RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 DDIT4LQ96D03 193 aa1.53□□□□□ -2.16
CHD9-209ENST00000564255 SDHCQ99643 169 aaPredicted RBP1.53□□□□□ -2.16
CHD9-209ENST00000564255 PITX2Q99697 317 aa1.53□□□□□ -2.16
CHD9-209ENST00000564255 SUCNR1Q9BXA5 334 aa1.53□□□□□ -2.16
CHD9-209ENST00000564255 MS4A8Q9BY19 250 aa1.53□□□□□ -2.16
CHD9-209ENST00000564255 MRPL20Q9BYC9 149 aaKnown RBP1.53□□□□□ -2.16
CHD9-209ENST00000564255 S4R3C0 116 aa1.53□□□□□ -2.16
CHD9-209ENST00000564255 BLMP54132 1417 aaPredicted RBP1.53□□□□□ -2.16
CHD9-209ENST00000564255 FABP12A6NFH5 140 aa1.53□□□□□ -2.17
CHD9-209ENST00000564255 GOLGA8RI6L899 631 aa1.53□□□□□ -2.17
CHD9-209ENST00000564255 SULT1C2O00338 296 aa1.53□□□□□ -2.17
CHD9-209ENST00000564255 GPR171O14626 319 aa1.53□□□□□ -2.17
CHD9-209ENST00000564255 TOX3O15405 576 aaPredicted RBP1.53□□□□□ -2.17
CHD9-209ENST00000564255 GYG2O15488 501 aa1.53□□□□□ -2.17
CHD9-209ENST00000564255 CNMDO75829 334 aa1.53□□□□□ -2.17
CHD9-209ENST00000564255 LHBP01229 141 aa1.53□□□□□ -2.17
CHD9-209ENST00000564255 CECR9P0C854 216 aa1.53□□□□□ -2.17
CHD9-209ENST00000564255 LIMS3P0CW19 117 aa1.53□□□□□ -2.17
CHD9-209ENST00000564255 LIMS4P0CW20 117 aa1.53□□□□□ -2.17
CHD9-209ENST00000564255 PIGHQ14442 188 aaPredicted RBP1.53□□□□□ -2.17
CHD9-209ENST00000564255 SSX1Q16384 188 aa1.53□□□□□ -2.17
CHD9-209ENST00000564255 ACTBL2Q562R1 376 aa1.53□□□□□ -2.17
CHD9-209ENST00000564255 TMEM31Q5JXX7 168 aa1.53□□□□□ -2.17
CHD9-209ENST00000564255 KRTAP5-5Q701N2 237 aaPredicted RBP1.53□□□□□ -2.17
CHD9-209ENST00000564255 DCXRQ7Z4W1 244 aa1.53□□□□□ -2.17
CHD9-209ENST00000564255 ST20-AS1Q8NBB2 130 aa1.53□□□□□ -2.17
CHD9-209ENST00000564255 ZNF420Q8TAQ5 688 aaPredicted RBP1.53□□□□□ -2.17
CHD9-209ENST00000564255 RTN4IP1Q8WWV3 396 aaPredicted RBP1.53□□□□□ -2.17
CHD9-209ENST00000564255 WDR34Q96EX3 536 aa1.53□□□□□ -2.17
CHD9-209ENST00000564255 FMC1Q96HJ9 113 aa1.53□□□□□ -2.17
CHD9-209ENST00000564255 IP6K3Q96PC2 410 aa1.53□□□□□ -2.17
CHD9-209ENST00000564255 APOL4Q9BPW4 351 aa1.53□□□□□ -2.17
CHD9-209ENST00000564255 POTEKPQ9BYX7 375 aa1.53□□□□□ -2.17
CHD9-209ENST00000564255 RHOFQ9HBH0 211 aa1.53□□□□□ -2.17
CHD9-209ENST00000564255 C1orf109Q9NX04 203 aa1.53□□□□□ -2.17
CHD9-209ENST00000564255 PAQR5Q9NXK6 330 aaPredicted RBP1.53□□□□□ -2.17
CHD9-209ENST00000564255 TAS2R5Q9NYW4 299 aa1.53□□□□□ -2.17
CHD9-209ENST00000564255 RAB22AQ9UL26 194 aa1.53□□□□□ -2.17
CHD9-209ENST00000564255 SLIT3O75094 1523 aa1.52□□□□□ -2.17
CHD9-209ENST00000564255 MROH2AA6NES4 1674 aa1.52□□□□□ -2.17
CHD9-209ENST00000564255 A2ML1A8K2U0 1454 aa1.52□□□□□ -2.17
CHD9-209ENST00000564255 ATP10BO94823 1461 aa1.52□□□□□ -2.17
CHD9-209ENST00000564255 PLXNB3Q9ULL4 1909 aa1.52□□□□□ -2.17
CHD9-209ENST00000564255 LRCOL1A6NCL2 159 aa1.52□□□□□ -2.17
CHD9-209ENST00000564255 ZNF850A8MQ14 1090 aa1.52□□□□□ -2.17
CHD9-209ENST00000564255 AQP9O43315 295 aa1.52□□□□□ -2.17
CHD9-209ENST00000564255 SLC37A4O43826 429 aa1.52□□□□□ -2.17
CHD9-209ENST00000564255 OR2A4O95047 310 aa1.52□□□□□ -2.17
CHD9-209ENST00000564255 CA2P00918 260 aa1.52□□□□□ -2.17
CHD9-209ENST00000564255 RD3LP0DJH9 198 aa1.52□□□□□ -2.17
CHD9-209ENST00000564255 NPY1RP25929 384 aa1.52□□□□□ -2.17
CHD9-209ENST00000564255 HSPA13P48723 471 aa1.52□□□□□ -2.17
CHD9-209ENST00000564255 HBG1P69891 147 aa1.52□□□□□ -2.17
CHD9-209ENST00000564255 HBG2P69892 147 aa1.52□□□□□ -2.17
CHD9-209ENST00000564255 ATP5G2Q06055 141 aa1.52□□□□□ -2.17
CHD9-209ENST00000564255 MEF2CQ06413 473 aaPredicted RBP1.52□□□□□ -2.17
CHD9-209ENST00000564255 BNIP2Q12982 314 aa1.52□□□□□ -2.17
CHD9-209ENST00000564255 COX19Q49B96 90 aa1.52□□□□□ -2.17
CHD9-209ENST00000564255 TTMPQ5BVD1 217 aa1.52□□□□□ -2.17
CHD9-209ENST00000564255 CLEC18BQ6UXF7 455 aa1.52□□□□□ -2.17
CHD9-209ENST00000564255 TIFABQ6ZNK6 161 aa1.52□□□□□ -2.17
CHD9-209ENST00000564255 SHISA6Q6ZSJ9 500 aa1.52□□□□□ -2.17
CHD9-209ENST00000564255 GALNT10Q86SR1 603 aa1.52□□□□□ -2.17
CHD9-209ENST00000564255 PLCZ1Q86YW0 608 aa1.52□□□□□ -2.17
CHD9-209ENST00000564255 SLC35B4Q969S0 331 aa1.52□□□□□ -2.17
CHD9-209ENST00000564255 OR2A7Q96R45 310 aa1.52□□□□□ -2.17
CHD9-209ENST00000564255 UPF3BQ9BZI7 483 aaKnown RBP1.52□□□□□ -2.17
CHD9-209ENST00000564255 DERL2Q9GZP9 239 aa1.52□□□□□ -2.17
CHD9-209ENST00000564255 WDR54Q9H977 334 aa1.52□□□□□ -2.17
CHD9-209ENST00000564255 RDH14Q9HBH5 336 aa1.52□□□□□ -2.17
CHD9-209ENST00000564255 KIF14Q15058 1648 aa1.52□□□□□ -2.17
CHD9-209ENST00000564255 ABCC3O15438 1527 aa1.52□□□□□ -2.17
CHD9-209ENST00000564255 NCOA3Q9Y6Q9 1424 aa1.52□□□□□ -2.17
CHD9-209ENST00000564255 MIA3Q5JRA6 1907 aa1.52□□□□□ -2.17
CHD9-209ENST00000564255 VWDEQ8N2E2 1590 aa1.52□□□□□ -2.17
CHD9-209ENST00000564255 RALGAPBQ86X10 1494 aa1.52□□□□□ -2.17
CHD9-209ENST00000564255 RAB3GAP2Q9H2M9 1393 aa1.52□□□□□ -2.17
CHD9-209ENST00000564255 IGLV4-60A0A075B6I1 120 aa1.52□□□□□ -2.17
CHD9-209ENST00000564255 H3BQV1 296 aa1.52□□□□□ -2.17
CHD9-209ENST00000564255 J3QLI3 93 aa1.52□□□□□ -2.17
CHD9-209ENST00000564255 MPZL2O60487 215 aa1.52□□□□□ -2.17
CHD9-209ENST00000564255 PDCD6O75340 191 aa1.52□□□□□ -2.17
CHD9-209ENST00000564255 OCMP0CE72 109 aaPredicted RBP1.52□□□□□ -2.17
CHD9-209ENST00000564255 MLNP12872 115 aa1.52□□□□□ -2.17
CHD9-209ENST00000564255 M6PRP20645 277 aa1.52□□□□□ -2.17
CHD9-209ENST00000564255 PSMB9P28065 219 aa1.52□□□□□ -2.17
CHD9-209ENST00000564255 CD40LGP29965 261 aa1.52□□□□□ -2.17
CHD9-209ENST00000564255 MPIP34949 423 aa1.52□□□□□ -2.17
CHD9-209ENST00000564255 ACOT2P49753 483 aa1.52□□□□□ -2.17
CHD9-209ENST00000564255 GTF2A1P52655 376 aaPredicted RBP1.52□□□□□ -2.17
CHD9-209ENST00000564255 ELOCQ15369 112 aa1.52□□□□□ -2.17
CHD9-209ENST00000564255 CDKL4Q5MAI5 379 aa1.52□□□□□ -2.17
CHD9-209ENST00000564255 ZNF678Q5SXM1 525 aa1.52□□□□□ -2.17
CHD9-209ENST00000564255 CLVS2Q5SYC1 327 aa1.52□□□□□ -2.17
CHD9-209ENST00000564255 NIPAL1Q6NVV3 410 aa1.52□□□□□ -2.17
CHD9-209ENST00000564255 AKAP14Q86UN6 197 aa1.52□□□□□ -2.17
CHD9-209ENST00000564255 ITPRIPQ8IWB1 547 aa1.52□□□□□ -2.17
CHD9-209ENST00000564255 STK40Q8N2I9 435 aa1.52□□□□□ -2.17
CHD9-209ENST00000564255 DERL3Q96Q80 235 aa1.52□□□□□ -2.17
CHD9-209ENST00000564255 ZNF717Q9BY31 904 aaPredicted RBP1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms