RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 RAB27BO00194 218 aa12.3□□□□□ -0.44
SPG7-213ENST00000566221 HSPB6O14558 160 aa12.3□□□□□ -0.44
SPG7-213ENST00000566221 DVL1O14640 695 aa12.3□□□□□ -0.44
SPG7-213ENST00000566221 SOCS1O15524 211 aa12.3□□□□□ -0.44
SPG7-213ENST00000566221 PSPNO60542 156 aa12.3□□□□□ -0.44
SPG7-213ENST00000566221 TK1P04183 234 aa12.3□□□□□ -0.44
SPG7-213ENST00000566221 CSN2P05814 226 aa12.3□□□□□ -0.44
SPG7-213ENST00000566221 OR3A1P47881 315 aa12.3□□□□□ -0.44
SPG7-213ENST00000566221 LOXL1Q08397 574 aaPredicted RBP12.3□□□□□ -0.44
SPG7-213ENST00000566221 DCTN2Q13561 401 aaKnown RBP12.3□□□□□ -0.44
SPG7-213ENST00000566221 RBM39Q14498 530 aaKnown RBP12.3□□□□□ -0.44
SPG7-213ENST00000566221 ARL6IP1Q15041 203 aa12.3□□□□□ -0.44
SPG7-213ENST00000566221 GRK1Q15835 563 aa12.3□□□□□ -0.44
SPG7-213ENST00000566221 NKAPLQ5M9Q1 402 aa12.3□□□□□ -0.44
SPG7-213ENST00000566221 FAM131AQ6UXB0 335 aa12.3□□□□□ -0.44
SPG7-213ENST00000566221 C17orf107Q6ZR85 190 aa12.3□□□□□ -0.44
SPG7-213ENST00000566221 NEK7Q8TDX7 302 aa12.3□□□□□ -0.44
SPG7-213ENST00000566221 RAB3CQ96E17 227 aa12.3□□□□□ -0.44
SPG7-213ENST00000566221 SSBP3Q9BWW4 388 aaPredicted RBP12.3□□□□□ -0.44
SPG7-213ENST00000566221 REG4Q9BYZ8 158 aa12.3□□□□□ -0.44
SPG7-213ENST00000566221 CLN8Q9UBY8 286 aa12.3□□□□□ -0.44
SPG7-213ENST00000566221 HSF4Q9ULV5 492 aa12.3□□□□□ -0.44
SPG7-213ENST00000566221 V9GYH0 126 aa12.3□□□□□ -0.44
SPG7-213ENST00000566221 MCRIP1C9JLW8 97 aa12.29□□□□□ -0.44
SPG7-213ENST00000566221 RNF223E7ERA6 249 aa12.29□□□□□ -0.44
SPG7-213ENST00000566221 MGST3O14880 152 aa12.29□□□□□ -0.44
SPG7-213ENST00000566221 CTDSPLO15194 276 aa12.29□□□□□ -0.44
SPG7-213ENST00000566221 GPR37O15354 613 aa12.29□□□□□ -0.44
SPG7-213ENST00000566221 XRCC3O43542 346 aa12.29□□□□□ -0.44
SPG7-213ENST00000566221 HIST1H1DP16402 221 aaKnown RBP12.29□□□□□ -0.44
SPG7-213ENST00000566221 CDK2P24941 298 aa12.29□□□□□ -0.44
SPG7-213ENST00000566221 GNB2P62879 340 aa12.29□□□□□ -0.44
SPG7-213ENST00000566221 MRPS10P82664 201 aaKnown RBP12.29□□□□□ -0.44
SPG7-213ENST00000566221 MOGAT2Q3SYC2 334 aa12.29□□□□□ -0.44
SPG7-213ENST00000566221 WDR25Q64LD2 544 aaPredicted RBP12.29□□□□□ -0.44
SPG7-213ENST00000566221 ZNF841Q6ZN19 808 aa12.29□□□□□ -0.44
SPG7-213ENST00000566221 Q6ZTK2 550 aa12.29□□□□□ -0.44
SPG7-213ENST00000566221 GDPD3Q7L5L3 318 aa12.29□□□□□ -0.44
SPG7-213ENST00000566221 C6orf201Q7Z4U5 140 aa12.29□□□□□ -0.44
SPG7-213ENST00000566221 OR4S1Q8NGB4 309 aa12.29□□□□□ -0.44
SPG7-213ENST00000566221 ST8SIA4Q92187 359 aa12.29□□□□□ -0.44
SPG7-213ENST00000566221 ARHGAP5-AS1Q96IT6 56 aa12.29□□□□□ -0.44
SPG7-213ENST00000566221 CHST6Q9GZX3 395 aa12.29□□□□□ -0.44
SPG7-213ENST00000566221 PLEKHJ1Q9NW61 149 aa12.29□□□□□ -0.44
SPG7-213ENST00000566221 AKAP9Q99996 3911 aa12.29□□□□□ -0.44
SPG7-213ENST00000566221 A8MXK9 166 aa12.28□□□□□ -0.44
SPG7-213ENST00000566221 NDUFB7P17568 137 aa12.28□□□□□ -0.44
SPG7-213ENST00000566221 IL2RGP31785 369 aa12.28□□□□□ -0.44
SPG7-213ENST00000566221 TMEM50BP56557 158 aa12.28□□□□□ -0.44
SPG7-213ENST00000566221 SEC61A1P61619 476 aaKnown RBP12.28□□□□□ -0.44
SPG7-213ENST00000566221 PAX5Q02548 391 aa12.28□□□□□ -0.44
SPG7-213ENST00000566221 ATXN7L3Q14CW9 347 aaPredicted RBP12.28□□□□□ -0.44
SPG7-213ENST00000566221 C11orf91Q3C1V1 193 aa12.28□□□□□ -0.44
SPG7-213ENST00000566221 TMEM69Q5SWH9 247 aa12.28□□□□□ -0.44
SPG7-213ENST00000566221 OR4M1Q8NGD0 313 aa12.28□□□□□ -0.44
SPG7-213ENST00000566221 PECRQ9BY49 303 aa12.28□□□□□ -0.44
SPG7-213ENST00000566221 SHARPINQ9H0F6 387 aa12.28□□□□□ -0.44
SPG7-213ENST00000566221 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.28□□□□□ -0.44
SPG7-213ENST00000566221 ZANQ9Y493 2812 aa12.28□□□□□ -0.44
SPG7-213ENST00000566221 FUOMA2VDF0 154 aa12.27□□□□□ -0.45
SPG7-213ENST00000566221 SERPINE3A8MV23 424 aa12.27□□□□□ -0.45
SPG7-213ENST00000566221 MFNGO00587 321 aa12.27□□□□□ -0.45
SPG7-213ENST00000566221 CA11O75493 328 aa12.27□□□□□ -0.45
SPG7-213ENST00000566221 FCN3O75636 299 aa12.27□□□□□ -0.45
SPG7-213ENST00000566221 ERP29P30040 261 aaKnown RBP12.27□□□□□ -0.45
SPG7-213ENST00000566221 IL18Q14116 193 aa12.27□□□□□ -0.45
SPG7-213ENST00000566221 EDDM3AQ14507 147 aa12.27□□□□□ -0.45
SPG7-213ENST00000566221 PLAC9Q5JTB6 97 aa12.27□□□□□ -0.45
SPG7-213ENST00000566221 HACD4Q5VWC8 232 aa12.27□□□□□ -0.45
SPG7-213ENST00000566221 C16orf87Q6PH81 154 aa12.27□□□□□ -0.45
SPG7-213ENST00000566221 BPIFB2Q8N4F0 458 aa12.27□□□□□ -0.45
SPG7-213ENST00000566221 H1FXQ92522 213 aaKnown RBP12.27□□□□□ -0.45
SPG7-213ENST00000566221 SULT4A1Q9BR01 284 aa12.27□□□□□ -0.45
SPG7-213ENST00000566221 SRRQ9GZT4 340 aa12.27□□□□□ -0.45
SPG7-213ENST00000566221 ETAA1Q9NY74 926 aa12.27□□□□□ -0.45
SPG7-213ENST00000566221 LPAR3Q9UBY5 353 aa12.27□□□□□ -0.45
SPG7-213ENST00000566221 ABCA1O95477 2261 aa12.26□□□□□ -0.45
SPG7-213ENST00000566221 TRAV18A0A075B6X5 111 aa12.26□□□□□ -0.45
SPG7-213ENST00000566221 TRBV23-1A0A0A0MS06 115 aa12.26□□□□□ -0.45
SPG7-213ENST00000566221 UBE2QL1A1L167 161 aa12.26□□□□□ -0.45
SPG7-213ENST00000566221 KIAA1324LA8MWY0 1029 aaPredicted RBP12.26□□□□□ -0.45
SPG7-213ENST00000566221 FOXH1O75593 365 aa12.26□□□□□ -0.45
SPG7-213ENST00000566221 ECDO95905 644 aaPredicted RBP12.26□□□□□ -0.45
SPG7-213ENST00000566221 GSTP1P09211 210 aaKnown RBP12.26□□□□□ -0.45
SPG7-213ENST00000566221 GNB3P16520 340 aa12.26□□□□□ -0.45
SPG7-213ENST00000566221 P2RX3P56373 397 aa12.26□□□□□ -0.45
SPG7-213ENST00000566221 EDDM3BP56851 147 aa12.26□□□□□ -0.45
SPG7-213ENST00000566221 PYDC2Q56P42 97 aa12.26□□□□□ -0.45
SPG7-213ENST00000566221 KRBOX4Q5JUW0 171 aa12.26□□□□□ -0.45
SPG7-213ENST00000566221 RSBN1Q5VWQ0 802 aaPredicted RBP12.26□□□□□ -0.45
SPG7-213ENST00000566221 CD276Q5ZPR3 534 aa12.26□□□□□ -0.45
SPG7-213ENST00000566221 BRICD5Q6PL45 260 aa12.26□□□□□ -0.45
SPG7-213ENST00000566221 ZNF497Q6ZNH5 498 aa12.26□□□□□ -0.45
SPG7-213ENST00000566221 RTN4RL2Q86UN3 420 aa12.26□□□□□ -0.45
SPG7-213ENST00000566221 FGFRL1Q8N441 504 aa12.26□□□□□ -0.45
SPG7-213ENST00000566221 PLPPR1Q8TBJ4 325 aa12.26□□□□□ -0.45
SPG7-213ENST00000566221 COQ2Q96H96 371 aa12.26□□□□□ -0.45
SPG7-213ENST00000566221 C1orf159Q96HA4 380 aa12.26□□□□□ -0.45
SPG7-213ENST00000566221 FAAP24Q9BTP7 215 aa12.26□□□□□ -0.45
SPG7-213ENST00000566221 FBN3Q75N90 2809 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms