RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 OLFML2AQ68BL7 652 aa10.55□□□□□ -0.72
CNOT1-220ENST00000569916 BAIAP2L2Q6UXY1 529 aa10.55□□□□□ -0.72
CNOT1-220ENST00000569916 HEPN1Q6WQI6 88 aa10.55□□□□□ -0.72
CNOT1-220ENST00000569916 Q6ZSV7 163 aa10.55□□□□□ -0.72
CNOT1-220ENST00000569916 LYPD6Q86Y78 171 aa10.55□□□□□ -0.72
CNOT1-220ENST00000569916 OSR2Q8N2R0 312 aa10.55□□□□□ -0.72
CNOT1-220ENST00000569916 LINC01006Q8NI28 216 aa10.55□□□□□ -0.72
CNOT1-220ENST00000569916 PIFOQ8TCI5 191 aa10.55□□□□□ -0.72
CNOT1-220ENST00000569916 THRSPQ92748 146 aa10.55□□□□□ -0.72
CNOT1-220ENST00000569916 FOXRED1Q96CU9 486 aaPredicted RBP10.55□□□□□ -0.72
CNOT1-220ENST00000569916 CLEC7AQ9BXN2 247 aa10.55□□□□□ -0.72
CNOT1-220ENST00000569916 DUSP21Q9H596 190 aa10.55□□□□□ -0.72
CNOT1-220ENST00000569916 IFT22Q9H7X7 185 aa10.55□□□□□ -0.72
CNOT1-220ENST00000569916 ST3GAL6Q9Y274 331 aa10.55□□□□□ -0.72
CNOT1-220ENST00000569916 TPRKBQ9Y3C4 175 aa10.55□□□□□ -0.72
CNOT1-220ENST00000569916 A0A1W2PP11 408 aa10.54□□□□□ -0.72
CNOT1-220ENST00000569916 VGLL3A8MV65 326 aa10.54□□□□□ -0.72
CNOT1-220ENST00000569916 CSTBP04080 98 aaKnown RBP10.54□□□□□ -0.72
CNOT1-220ENST00000569916 MAS1P04201 325 aa10.54□□□□□ -0.72
CNOT1-220ENST00000569916 CDK2P24941 298 aa10.54□□□□□ -0.72
CNOT1-220ENST00000569916 MAPK3P27361 379 aaPredicted RBP10.54□□□□□ -0.72
CNOT1-220ENST00000569916 HSPA13P48723 471 aa10.54□□□□□ -0.72
CNOT1-220ENST00000569916 PAX5Q02548 391 aa10.54□□□□□ -0.72
CNOT1-220ENST00000569916 DYNC1I2Q13409 638 aaKnown RBP10.54□□□□□ -0.72
CNOT1-220ENST00000569916 INSL4Q14641 139 aa10.54□□□□□ -0.72
CNOT1-220ENST00000569916 SPHARQ15513 63 aa10.54□□□□□ -0.72
CNOT1-220ENST00000569916 LY6EQ16553 131 aa10.54□□□□□ -0.72
CNOT1-220ENST00000569916 C17orf58Q2M2W7 97 aa10.54□□□□□ -0.72
CNOT1-220ENST00000569916 SLC22A6Q4U2R8 563 aa10.54□□□□□ -0.72
CNOT1-220ENST00000569916 RSBN1Q5VWQ0 802 aaPredicted RBP10.54□□□□□ -0.72
CNOT1-220ENST00000569916 JAGN1Q8N5M9 183 aa10.54□□□□□ -0.72
CNOT1-220ENST00000569916 PLPPR1Q8TBJ4 325 aa10.54□□□□□ -0.72
CNOT1-220ENST00000569916 MUL1Q969V5 352 aa10.54□□□□□ -0.72
CNOT1-220ENST00000569916 MALSU1Q96EH3 234 aa10.54□□□□□ -0.72
CNOT1-220ENST00000569916 S100A13Q99584 98 aa10.54□□□□□ -0.72
CNOT1-220ENST00000569916 KIF25Q9UIL4 384 aa10.54□□□□□ -0.72
CNOT1-220ENST00000569916 MRPS28Q9Y2Q9 187 aaKnown RBP10.54□□□□□ -0.72
CNOT1-220ENST00000569916 MEGF11A6BM72 1044 aa10.53□□□□□ -0.72
CNOT1-220ENST00000569916 FAM172BPA6NC97 362 aa10.53□□□□□ -0.72
CNOT1-220ENST00000569916 ZNF729A6NN14 1252 aaPredicted RBP10.53□□□□□ -0.72
CNOT1-220ENST00000569916 GEMIN2O14893 280 aaKnown RBP10.53□□□□□ -0.72
CNOT1-220ENST00000569916 RGS10O43665 173 aa10.53□□□□□ -0.72
CNOT1-220ENST00000569916 ZNF780AO75290 641 aaPredicted RBP10.53□□□□□ -0.72
CNOT1-220ENST00000569916 SC5DO75845 299 aa10.53□□□□□ -0.72
CNOT1-220ENST00000569916 TSPAN9O75954 239 aa10.53□□□□□ -0.72
CNOT1-220ENST00000569916 OR7C1O76099 320 aaPredicted RBP10.53□□□□□ -0.72
CNOT1-220ENST00000569916 ATP6V1G2O95670 118 aa10.53□□□□□ -0.72
CNOT1-220ENST00000569916 CGB3P0DN86 165 aa10.53□□□□□ -0.72
CNOT1-220ENST00000569916 CGB7P0DN87 165 aa10.53□□□□□ -0.72
CNOT1-220ENST00000569916 CRHBPP24387 322 aa10.53□□□□□ -0.72
CNOT1-220ENST00000569916 CD34P28906 385 aa10.53□□□□□ -0.72
CNOT1-220ENST00000569916 GLP1RP43220 463 aa10.53□□□□□ -0.72
CNOT1-220ENST00000569916 KCNJ3P48549 501 aa10.53□□□□□ -0.72
CNOT1-220ENST00000569916 GP2P55259 537 aaKnown RBP10.53□□□□□ -0.72
CNOT1-220ENST00000569916 MED22Q15528 200 aa10.53□□□□□ -0.72
CNOT1-220ENST00000569916 SSX2Q16385 188 aa10.53□□□□□ -0.72
CNOT1-220ENST00000569916 PLA1AQ53H76 456 aa10.53□□□□□ -0.72
CNOT1-220ENST00000569916 FAM27D1Q5T7N8 215 aa10.53□□□□□ -0.72
CNOT1-220ENST00000569916 MINOS1Q5TGZ0 78 aa10.53□□□□□ -0.72
CNOT1-220ENST00000569916 OR52W1Q6IF63 320 aa10.53□□□□□ -0.72
CNOT1-220ENST00000569916 UNQ9370/PRO34162Q6UXP9 181 aa10.53□□□□□ -0.72
CNOT1-220ENST00000569916 LINC00596Q86U02 117 aa10.53□□□□□ -0.72
CNOT1-220ENST00000569916 CDH26Q8IXH8 852 aa10.53□□□□□ -0.72
CNOT1-220ENST00000569916 NKAIN3Q8N8D7 197 aa10.53□□□□□ -0.72
CNOT1-220ENST00000569916 SUMF2Q8NBJ7 301 aa10.53□□□□□ -0.72
CNOT1-220ENST00000569916 OR4D6Q8NGJ1 314 aa10.53□□□□□ -0.72
CNOT1-220ENST00000569916 OR4P4Q8NGL7 312 aa10.53□□□□□ -0.72
CNOT1-220ENST00000569916 OR13A1Q8NGR1 328 aa10.53□□□□□ -0.72
CNOT1-220ENST00000569916 SGMS2Q8NHU3 365 aa10.53□□□□□ -0.72
CNOT1-220ENST00000569916 DPCDQ9BVM2 203 aaPredicted RBP10.53□□□□□ -0.72
CNOT1-220ENST00000569916 NCOR1P1Q9H4R4 102 aa10.53□□□□□ -0.72
CNOT1-220ENST00000569916 C16orf95Q9H693 158 aa10.53□□□□□ -0.72
CNOT1-220ENST00000569916 OR6C3Q9NZP0 311 aa10.53□□□□□ -0.72
CNOT1-220ENST00000569916 RNF114Q9Y508 228 aa10.53□□□□□ -0.72
CNOT1-220ENST00000569916 MINOS1-NBL1R4GNA1 71 aa10.53□□□□□ -0.72
CNOT1-220ENST00000569916 MEIKINA0A087WXM9 373 aa10.52□□□□□ -0.73
CNOT1-220ENST00000569916 CHST1O43916 411 aa10.52□□□□□ -0.73
CNOT1-220ENST00000569916 GTF2F2P13984 249 aa10.52□□□□□ -0.73
CNOT1-220ENST00000569916 JUNBP17275 347 aaPredicted RBP10.52□□□□□ -0.73
CNOT1-220ENST00000569916 PROK1P58294 105 aa10.52□□□□□ -0.73
CNOT1-220ENST00000569916 KRTAP10-3P60369 221 aa10.52□□□□□ -0.73
CNOT1-220ENST00000569916 SRSF4Q08170 494 aaKnown RBP10.52□□□□□ -0.73
CNOT1-220ENST00000569916 GPR50Q13585 617 aa10.52□□□□□ -0.73
CNOT1-220ENST00000569916 GPR176Q14439 515 aa10.52□□□□□ -0.73
CNOT1-220ENST00000569916 FAM189A2Q15884 450 aa10.52□□□□□ -0.73
CNOT1-220ENST00000569916 MPV17LQ2QL34 196 aa10.52□□□□□ -0.73
CNOT1-220ENST00000569916 ACSM3Q53FZ2 586 aa10.52□□□□□ -0.73
CNOT1-220ENST00000569916 UTF1Q5T230 341 aa10.52□□□□□ -0.73
CNOT1-220ENST00000569916 AWAT2Q6E213 333 aa10.52□□□□□ -0.73
CNOT1-220ENST00000569916 GLIPR1L1Q6UWM5 242 aa10.52□□□□□ -0.73
CNOT1-220ENST00000569916 ABHD12Q8N2K0 398 aa10.52□□□□□ -0.73
CNOT1-220ENST00000569916 MS4A15Q8N5U1 240 aa10.52□□□□□ -0.73
CNOT1-220ENST00000569916 NDNFQ8TB73 568 aa10.52□□□□□ -0.73
CNOT1-220ENST00000569916 KIRREL1Q96J84 757 aa10.52□□□□□ -0.73
CNOT1-220ENST00000569916 CNBD2Q96M20 576 aa10.52□□□□□ -0.73
CNOT1-220ENST00000569916 TMED9Q9BVK6 235 aa10.52□□□□□ -0.73
CNOT1-220ENST00000569916 BARHL1Q9BZE3 327 aa10.52□□□□□ -0.73
CNOT1-220ENST00000569916 ZNF286AQ9HBT8 521 aa10.52□□□□□ -0.73
CNOT1-220ENST00000569916 PCDHB16Q9NRJ7 776 aa10.52□□□□□ -0.73
CNOT1-220ENST00000569916 CALYQ9NYX4 217 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms