61 685 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 MCUBQ9NWR8 336 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 OCIAD1Q9NX40 245 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 SPANXCQ9NY87 97 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 NTMQ9P121 344 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 PRODH2Q9UF12 536 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 ZNF107Q9UII5 783 aaPredicted RBP3.05□□□□□ -1.92
SMG6-208ENST00000570874 ING4Q9UNL4 249 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 TCF19Q9Y242 345 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 ZNF443Q9Y2A4 671 aaPredicted RBP3.05□□□□□ -1.92
SMG6-208ENST00000570874 SLC35A3Q9Y2D2 325 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 RCL1Q9Y2P8 373 aaKnown RBP3.05□□□□□ -1.92
SMG6-208ENST00000570874 AMDHD2Q9Y303 409 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 NSG2Q9Y328 171 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 SIGLEC9Q9Y336 463 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 R4GN57 208 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 CNTRLQ7Z7A1 2325 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 DNAJC13O75165 2243 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 ESPL1Q14674 2120 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 MED12LQ86YW9 2145 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 GTF3C1Q12789 2109 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 DOCK7Q96N67 2140 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 A0A0A0MQY5 61 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 G3V4G9 280 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 FAAHO00519 579 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 ORC5O43913 435 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 ZNF354AO60765 605 aaPredicted RBP3.04□□□□□ -1.92
SMG6-208ENST00000570874 ZG16O60844 167 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 FOXH1O75593 365 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 KCNK2O95069 426 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 GADD45GO95257 159 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 LYPD3O95274 346 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 WISP1O95388 367 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 IL18BPO95998 194 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 IFNA17P01571 189 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 C1QBP02746 253 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 H1F0P07305 194 aaKnown RBP3.04□□□□□ -1.92
SMG6-208ENST00000570874 TACSTD2P09758 323 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 OR8U8P0C7N1 319 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 OR13C7P0DN81 318 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 LIPCP11150 499 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 PIPP12273 146 aaPredicted RBP3.04□□□□□ -1.92
SMG6-208ENST00000570874 FSTP19883 344 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 MAKP20794 623 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 ITPKBP27987 946 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 HTR1DP28221 377 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 GLP1RP43220 463 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 ZNF136P52737 540 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 HMGA2P52926 109 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 GP2P55259 537 aaKnown RBP3.04□□□□□ -1.92
SMG6-208ENST00000570874 OR10A3P58181 314 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 SMIM11AP58511 58 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 SUMO2P61956 95 aaKnown RBP3.04□□□□□ -1.92
SMG6-208ENST00000570874 RRAS2P62070 204 aaPredicted RBP3.04□□□□□ -1.92
SMG6-208ENST00000570874 HNRNPA0Q13151 305 aaKnown RBP3.04□□□□□ -1.92
SMG6-208ENST00000570874 GINS1Q14691 196 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 MEF2DQ14814 521 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 RSU1Q15404 277 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 SURF2Q15527 256 aaPredicted RBP3.04□□□□□ -1.92
SMG6-208ENST00000570874 OR1C1Q15619 314 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 TAB1Q15750 504 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 TAF9Q16594 264 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 MICAQ29983 383 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 CD300EQ496F6 205 aaPredicted RBP3.04□□□□□ -1.92
SMG6-208ENST00000570874 TP53I3Q53FA7 332 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 HSD17B12Q53GQ0 312 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 ENTPD8Q5MY95 495 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 MRPL2Q5T653 305 aaKnown RBP3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms