RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 COL10A1Q03692 680 aa6.43□□□□□ -1.38
SMG1-214ENST00000568038 MADCAM1Q13477 382 aa6.43□□□□□ -1.38
SMG1-214ENST00000568038 IL13RA2Q14627 380 aa6.43□□□□□ -1.38
SMG1-214ENST00000568038 ZNF146Q15072 292 aa6.43□□□□□ -1.38
SMG1-214ENST00000568038 KCNJ8Q15842 424 aa6.43□□□□□ -1.38
SMG1-214ENST00000568038 SPIN3Q5JUX0 258 aa6.43□□□□□ -1.38
SMG1-214ENST00000568038 SHEQ5VZ18 495 aa6.43□□□□□ -1.38
SMG1-214ENST00000568038 STUMQ69YW2 141 aa6.43□□□□□ -1.38
SMG1-214ENST00000568038 Q6P435 159 aa6.43□□□□□ -1.38
SMG1-214ENST00000568038 DUX4L9Q6RFH8 374 aaPredicted RBP6.43□□□□□ -1.38
SMG1-214ENST00000568038 DNM1P46Q6ZS02 220 aa6.43□□□□□ -1.38
SMG1-214ENST00000568038 BIVMQ86UB2 503 aa6.43□□□□□ -1.38
SMG1-214ENST00000568038 CMTM4Q8IZR5 234 aa6.43□□□□□ -1.38
SMG1-214ENST00000568038 MUC20Q8N307 709 aaPredicted RBP6.43□□□□□ -1.38
SMG1-214ENST00000568038 FAM216BQ8N7L0 139 aa6.43□□□□□ -1.38
SMG1-214ENST00000568038 ASCC1Q8N9N2 400 aaKnown RBP6.43□□□□□ -1.38
SMG1-214ENST00000568038 CLDND2Q8NHS1 167 aa6.43□□□□□ -1.38
SMG1-214ENST00000568038 PHF21AQ96BD5 680 aa6.43□□□□□ -1.38
SMG1-214ENST00000568038 SLC25A38Q96DW6 304 aa6.43□□□□□ -1.38
SMG1-214ENST00000568038 MRPS24Q96EL2 167 aaKnown RBP6.43□□□□□ -1.38
SMG1-214ENST00000568038 Q96MF0 132 aa6.43□□□□□ -1.38
SMG1-214ENST00000568038 GAFA1Q96PS6 74 aa6.43□□□□□ -1.38
SMG1-214ENST00000568038 FOXC2Q99958 501 aa6.43□□□□□ -1.38
SMG1-214ENST00000568038 TM2D1Q9BX74 207 aa6.43□□□□□ -1.38
SMG1-214ENST00000568038 LPAR5Q9H1C0 372 aa6.43□□□□□ -1.38
SMG1-214ENST00000568038 ZNF665Q9H7R5 613 aa6.43□□□□□ -1.38
SMG1-214ENST00000568038 RHBDL2Q9NX52 303 aa6.43□□□□□ -1.38
SMG1-214ENST00000568038 ING3Q9NXR8 418 aa6.43□□□□□ -1.38
SMG1-214ENST00000568038 DUX4Q9UBX2 424 aa6.43□□□□□ -1.38
SMG1-214ENST00000568038 ZNF222Q9UK12 451 aa6.43□□□□□ -1.38
SMG1-214ENST00000568038 ETV7Q9Y603 341 aa6.43□□□□□ -1.38
SMG1-214ENST00000568038 A0A075B6Q4 140 aa6.42□□□□□ -1.38
SMG1-214ENST00000568038 IGHV4-61A0A0C4DH41 118 aa6.42□□□□□ -1.38
SMG1-214ENST00000568038 UBE2QL1A1L167 161 aa6.42□□□□□ -1.38
SMG1-214ENST00000568038 METTL21EPA6NDL7 271 aa6.42□□□□□ -1.38
SMG1-214ENST00000568038 VWC2LB2RUY7 222 aa6.42□□□□□ -1.38
SMG1-214ENST00000568038 TNFRSF13BO14836 293 aaPredicted RBP6.42□□□□□ -1.38
SMG1-214ENST00000568038 NDUFA2O43678 99 aa6.42□□□□□ -1.38
SMG1-214ENST00000568038 CHRM2P08172 466 aa6.42□□□□□ -1.38
SMG1-214ENST00000568038 RPS2P15880 293 aaKnown RBP6.42□□□□□ -1.38
SMG1-214ENST00000568038 SLC25A16P16260 332 aa6.42□□□□□ -1.38
SMG1-214ENST00000568038 FUT3P21217 361 aa6.42□□□□□ -1.38
SMG1-214ENST00000568038 SCAND1P57086 179 aa6.42□□□□□ -1.38
SMG1-214ENST00000568038 DYNC1I2Q13409 638 aaKnown RBP6.42□□□□□ -1.38
SMG1-214ENST00000568038 MPV17LQ2QL34 196 aa6.42□□□□□ -1.38
SMG1-214ENST00000568038 MOGAT2Q3SYC2 334 aa6.42□□□□□ -1.38
SMG1-214ENST00000568038 TMEM155Q4W5P6 130 aa6.42□□□□□ -1.38
SMG1-214ENST00000568038 PAN3Q58A45 887 aaKnown RBP6.42□□□□□ -1.38
SMG1-214ENST00000568038 NHLRC3Q5JS37 347 aa6.42□□□□□ -1.38
SMG1-214ENST00000568038 UBE2NLQ5JXB2 153 aa6.42□□□□□ -1.38
SMG1-214ENST00000568038 ATPAF1Q5TC12 328 aaPredicted RBP6.42□□□□□ -1.38
SMG1-214ENST00000568038 SIGIRRQ6IA17 410 aa6.42□□□□□ -1.38
SMG1-214ENST00000568038 PRSS57Q6UWY2 283 aa6.42□□□□□ -1.38
SMG1-214ENST00000568038 ZNF788Q6ZQV5 615 aa6.42□□□□□ -1.38
SMG1-214ENST00000568038 DCDC5Q6ZRR9 648 aa6.42□□□□□ -1.38
SMG1-214ENST00000568038 SLC36A1Q7Z2H8 476 aa6.42□□□□□ -1.38
SMG1-214ENST00000568038 RTN4RL2Q86UN3 420 aa6.42□□□□□ -1.38
SMG1-214ENST00000568038 IZUMO1Q8IYV9 350 aa6.42□□□□□ -1.38
SMG1-214ENST00000568038 FGFRL1Q8N441 504 aa6.42□□□□□ -1.38
SMG1-214ENST00000568038 BPIFB2Q8N4F0 458 aa6.42□□□□□ -1.38
SMG1-214ENST00000568038 SPICQ8N5J4 248 aa6.42□□□□□ -1.38
SMG1-214ENST00000568038 SUMF2Q8NBJ7 301 aa6.42□□□□□ -1.38
SMG1-214ENST00000568038 CHST4Q8NCG5 386 aa6.42□□□□□ -1.38
SMG1-214ENST00000568038 ZNRF1Q8ND25 227 aa6.42□□□□□ -1.38
SMG1-214ENST00000568038 WFDC11Q8NEX6 87 aa6.42□□□□□ -1.38
SMG1-214ENST00000568038 TMEM185AQ8NFB2 350 aa6.42□□□□□ -1.38
SMG1-214ENST00000568038 OR56B1Q8NGI3 324 aa6.42□□□□□ -1.38
SMG1-214ENST00000568038 PTX4Q96A99 478 aa6.42□□□□□ -1.38
SMG1-214ENST00000568038 MED30Q96HR3 178 aa6.42□□□□□ -1.38
SMG1-214ENST00000568038 CYYR1Q96J86 154 aa6.42□□□□□ -1.38
SMG1-214ENST00000568038 NEDD4LQ96PU5 975 aa6.42□□□□□ -1.38
SMG1-214ENST00000568038 CHST6Q9GZX3 395 aa6.42□□□□□ -1.38
SMG1-214ENST00000568038 PPA2Q9H2U2 334 aa6.42□□□□□ -1.38
SMG1-214ENST00000568038 PATZ1Q9HBE1 687 aaKnown RBP6.42□□□□□ -1.38
SMG1-214ENST00000568038 PLEKHJ1Q9NW61 149 aa6.42□□□□□ -1.38
SMG1-214ENST00000568038 CTSZQ9UBR2 303 aa6.42□□□□□ -1.38
SMG1-214ENST00000568038 MIOXQ9UGB7 285 aa6.42□□□□□ -1.38
SMG1-214ENST00000568038 MAB21L2Q9Y586 359 aa6.42□□□□□ -1.38
SMG1-214ENST00000568038 PEX16Q9Y5Y5 336 aa6.42□□□□□ -1.38
SMG1-214ENST00000568038 PRRC2AP48634 2157 aaKnown RBP6.42□□□□□ -1.38
SMG1-214ENST00000568038 GCN1Q92616 2671 aaKnown RBP6.42□□□□□ -1.38
SMG1-214ENST00000568038 TRAV24A0A0B4J272 114 aa6.41□□□□□ -1.38
SMG1-214ENST00000568038 FAM90A10PA6NDY2 464 aa6.41□□□□□ -1.38
SMG1-214ENST00000568038 FAM90A18PA6NE21 464 aa6.41□□□□□ -1.38
SMG1-214ENST00000568038 FAM90A16PA6NEW6 464 aa6.41□□□□□ -1.38
SMG1-214ENST00000568038 FAM90A20PA6NIJ5 464 aa6.41□□□□□ -1.38
SMG1-214ENST00000568038 FAM90A8PA6NJQ4 464 aa6.41□□□□□ -1.38
SMG1-214ENST00000568038 FAM90A7PA6NKC0 464 aa6.41□□□□□ -1.38
SMG1-214ENST00000568038 FAM90A22PA8MWA6 464 aa6.41□□□□□ -1.38
SMG1-214ENST00000568038 FAM90A12PA8MX19 464 aa6.41□□□□□ -1.38
SMG1-214ENST00000568038 FAM90A5PA8MXJ8 464 aa6.41□□□□□ -1.38
SMG1-214ENST00000568038 FAM90A23PA8MXZ1 464 aa6.41□□□□□ -1.38
SMG1-214ENST00000568038 MCRIP1C9JLW8 97 aa6.41□□□□□ -1.38
SMG1-214ENST00000568038 RAB27BO00194 218 aa6.41□□□□□ -1.38
SMG1-214ENST00000568038 SLC33A1O00400 549 aaPredicted RBP6.41□□□□□ -1.38
SMG1-214ENST00000568038 DVL1O14640 695 aa6.41□□□□□ -1.38
SMG1-214ENST00000568038 SIGLEC5O15389 551 aa6.41□□□□□ -1.38
SMG1-214ENST00000568038 NDUFB3O43676 98 aa6.41□□□□□ -1.38
SMG1-214ENST00000568038 PDCD6O75340 191 aa6.41□□□□□ -1.38
SMG1-214ENST00000568038 FSTL3O95633 263 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms