RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 RPL12P30050 165 aaKnown RBP7.55□□□□□ -1.2
LINC00558-201ENST00000569422 FUT6P51993 359 aa7.55□□□□□ -1.2
LINC00558-201ENST00000569422 RAB1AP62820 205 aa7.55□□□□□ -1.2
LINC00558-201ENST00000569422 ARL6IP1Q15041 203 aa7.55□□□□□ -1.2
LINC00558-201ENST00000569422 DCAF10Q5QP82 559 aa7.55□□□□□ -1.2
LINC00558-201ENST00000569422 FAM71E2Q8N5Q1 922 aa7.55□□□□□ -1.2
LINC00558-201ENST00000569422 TMEM251Q8N6I4 163 aa7.55□□□□□ -1.2
LINC00558-201ENST00000569422 FAM173AQ9BQD7 235 aa7.55□□□□□ -1.2
LINC00558-201ENST00000569422 TAF9BQ9HBM6 251 aa7.55□□□□□ -1.2
LINC00558-201ENST00000569422 CLEC5AQ9NY25 188 aa7.55□□□□□ -1.2
LINC00558-201ENST00000569422 B4GALT7Q9UBV7 327 aa7.55□□□□□ -1.2
LINC00558-201ENST00000569422 MEMO1Q9Y316 297 aa7.55□□□□□ -1.2
LINC00558-201ENST00000569422 SHANK1Q9Y566 2161 aa7.55□□□□□ -1.2
LINC00558-201ENST00000569422 MED13Q9UHV7 2174 aa7.55□□□□□ -1.2
LINC00558-201ENST00000569422 NCKAP5O14513 1909 aa7.55□□□□□ -1.2
LINC00558-201ENST00000569422 ABCD4O14678 606 aa7.55□□□□□ -1.2
LINC00558-201ENST00000569422 HS3ST1O14792 307 aa7.55□□□□□ -1.2
LINC00558-201ENST00000569422 SLC31A2O15432 143 aa7.55□□□□□ -1.2
LINC00558-201ENST00000569422 MED6O75586 246 aa7.55□□□□□ -1.2
LINC00558-201ENST00000569422 TNFSF15O95150 251 aa7.55□□□□□ -1.2
LINC00558-201ENST00000569422 ZNF708P17019 499 aa7.55□□□□□ -1.2
LINC00558-201ENST00000569422 BLOC1S1P78537 153 aa7.55□□□□□ -1.2
LINC00558-201ENST00000569422 PRDX4Q13162 271 aa7.55□□□□□ -1.2
LINC00558-201ENST00000569422 HIKESHIQ53FT3 197 aa7.55□□□□□ -1.2
LINC00558-201ENST00000569422 UBALD1Q8TB05 177 aa7.55□□□□□ -1.2
LINC00558-201ENST00000569422 RNF141Q8WVD5 230 aa7.55□□□□□ -1.2
LINC00558-201ENST00000569422 SECTM1Q8WVN6 248 aa7.55□□□□□ -1.2
LINC00558-201ENST00000569422 C10orf35Q96D05 121 aa7.55□□□□□ -1.2
LINC00558-201ENST00000569422 ZNF703Q9H7S9 590 aaPredicted RBP7.55□□□□□ -1.2
LINC00558-201ENST00000569422 LHX6Q9UPM6 363 aa7.55□□□□□ -1.2
LINC00558-201ENST00000569422 STARD10Q9Y365 291 aa7.55□□□□□ -1.2
LINC00558-201ENST00000569422 DOCK10Q96BY6 2186 aa7.54□□□□□ -1.2
LINC00558-201ENST00000569422 TNFSF12O43508 249 aa7.54□□□□□ -1.2
LINC00558-201ENST00000569422 DNPH1O43598 174 aa7.54□□□□□ -1.2
LINC00558-201ENST00000569422 CRYGCP07315 174 aa7.54□□□□□ -1.2
LINC00558-201ENST00000569422 MMP7P09237 267 aaPredicted RBP7.54□□□□□ -1.2
LINC00558-201ENST00000569422 AADACP22760 399 aa7.54□□□□□ -1.2
LINC00558-201ENST00000569422 LHX2P50458 406 aa7.54□□□□□ -1.2
LINC00558-201ENST00000569422 HERV-K104P61576 105 aa7.54□□□□□ -1.2
LINC00558-201ENST00000569422 GUCA2BQ16661 112 aa7.54□□□□□ -1.2
LINC00558-201ENST00000569422 EIF2S3LQ2VIR3 472 aaKnown RBP7.54□□□□□ -1.2
LINC00558-201ENST00000569422 NUFIP2Q7Z417 695 aaKnown RBP7.54□□□□□ -1.2
LINC00558-201ENST00000569422 PHYHIPLQ96FC7 376 aa7.54□□□□□ -1.2
LINC00558-201ENST00000569422 BSCL2Q96G97 398 aaPredicted RBP7.54□□□□□ -1.2
LINC00558-201ENST00000569422 UNKLQ9H9P5 680 aaKnown RBP7.54□□□□□ -1.2
LINC00558-201ENST00000569422 ZNF286AQ9HBT8 521 aa7.54□□□□□ -1.2
LINC00558-201ENST00000569422 SLC2A9Q9NRM0 540 aa7.54□□□□□ -1.2
LINC00558-201ENST00000569422 PRSS50Q9UI38 385 aa7.54□□□□□ -1.2
LINC00558-201ENST00000569422 CACNA1HO95180 2353 aa7.54□□□□□ -1.2
LINC00558-201ENST00000569422 TRAV39A0A0B4J263 110 aa7.54□□□□□ -1.2
LINC00558-201ENST00000569422 CRYM-AS1A6NIL9 109 aa7.54□□□□□ -1.2
LINC00558-201ENST00000569422 CEACAM18A8MTB9 384 aa7.54□□□□□ -1.2
LINC00558-201ENST00000569422 ZNF732B4DXR9 585 aa7.54□□□□□ -1.2
LINC00558-201ENST00000569422 PDCD6O75340 191 aa7.54□□□□□ -1.2
LINC00558-201ENST00000569422 CTSDP07339 412 aaPredicted RBP7.54□□□□□ -1.2
LINC00558-201ENST00000569422 PET100P0DJ07 73 aa7.54□□□□□ -1.2
LINC00558-201ENST00000569422 HKR1P10072 659 aa7.54□□□□□ -1.2
LINC00558-201ENST00000569422 SPEM2Q0P670 501 aa7.54□□□□□ -1.2
LINC00558-201ENST00000569422 NSUN5P2Q63ZY6 315 aa7.54□□□□□ -1.2
LINC00558-201ENST00000569422 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.54□□□□□ -1.2
LINC00558-201ENST00000569422 C17orf78Q8N4C9 275 aa7.54□□□□□ -1.2
LINC00558-201ENST00000569422 APH1AQ96BI3 265 aa7.54□□□□□ -1.2
LINC00558-201ENST00000569422 ABI3Q9P2A4 366 aa7.54□□□□□ -1.2
LINC00558-201ENST00000569422 FBXL17Q9UF56 701 aa7.54□□□□□ -1.2
LINC00558-201ENST00000569422 LIPGQ9Y5X9 500 aa7.54□□□□□ -1.2
LINC00558-201ENST00000569422 CNOT1A5YKK6 2376 aaKnown RBP7.54□□□□□ -1.2
LINC00558-201ENST00000569422 BOD1L1Q8NFC6 3051 aa7.54□□□□□ -1.2
LINC00558-201ENST00000569422 LILRA1O75019 489 aa7.53□□□□□ -1.2
LINC00558-201ENST00000569422 MT-CO3P00414 261 aa7.53□□□□□ -1.2
LINC00558-201ENST00000569422 GPX4P36969 197 aaPredicted RBP7.53□□□□□ -1.2
LINC00558-201ENST00000569422 GLP1RP43220 463 aa7.53□□□□□ -1.2
LINC00558-201ENST00000569422 CLDN18P56856 261 aa7.53□□□□□ -1.2
LINC00558-201ENST00000569422 TMEM33P57088 247 aa7.53□□□□□ -1.2
LINC00558-201ENST00000569422 ZNF273Q14593 569 aa7.53□□□□□ -1.2
LINC00558-201ENST00000569422 H3F3CQ6NXT2 135 aa7.53□□□□□ -1.2
LINC00558-201ENST00000569422 HAGHLQ6PII5 290 aaPredicted RBP7.53□□□□□ -1.2
LINC00558-201ENST00000569422 Q6ZPA2 131 aa7.53□□□□□ -1.2
LINC00558-201ENST00000569422 RDH5Q92781 318 aa7.53□□□□□ -1.2
LINC00558-201ENST00000569422 EXTL1Q92935 676 aa7.53□□□□□ -1.2
LINC00558-201ENST00000569422 ERGIC1Q969X5 290 aa7.53□□□□□ -1.2
LINC00558-201ENST00000569422 CNTNAP3BQ96NU0 1288 aa7.53□□□□□ -1.2
LINC00558-201ENST00000569422 CNTNAP3Q9BZ76 1288 aa7.53□□□□□ -1.2
LINC00558-201ENST00000569422 SLC5A7Q9GZV3 580 aa7.53□□□□□ -1.2
LINC00558-201ENST00000569422 PIGMQ9H3S5 423 aa7.53□□□□□ -1.2
LINC00558-201ENST00000569422 ZNF552Q9H707 407 aaPredicted RBP7.53□□□□□ -1.2
LINC00558-201ENST00000569422 TMEM140Q9NV12 185 aa7.53□□□□□ -1.2
LINC00558-201ENST00000569422 SYNGR1O43759 233 aa7.53□□□□□ -1.2
LINC00558-201ENST00000569422 SCTP09683 121 aa7.53□□□□□ -1.2
LINC00558-201ENST00000569422 SP9P0CG40 484 aa7.53□□□□□ -1.2
LINC00558-201ENST00000569422 FUT3P21217 361 aa7.53□□□□□ -1.2
LINC00558-201ENST00000569422 MEOX1P50221 254 aa7.53□□□□□ -1.2
LINC00558-201ENST00000569422 RBM11P57052 281 aaKnown RBP7.53□□□□□ -1.2
LINC00558-201ENST00000569422 SELENOVP59797 346 aa7.53□□□□□ -1.2
LINC00558-201ENST00000569422 RIPPLY2Q5TAB7 128 aa7.53□□□□□ -1.2
LINC00558-201ENST00000569422 RTL6Q6ICC9 239 aa7.53□□□□□ -1.2
LINC00558-201ENST00000569422 ARL11Q969Q4 196 aa7.53□□□□□ -1.2
LINC00558-201ENST00000569422 ZNF479Q96JC4 524 aa7.53□□□□□ -1.2
LINC00558-201ENST00000569422 LURAP1Q96LR2 239 aa7.53□□□□□ -1.2
LINC00558-201ENST00000569422 HIST1H2AAQ96QV6 131 aa7.53□□□□□ -1.2
LINC00558-201ENST00000569422 NKX6-2Q9C056 277 aaPredicted RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms