RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 RTL6Q6ICC9 239 aa14.12□□□□□ -0.15
LINC00554-201ENST00000564841 GPR173Q9NS66 373 aa14.12□□□□□ -0.15
LINC00554-201ENST00000564841 PLEKHJ1Q9NW61 149 aa14.12□□□□□ -0.15
LINC00554-201ENST00000564841 POLR1DQ9Y2S0 133 aa14.12□□□□□ -0.15
LINC00554-201ENST00000564841 H3BP45 60 aa14.12□□□□□ -0.15
LINC00554-201ENST00000564841 TMEM50AO95807 157 aa14.12□□□□□ -0.15
LINC00554-201ENST00000564841 FBLP22087 321 aaKnown RBP14.12□□□□□ -0.15
LINC00554-201ENST00000564841 TAF9Q16594 264 aa14.12□□□□□ -0.15
LINC00554-201ENST00000564841 NUDT16L1Q9BRJ7 211 aaKnown RBP14.12□□□□□ -0.15
LINC00554-201ENST00000564841 VSIRQ9H7M9 311 aa14.12□□□□□ -0.15
LINC00554-201ENST00000564841 LRFN1Q9P244 771 aa14.12□□□□□ -0.15
LINC00554-201ENST00000564841 CACNA1HO95180 2353 aa14.11□□□□□ -0.15
LINC00554-201ENST00000564841 NPIPA5E9PKD4 350 aa14.11□□□□□ -0.15
LINC00554-201ENST00000564841 IL33O95760 270 aa14.11□□□□□ -0.15
LINC00554-201ENST00000564841 ZNF728P0DKX0 622 aa14.11□□□□□ -0.15
LINC00554-201ENST00000564841 GP1BBP13224 206 aa14.11□□□□□ -0.15
LINC00554-201ENST00000564841 IRF2P14316 349 aa14.11□□□□□ -0.15
LINC00554-201ENST00000564841 ZNF43P17038 809 aa14.11□□□□□ -0.15
LINC00554-201ENST00000564841 DUSP1P28562 367 aa14.11□□□□□ -0.15
LINC00554-201ENST00000564841 SFTPDP35247 375 aa14.11□□□□□ -0.15
LINC00554-201ENST00000564841 ZNF154Q13106 437 aa14.11□□□□□ -0.15
LINC00554-201ENST00000564841 GNMTQ14749 295 aa14.11□□□□□ -0.15
LINC00554-201ENST00000564841 ARSJQ5FYB0 599 aaPredicted RBP14.11□□□□□ -0.15
LINC00554-201ENST00000564841 CARD17Q5XLA6 110 aa14.11□□□□□ -0.15
LINC00554-201ENST00000564841 ODF3L1Q8IXM7 274 aa14.11□□□□□ -0.15
LINC00554-201ENST00000564841 LGI3Q8N145 548 aa14.11□□□□□ -0.15
LINC00554-201ENST00000564841 DNASE2BQ8WZ79 361 aa14.11□□□□□ -0.15
LINC00554-201ENST00000564841 MSI2Q96DH6 328 aaKnown RBP14.11□□□□□ -0.15
LINC00554-201ENST00000564841 TP53RKQ96S44 253 aa14.11□□□□□ -0.15
LINC00554-201ENST00000564841 NPIPA1Q9UND3 350 aa14.11□□□□□ -0.15
LINC00554-201ENST00000564841 TECTAO75443 2155 aa14.11□□□□□ -0.15
LINC00554-201ENST00000564841 ANGPTL7O43827 346 aa14.11□□□□□ -0.15
LINC00554-201ENST00000564841 RND2P52198 227 aa14.11□□□□□ -0.15
LINC00554-201ENST00000564841 POLR2HP52434 150 aaKnown RBP14.11□□□□□ -0.15
LINC00554-201ENST00000564841 HSD17B7P56937 341 aa14.11□□□□□ -0.15
LINC00554-201ENST00000564841 H3F3AP84243 136 aa14.11□□□□□ -0.15
LINC00554-201ENST00000564841 SMDT1Q9H4I9 107 aa14.11□□□□□ -0.15
LINC00554-201ENST00000564841 SLC2A9Q9NRM0 540 aa14.11□□□□□ -0.15
LINC00554-201ENST00000564841 FUT9Q9Y231 359 aa14.11□□□□□ -0.15
LINC00554-201ENST00000564841 POLR3KQ9Y2Y1 108 aaPredicted RBP14.11□□□□□ -0.15
LINC00554-201ENST00000564841 TIAF1O95411 115 aa14.1□□□□□ -0.15
LINC00554-201ENST00000564841 CYB5R3P00387 301 aaPredicted RBP14.1□□□□□ -0.15
LINC00554-201ENST00000564841 TK1P04183 234 aa14.1□□□□□ -0.15
LINC00554-201ENST00000564841 PGCP20142 388 aa14.1□□□□□ -0.15
LINC00554-201ENST00000564841 RAB4AP20338 218 aa14.1□□□□□ -0.15
LINC00554-201ENST00000564841 MRPS11P82912 194 aaKnown RBP14.1□□□□□ -0.15
LINC00554-201ENST00000564841 SHBQ15464 509 aa14.1□□□□□ -0.15
LINC00554-201ENST00000564841 ADIRFQ15847 76 aa14.1□□□□□ -0.15
LINC00554-201ENST00000564841 C17orf82Q86X59 251 aaPredicted RBP14.1□□□□□ -0.15
LINC00554-201ENST00000564841 SLC38A9Q8NBW4 561 aa14.1□□□□□ -0.15
LINC00554-201ENST00000564841 OR6C1Q96RD1 312 aa14.1□□□□□ -0.15
LINC00554-201ENST00000564841 CCNL2Q96S94 520 aaPredicted RBP14.1□□□□□ -0.15
LINC00554-201ENST00000564841 PCGF1Q9BSM1 259 aa14.1□□□□□ -0.15
LINC00554-201ENST00000564841 DKKL1Q9UK85 242 aa14.1□□□□□ -0.15
LINC00554-201ENST00000564841 PPIAL4AQ9Y536 164 aa14.1□□□□□ -0.15
LINC00554-201ENST00000564841 ADAMTS9Q9P2N4 1935 aa14.1□□□□□ -0.15
LINC00554-201ENST00000564841 TOX3O15405 576 aaPredicted RBP14.1□□□□□ -0.15
LINC00554-201ENST00000564841 ERVFC1-1P60608 527 aa14.1□□□□□ -0.15
LINC00554-201ENST00000564841 RPP30P78346 268 aaKnown RBP14.1□□□□□ -0.15
LINC00554-201ENST00000564841 ANKRD39Q53RE8 183 aa14.1□□□□□ -0.15
LINC00554-201ENST00000564841 ZNF774Q6NX45 483 aa14.1□□□□□ -0.15
LINC00554-201ENST00000564841 LIAT1Q6ZQX7 453 aa14.1□□□□□ -0.15
LINC00554-201ENST00000564841 CALHM1Q8IU99 346 aa14.1□□□□□ -0.15
LINC00554-201ENST00000564841 BATF2Q8N1L9 274 aa14.1□□□□□ -0.15
LINC00554-201ENST00000564841 FAM89BQ8N5H3 189 aa14.1□□□□□ -0.15
LINC00554-201ENST00000564841 TMEM252Q8N6L7 170 aa14.1□□□□□ -0.15
LINC00554-201ENST00000564841 C18orf12Q96KH6 178 aa14.1□□□□□ -0.15
LINC00554-201ENST00000564841 ANXA10Q9UJ72 324 aa14.1□□□□□ -0.15
LINC00554-201ENST00000564841 FOXI3A8MTJ6 420 aaPredicted RBP14.09□□□□□ -0.15
LINC00554-201ENST00000564841 GUSBP08236 651 aa14.09□□□□□ -0.15
LINC00554-201ENST00000564841 IL13RA2Q14627 380 aa14.09□□□□□ -0.15
LINC00554-201ENST00000564841 HLA-BQ31612 363 aa14.09□□□□□ -0.15
LINC00554-201ENST00000564841 SP5Q6BEB4 398 aaPredicted RBP14.09□□□□□ -0.15
LINC00554-201ENST00000564841 SSX7Q7RTT5 188 aa14.09□□□□□ -0.15
LINC00554-201ENST00000564841 ASB10Q8WXI3 467 aa14.09□□□□□ -0.15
LINC00554-201ENST00000564841 CLDN23Q96B33 292 aa14.09□□□□□ -0.15
LINC00554-201ENST00000564841 LOC102723971A0A1B0GUV8 181 aa14.09□□□□□ -0.15
LINC00554-201ENST00000564841 A0A1W2PR80 420 aa14.09□□□□□ -0.15
LINC00554-201ENST00000564841 NPIPB7O75200 414 aa14.09□□□□□ -0.15
LINC00554-201ENST00000564841 DDAH2O95865 285 aa14.09□□□□□ -0.15
LINC00554-201ENST00000564841 FCGR2AP12318 317 aa14.09□□□□□ -0.15
LINC00554-201ENST00000564841 OR3A1P47881 315 aa14.09□□□□□ -0.15
LINC00554-201ENST00000564841 IDH3GP51553 393 aaPredicted RBP14.09□□□□□ -0.15
LINC00554-201ENST00000564841 BIDP55957 195 aa14.09□□□□□ -0.15
LINC00554-201ENST00000564841 C16orf82Q7Z2V1 217 aa14.09□□□□□ -0.15
LINC00554-201ENST00000564841 ZNF248Q8NDW4 579 aa14.09□□□□□ -0.15
LINC00554-201ENST00000564841 R3HDM4Q96D70 268 aa14.09□□□□□ -0.15
LINC00554-201ENST00000564841 LHFPL6Q9Y693 200 aa14.09□□□□□ -0.15
LINC00554-201ENST00000564841 TRBV24-1A0A075B6N3 115 aa14.09□□□□□ -0.15
LINC00554-201ENST00000564841 A0A1W2PPQ1 181 aa14.09□□□□□ -0.15
LINC00554-201ENST00000564841 NUPR1O60356 82 aa14.09□□□□□ -0.15
LINC00554-201ENST00000564841 FBXW4P57775 412 aa14.09□□□□□ -0.15
LINC00554-201ENST00000564841 CCL7P80098 99 aa14.09□□□□□ -0.15
LINC00554-201ENST00000564841 PPA1Q15181 289 aa14.09□□□□□ -0.15
LINC00554-201ENST00000564841 CARFQ8N187 725 aa14.09□□□□□ -0.15
LINC00554-201ENST00000564841 NOXO1Q8NFA2 376 aa14.09□□□□□ -0.15
LINC00554-201ENST00000564841 ZNF721Q8TF20 911 aa14.09□□□□□ -0.15
LINC00554-201ENST00000564841 KCNK17Q96T54 332 aa14.09□□□□□ -0.15
LINC00554-201ENST00000564841 SDF2L1Q9HCN8 221 aa14.09□□□□□ -0.15
LINC00554-201ENST00000564841 CHST11Q9NPF2 352 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 137.2 ms