RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 ZNF816-ZNF321PA0A0X1KG74 233 aa13.25□□□□□ -0.29
USP43-202ENST00000570475 ZNF587BE7ETH6 402 aa13.25□□□□□ -0.29
USP43-202ENST00000570475 H3BQ15 152 aa13.25□□□□□ -0.29
USP43-202ENST00000570475 TUSC2O75896 110 aa13.25□□□□□ -0.29
USP43-202ENST00000570475 METTL15P1P0C7V9 234 aa13.25□□□□□ -0.29
USP43-202ENST00000570475 ARF1P84077 181 aaKnown RBP13.25□□□□□ -0.29
USP43-202ENST00000570475 LTC4SQ16873 150 aa13.25□□□□□ -0.29
USP43-202ENST00000570475 FAM209BQ5JX69 171 aa13.25□□□□□ -0.29
USP43-202ENST00000570475 SPANXN5Q5MJ07 72 aa13.25□□□□□ -0.29
USP43-202ENST00000570475 FAM27BQ5VT28 67 aa13.25□□□□□ -0.29
USP43-202ENST00000570475 WDR5BQ86VZ2 330 aa13.25□□□□□ -0.29
USP43-202ENST00000570475 PLPPR2Q96GM1 343 aa13.25□□□□□ -0.29
USP43-202ENST00000570475 STARD10Q9Y365 291 aa13.25□□□□□ -0.29
USP43-202ENST00000570475 WDFY3Q8IZQ1 3526 aa13.25□□□□□ -0.29
USP43-202ENST00000570475 POLEQ07864 2286 aa13.24□□□□□ -0.29
USP43-202ENST00000570475 GAPDHP04406 335 aaKnown RBP13.24□□□□□ -0.29
USP43-202ENST00000570475 SEC11BP0C7V7 166 aa13.24□□□□□ -0.29
USP43-202ENST00000570475 NKX6-1P78426 367 aaPredicted RBP13.24□□□□□ -0.29
USP43-202ENST00000570475 PCOLCEQ15113 449 aa13.24□□□□□ -0.29
USP43-202ENST00000570475 LILRB1Q8NHL6 650 aaPredicted RBP13.24□□□□□ -0.29
USP43-202ENST00000570475 TMEM38BQ9NVV0 291 aa13.24□□□□□ -0.29
USP43-202ENST00000570475 IGSF23A1L1A6 192 aa13.24□□□□□ -0.29
USP43-202ENST00000570475 CEBPZOSA8MTT3 80 aa13.24□□□□□ -0.29
USP43-202ENST00000570475 PLP2Q04941 152 aa13.24□□□□□ -0.29
USP43-202ENST00000570475 OR10D4PQ8NGN7 298 aa13.24□□□□□ -0.29
USP43-202ENST00000570475 NUDT16L1Q9BRJ7 211 aaKnown RBP13.24□□□□□ -0.29
USP43-202ENST00000570475 PLA2G3Q9NZ20 509 aa13.24□□□□□ -0.29
USP43-202ENST00000570475 CD300LBA8K4G0 201 aa13.23□□□□□ -0.29
USP43-202ENST00000570475 TMEM252Q8N6L7 170 aa13.23□□□□□ -0.29
USP43-202ENST00000570475 CPT1CQ8TCG5 803 aa13.23□□□□□ -0.29
USP43-202ENST00000570475 RAB39BQ96DA2 213 aa13.23□□□□□ -0.29
USP43-202ENST00000570475 RSG1Q9BU20 258 aa13.23□□□□□ -0.29
USP43-202ENST00000570475 TMED3Q9Y3Q3 217 aa13.23□□□□□ -0.29
USP43-202ENST00000570475 V9GYS6 101 aa13.23□□□□□ -0.29
USP43-202ENST00000570475 SIRPB1O00241 398 aa13.23□□□□□ -0.29
USP43-202ENST00000570475 PRDX4Q13162 271 aa13.23□□□□□ -0.29
USP43-202ENST00000570475 ZNF239Q16600 458 aaKnown RBP13.23□□□□□ -0.29
USP43-202ENST00000570475 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.23□□□□□ -0.29
USP43-202ENST00000570475 NABP1Q96AH0 204 aa13.23□□□□□ -0.29
USP43-202ENST00000570475 HS3ST6Q96QI5 342 aa13.23□□□□□ -0.29
USP43-202ENST00000570475 OR2H1Q9GZK4 316 aa13.23□□□□□ -0.29
USP43-202ENST00000570475 S100A8P05109 93 aa13.23□□□□□ -0.29
USP43-202ENST00000570475 CCL1P22362 96 aa13.23□□□□□ -0.29
USP43-202ENST00000570475 NTF4P34130 210 aa13.23□□□□□ -0.29
USP43-202ENST00000570475 SUCLG1P53597 346 aaKnown RBP13.23□□□□□ -0.29
USP43-202ENST00000570475 PCBD1P61457 104 aa13.23□□□□□ -0.29
USP43-202ENST00000570475 RND3P61587 244 aa13.23□□□□□ -0.29
USP43-202ENST00000570475 DLK1P80370 383 aa13.23□□□□□ -0.29
USP43-202ENST00000570475 HIST2H3PS2Q5TEC6 136 aa13.23□□□□□ -0.29
USP43-202ENST00000570475 ZNF818PQ6ZRF7 136 aa13.23□□□□□ -0.29
USP43-202ENST00000570475 ZIC4Q8N9L1 334 aa13.23□□□□□ -0.29
USP43-202ENST00000570475 NTNG2Q96CW9 530 aa13.23□□□□□ -0.29
USP43-202ENST00000570475 PLEKHF2Q9H8W4 249 aa13.23□□□□□ -0.29
USP43-202ENST00000570475 STRAPQ9Y3F4 350 aaKnown RBP13.23□□□□□ -0.29
USP43-202ENST00000570475 RAC3P60763 192 aa13.22□□□□□ -0.29
USP43-202ENST00000570475 IL13RA2Q14627 380 aa13.22□□□□□ -0.29
USP43-202ENST00000570475 TM2D1Q9BX74 207 aa13.22□□□□□ -0.29
USP43-202ENST00000570475 GSN-AS1Q9NRJ2 163 aa13.22□□□□□ -0.29
USP43-202ENST00000570475 WDFY4Q6ZS81 3184 aa13.22□□□□□ -0.29
USP43-202ENST00000570475 FRYQ5TBA9 3013 aa13.22□□□□□ -0.29
USP43-202ENST00000570475 AP4M1O00189 453 aa13.22□□□□□ -0.29
USP43-202ENST00000570475 NGFP01138 241 aa13.22□□□□□ -0.29
USP43-202ENST00000570475 ALDH3B1P43353 468 aa13.22□□□□□ -0.29
USP43-202ENST00000570475 RBM11P57052 281 aaKnown RBP13.22□□□□□ -0.29
USP43-202ENST00000570475 EXT1Q16394 746 aa13.22□□□□□ -0.29
USP43-202ENST00000570475 TOLLIPQ9H0E2 274 aa13.22□□□□□ -0.29
USP43-202ENST00000570475 TRAPPC2LQ9UL33 140 aa13.22□□□□□ -0.29
USP43-202ENST00000570475 EIF2S3P41091 472 aaKnown RBP13.22□□□□□ -0.29
USP43-202ENST00000570475 CYB561P49447 251 aa13.22□□□□□ -0.29
USP43-202ENST00000570475 ZNF808Q8N4W9 903 aaPredicted RBP13.22□□□□□ -0.29
USP43-202ENST00000570475 FREM2Q5SZK8 3169 aa13.22□□□□□ -0.29
USP43-202ENST00000570475 IGLV3-12A0A075B6K2 115 aa13.21□□□□□ -0.29
USP43-202ENST00000570475 OR6C6A6NF89 314 aa13.21□□□□□ -0.29
USP43-202ENST00000570475 SOX15O60248 233 aa13.21□□□□□ -0.29
USP43-202ENST00000570475 MMP9P14780 707 aa13.21□□□□□ -0.29
USP43-202ENST00000570475 ADIRFQ15847 76 aa13.21□□□□□ -0.29
USP43-202ENST00000570475 ACER2Q5QJU3 275 aa13.21□□□□□ -0.29
USP43-202ENST00000570475 TDHQ8IZJ6 230 aa13.21□□□□□ -0.29
USP43-202ENST00000570475 CARFQ8N187 725 aa13.21□□□□□ -0.29
USP43-202ENST00000570475 OR2V1Q8NHB1 315 aa13.21□□□□□ -0.29
USP43-202ENST00000570475 OR10J5Q8NHC4 309 aa13.21□□□□□ -0.29
USP43-202ENST00000570475 INTS12Q96CB8 462 aaKnown RBP13.21□□□□□ -0.29
USP43-202ENST00000570475 PRO1933Q9H354 126 aa13.21□□□□□ -0.29
USP43-202ENST00000570475 TGIF2-C20orf24A0A0A6YYL0 155 aa13.21□□□□□ -0.29
USP43-202ENST00000570475 IGKV1D-13A0A0B4J2D9 117 aa13.21□□□□□ -0.29
USP43-202ENST00000570475 SYNGR1O43759 233 aa13.21□□□□□ -0.29
USP43-202ENST00000570475 CLN5O75503 358 aa13.21□□□□□ -0.29
USP43-202ENST00000570475 SYNGR4O95473 234 aa13.21□□□□□ -0.29
USP43-202ENST00000570475 IGKV1-13P0DP09 117 aa13.21□□□□□ -0.29
USP43-202ENST00000570475 FOXG1P55316 489 aaPredicted RBP13.21□□□□□ -0.29
USP43-202ENST00000570475 B2MP61769 119 aa13.21□□□□□ -0.29
USP43-202ENST00000570475 SPINK9Q5DT21 86 aa13.21□□□□□ -0.29
USP43-202ENST00000570475 TRIM61Q5EBN2 209 aa13.21□□□□□ -0.29
USP43-202ENST00000570475 OR2T2Q6IF00 324 aa13.21□□□□□ -0.29
USP43-202ENST00000570475 MAFAQ8NHW3 353 aaPredicted RBP13.21□□□□□ -0.29
USP43-202ENST00000570475 THOC3Q96J01 351 aaKnown RBP13.21□□□□□ -0.29
USP43-202ENST00000570475 UNKLQ9H9P5 680 aaKnown RBP13.21□□□□□ -0.29
USP43-202ENST00000570475 TUBD1Q9UJT1 453 aa13.21□□□□□ -0.29
USP43-202ENST00000570475 POMT1Q9Y6A1 747 aa13.21□□□□□ -0.29
USP43-202ENST00000570475 A0A087WZY1 265 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms