RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 C11orf53Q8IXP5 236 aa5.98□□□□□ -1.45
SMG1-215ENST00000568239 LRRC29Q8WV35 223 aa5.98□□□□□ -1.45
SMG1-215ENST00000568239 IL1F10Q8WWZ1 152 aa5.98□□□□□ -1.45
SMG1-215ENST00000568239 HYLS1Q96M11 299 aa5.98□□□□□ -1.45
SMG1-215ENST00000568239 PHB2Q99623 299 aa5.98□□□□□ -1.45
SMG1-215ENST00000568239 USB1Q9BQ65 265 aaKnown RBP5.98□□□□□ -1.45
SMG1-215ENST00000568239 RANBP3Q9H6Z4 567 aaPredicted RBP5.98□□□□□ -1.45
SMG1-215ENST00000568239 PRR13Q9NZ81 148 aa5.98□□□□□ -1.45
SMG1-215ENST00000568239 TREM2Q9NZC2 230 aa5.98□□□□□ -1.45
SMG1-215ENST00000568239 RCC2Q9P258 522 aaKnown RBP5.98□□□□□ -1.45
SMG1-215ENST00000568239 RFPL4AA6NLU0 287 aa5.97□□□□□ -1.45
SMG1-215ENST00000568239 RFPL4AL1F8VTS6 287 aa5.97□□□□□ -1.45
SMG1-215ENST00000568239 HAND1O96004 215 aa5.97□□□□□ -1.45
SMG1-215ENST00000568239 SFTPCP11686 197 aa5.97□□□□□ -1.45
SMG1-215ENST00000568239 ZNF81P51508 661 aa5.97□□□□□ -1.45
SMG1-215ENST00000568239 H2BFSP57053 126 aa5.97□□□□□ -1.45
SMG1-215ENST00000568239 TAS2R31P59538 309 aa5.97□□□□□ -1.45
SMG1-215ENST00000568239 ERVK11-1P61568 191 aa5.97□□□□□ -1.45
SMG1-215ENST00000568239 C3orf36Q3SXR2 165 aa5.97□□□□□ -1.45
SMG1-215ENST00000568239 DCAF12L2Q5VW00 463 aa5.97□□□□□ -1.45
SMG1-215ENST00000568239 SEZ6L2Q6UXD5 910 aa5.97□□□□□ -1.45
SMG1-215ENST00000568239 C20orf204Q6ZNR8 217 aa5.97□□□□□ -1.45
SMG1-215ENST00000568239 LHFPL1Q86WI0 220 aa5.97□□□□□ -1.45
SMG1-215ENST00000568239 SPICQ8N5J4 248 aa5.97□□□□□ -1.45
SMG1-215ENST00000568239 ZBTB8BQ8NAP8 495 aaPredicted RBP5.97□□□□□ -1.45
SMG1-215ENST00000568239 POC1AQ8NBT0 407 aa5.97□□□□□ -1.45
SMG1-215ENST00000568239 UBALD1Q8TB05 177 aa5.97□□□□□ -1.45
SMG1-215ENST00000568239 LINC01560Q8TB33 94 aa5.97□□□□□ -1.45
SMG1-215ENST00000568239 CA5BP1Q8WTZ4 195 aa5.97□□□□□ -1.45
SMG1-215ENST00000568239 LIME1Q9H400 295 aa5.97□□□□□ -1.45
SMG1-215ENST00000568239 SLC23A1Q9UHI7 598 aa5.97□□□□□ -1.45
SMG1-215ENST00000568239 GLS2Q9UI32 602 aa5.97□□□□□ -1.45
SMG1-215ENST00000568239 TRAPPC2LQ9UL33 140 aa5.97□□□□□ -1.45
SMG1-215ENST00000568239 TEX13DA0A0J9YY54 714 aaPredicted RBP5.97□□□□□ -1.45
SMG1-215ENST00000568239 C13orf42A0A1B0GVH6 325 aa5.97□□□□□ -1.45
SMG1-215ENST00000568239 SLC33A1O00400 549 aaPredicted RBP5.97□□□□□ -1.45
SMG1-215ENST00000568239 FOSL1P15407 271 aa5.97□□□□□ -1.45
SMG1-215ENST00000568239 ZBTB25P24278 435 aa5.97□□□□□ -1.45
SMG1-215ENST00000568239 HERV-K104P61576 105 aa5.97□□□□□ -1.45
SMG1-215ENST00000568239 TMEM95Q3KNT9 176 aa5.97□□□□□ -1.45
SMG1-215ENST00000568239 ABCA11PQ4W5N1 156 aa5.97□□□□□ -1.45
SMG1-215ENST00000568239 SPRNQ5BIV9 151 aa5.97□□□□□ -1.45
SMG1-215ENST00000568239 Q6P435 159 aa5.97□□□□□ -1.45
SMG1-215ENST00000568239 MOGAT3Q86VF5 341 aa5.97□□□□□ -1.45
SMG1-215ENST00000568239 ASCC1Q8N9N2 400 aaKnown RBP5.97□□□□□ -1.45
SMG1-215ENST00000568239 OR11H4Q8NGC9 324 aa5.97□□□□□ -1.45
SMG1-215ENST00000568239 PRR7Q8TB68 274 aa5.97□□□□□ -1.45
SMG1-215ENST00000568239 ITLN1Q8WWA0 313 aa5.97□□□□□ -1.45
SMG1-215ENST00000568239 SEC22AQ96IW7 307 aa5.97□□□□□ -1.45
SMG1-215ENST00000568239 TMEM246Q9BRR3 403 aa5.97□□□□□ -1.45
SMG1-215ENST00000568239 RTBDNQ9BSG5 229 aaPredicted RBP5.97□□□□□ -1.45
SMG1-215ENST00000568239 CLEC4MQ9H2X3 399 aaPredicted RBP5.97□□□□□ -1.45
SMG1-215ENST00000568239 Q9N2K0 584 aa5.97□□□□□ -1.45
SMG1-215ENST00000568239 NGBQ9NPG2 151 aa5.97□□□□□ -1.45
SMG1-215ENST00000568239 DNAJB11Q9UBS4 358 aa5.97□□□□□ -1.45
SMG1-215ENST00000568239 KIR2DS1A0A191URI9 304 aa5.97□□□□□ -1.45
SMG1-215ENST00000568239 MEX3AA1L020 520 aaKnown RBP5.97□□□□□ -1.45
SMG1-215ENST00000568239 PTBP3O95758 552 aaKnown RBP5.97□□□□□ -1.45
SMG1-215ENST00000568239 NAPSAO96009 420 aa5.97□□□□□ -1.45
SMG1-215ENST00000568239 TK1P04183 234 aa5.97□□□□□ -1.45
SMG1-215ENST00000568239 OR4A8P0C604 315 aa5.97□□□□□ -1.45
SMG1-215ENST00000568239 ZNF728P0DKX0 622 aa5.97□□□□□ -1.45
SMG1-215ENST00000568239 GRNP28799 593 aaKnown RBP5.97□□□□□ -1.45
SMG1-215ENST00000568239 CHRNB4P30926 498 aa5.97□□□□□ -1.45
SMG1-215ENST00000568239 PMELP40967 661 aa5.97□□□□□ -1.45
SMG1-215ENST00000568239 KIR2DS4P43632 304 aa5.97□□□□□ -1.45
SMG1-215ENST00000568239 ASCL1P50553 236 aa5.97□□□□□ -1.45
SMG1-215ENST00000568239 KIR2DS1Q14954 304 aa5.97□□□□□ -1.45
SMG1-215ENST00000568239 ZNF146Q15072 292 aa5.97□□□□□ -1.45
SMG1-215ENST00000568239 LRRC37A5PQ49AS3 106 aa5.97□□□□□ -1.45
SMG1-215ENST00000568239 PHLDA2Q53GA4 152 aa5.97□□□□□ -1.45
SMG1-215ENST00000568239 ACP7Q6ZNF0 438 aa5.97□□□□□ -1.45
SMG1-215ENST00000568239 ZCCHC24Q8N2G6 241 aaKnown RBP5.97□□□□□ -1.45
SMG1-215ENST00000568239 MRPL24Q96A35 216 aaKnown RBP5.97□□□□□ -1.45
SMG1-215ENST00000568239 TMEM230Q96A57 120 aa5.97□□□□□ -1.45
SMG1-215ENST00000568239 RHOFQ9HBH0 211 aa5.97□□□□□ -1.45
SMG1-215ENST00000568239 TMEM165Q9HC07 324 aa5.97□□□□□ -1.45
SMG1-215ENST00000568239 IGLV3-9A0A075B6K5 115 aa5.96□□□□□ -1.46
SMG1-215ENST00000568239 IGHV3OR15-7A0A075B7D8 119 aa5.96□□□□□ -1.46
SMG1-215ENST00000568239 C5orf51A6NDU8 294 aa5.96□□□□□ -1.46
SMG1-215ENST00000568239 A6NJY4 79 aa5.96□□□□□ -1.46
SMG1-215ENST00000568239 PSPNO60542 156 aa5.96□□□□□ -1.46
SMG1-215ENST00000568239 GIPP09681 153 aaPredicted RBP5.96□□□□□ -1.46
SMG1-215ENST00000568239 AADACP22760 399 aa5.96□□□□□ -1.46
SMG1-215ENST00000568239 GABRA2P47869 451 aa5.96□□□□□ -1.46
SMG1-215ENST00000568239 TNFAIP6P98066 277 aaPredicted RBP5.96□□□□□ -1.46
SMG1-215ENST00000568239 SMIM21Q3B7S5 101 aa5.96□□□□□ -1.46
SMG1-215ENST00000568239 SPIN3Q5JUX0 258 aa5.96□□□□□ -1.46
SMG1-215ENST00000568239 CLEC18BQ6UXF7 455 aa5.96□□□□□ -1.46
SMG1-215ENST00000568239 PEG10Q86TG7 708 aaKnown RBP5.96□□□□□ -1.46
SMG1-215ENST00000568239 MRPL30Q8TCC3 161 aaKnown RBP5.96□□□□□ -1.46
SMG1-215ENST00000568239 PLPPR2Q96GM1 343 aa5.96□□□□□ -1.46
SMG1-215ENST00000568239 MEGF10Q96KG7 1140 aa5.96□□□□□ -1.46
SMG1-215ENST00000568239 RIMS4Q9H426 269 aaPredicted RBP5.96□□□□□ -1.46
SMG1-215ENST00000568239 MYOZ1Q9NP98 299 aaPredicted RBP5.96□□□□□ -1.46
SMG1-215ENST00000568239 PIPOXQ9P0Z9 390 aa5.96□□□□□ -1.46
SMG1-215ENST00000568239 NDRG3Q9UGV2 375 aa5.96□□□□□ -1.46
SMG1-215ENST00000568239 PAIP2BQ9ULR5 123 aaKnown RBP5.96□□□□□ -1.46
SMG1-215ENST00000568239 TRDCB7Z8K6 153 aa5.96□□□□□ -1.46
SMG1-215ENST00000568239 HSPA12AO43301 675 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms