RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 NKX6-2Q9C056 277 aaPredicted RBP3.99□□□□□ -1.77
SMG1-207ENST00000563235 ZNF442Q9H7R0 627 aa3.99□□□□□ -1.77
SMG1-207ENST00000563235 REEP1Q9H902 201 aa3.99□□□□□ -1.77
SMG1-207ENST00000563235 POPDC3Q9HBV1 291 aa3.99□□□□□ -1.77
SMG1-207ENST00000563235 MEPEQ9NQ76 525 aaPredicted RBP3.99□□□□□ -1.77
SMG1-207ENST00000563235 METTL1Q9UBP6 276 aaKnown RBP3.99□□□□□ -1.77
SMG1-207ENST00000563235 R4GN57 208 aa3.99□□□□□ -1.77
SMG1-207ENST00000563235 IGSF9BQ9UPX0 1349 aa3.98□□□□□ -1.77
SMG1-207ENST00000563235 A0A0G2JLM5 398 aa3.98□□□□□ -1.77
SMG1-207ENST00000563235 ZNF726A6NNF4 738 aa3.98□□□□□ -1.77
SMG1-207ENST00000563235 CRXO43186 299 aaPredicted RBP3.98□□□□□ -1.77
SMG1-207ENST00000563235 GCM2O75603 506 aaPredicted RBP3.98□□□□□ -1.77
SMG1-207ENST00000563235 MMP23AO75900 390 aa3.98□□□□□ -1.77
SMG1-207ENST00000563235 TCN2P20062 427 aa3.98□□□□□ -1.77
SMG1-207ENST00000563235 USF1P22415 310 aaPredicted RBP3.98□□□□□ -1.77
SMG1-207ENST00000563235 TSFMP43897 325 aaKnown RBP3.98□□□□□ -1.77
SMG1-207ENST00000563235 OR1E2P47887 323 aa3.98□□□□□ -1.77
SMG1-207ENST00000563235 DLX1P56177 255 aa3.98□□□□□ -1.77
SMG1-207ENST00000563235 ZNF763Q0D2J5 394 aa3.98□□□□□ -1.77
SMG1-207ENST00000563235 ZNF726P1Q15940 193 aa3.98□□□□□ -1.77
SMG1-207ENST00000563235 UBE2SQ16763 222 aa3.98□□□□□ -1.77
SMG1-207ENST00000563235 ZNF284Q2VY69 593 aa3.98□□□□□ -1.77
SMG1-207ENST00000563235 B3GNTL1Q67FW5 361 aaPredicted RBP3.98□□□□□ -1.77
SMG1-207ENST00000563235 AWAT2Q6E213 333 aa3.98□□□□□ -1.77
SMG1-207ENST00000563235 PIGZQ86VD9 579 aa3.98□□□□□ -1.77
SMG1-207ENST00000563235 C17orf64Q86WR6 236 aa3.98□□□□□ -1.77
SMG1-207ENST00000563235 DEFB123Q8N688 67 aa3.98□□□□□ -1.77
SMG1-207ENST00000563235 ZNRF2Q8NHG8 242 aa3.98□□□□□ -1.77
SMG1-207ENST00000563235 TCTEX1D2Q8WW35 142 aa3.98□□□□□ -1.77
SMG1-207ENST00000563235 WBP1Q96G27 269 aa3.98□□□□□ -1.77
SMG1-207ENST00000563235 SRMSQ9H3Y6 488 aa3.98□□□□□ -1.77
SMG1-207ENST00000563235 SIX2Q9NPC8 291 aa3.98□□□□□ -1.77
SMG1-207ENST00000563235 PLSCR3Q9NRY6 295 aa3.98□□□□□ -1.77
SMG1-207ENST00000563235 CISHQ9NSE2 258 aa3.98□□□□□ -1.77
SMG1-207ENST00000563235 MED9Q9NWA0 146 aa3.98□□□□□ -1.77
SMG1-207ENST00000563235 TAS2R16Q9NYV7 291 aa3.98□□□□□ -1.77
SMG1-207ENST00000563235 MYH9P35579 1960 aaKnown RBP3.98□□□□□ -1.77
SMG1-207ENST00000563235 ROBO3Q96MS0 1386 aa3.98□□□□□ -1.77
SMG1-207ENST00000563235 SSC5DA1L4H1 1573 aa3.98□□□□□ -1.77
SMG1-207ENST00000563235 FAM240AA0A1B0GVK7 77 aa3.98□□□□□ -1.77
SMG1-207ENST00000563235 F8W735 103 aaPredicted RBP3.98□□□□□ -1.77
SMG1-207ENST00000563235 K7EQS6 105 aa3.98□□□□□ -1.77
SMG1-207ENST00000563235 TIMM23O14925 209 aa3.98□□□□□ -1.77
SMG1-207ENST00000563235 OR7C2O60412 319 aa3.98□□□□□ -1.77
SMG1-207ENST00000563235 LYPLA1O75608 230 aaPredicted RBP3.98□□□□□ -1.77
SMG1-207ENST00000563235 NDUFB4O95168 129 aa3.98□□□□□ -1.77
SMG1-207ENST00000563235 AMTP48728 403 aa3.98□□□□□ -1.77
SMG1-207ENST00000563235 TECRLQ5HYJ1 363 aa3.98□□□□□ -1.77
SMG1-207ENST00000563235 ANKRD22Q5VYY1 191 aa3.98□□□□□ -1.77
SMG1-207ENST00000563235 TBPL2Q6SJ96 375 aa3.98□□□□□ -1.77
SMG1-207ENST00000563235 DEFB107AQ8IZN7 70 aa3.98□□□□□ -1.77
SMG1-207ENST00000563235 OR1S1Q8NH92 325 aa3.98□□□□□ -1.77
SMG1-207ENST00000563235 ZNF778Q96MU6 729 aa3.98□□□□□ -1.77
SMG1-207ENST00000563235 C20orf27Q9GZN8 174 aa3.98□□□□□ -1.77
SMG1-207ENST00000563235 LAMTOR2Q9Y2Q5 125 aa3.98□□□□□ -1.77
SMG1-207ENST00000563235 OR51B2Q9Y5P1 312 aa3.98□□□□□ -1.77
SMG1-207ENST00000563235 DDX60LQ5H9U9 1706 aaKnown RBP3.98□□□□□ -1.77
SMG1-207ENST00000563235 SLX4Q8IY92 1834 aa3.98□□□□□ -1.77
SMG1-207ENST00000563235 SPAARA0A1B0GVQ0 90 aa3.98□□□□□ -1.77
SMG1-207ENST00000563235 HMX2A2RU54 273 aa3.98□□□□□ -1.77
SMG1-207ENST00000563235 NCBP2LA6PVI3 153 aaKnown RBP3.98□□□□□ -1.77
SMG1-207ENST00000563235 IDSB3KWA1 339 aa3.98□□□□□ -1.77
SMG1-207ENST00000563235 C2CD4DB7Z1M9 353 aa3.98□□□□□ -1.77
SMG1-207ENST00000563235 M0R1B8 84 aa3.98□□□□□ -1.77
SMG1-207ENST00000563235 CCL21O00585 134 aa3.98□□□□□ -1.77
SMG1-207ENST00000563235 WNT1P04628 370 aa3.98□□□□□ -1.77
SMG1-207ENST00000563235 COL8A1P27658 744 aa3.98□□□□□ -1.77
SMG1-207ENST00000563235 POLR2IP36954 125 aaKnown RBP3.98□□□□□ -1.77
SMG1-207ENST00000563235 RFX2P48378 723 aa3.98□□□□□ -1.77
SMG1-207ENST00000563235 RAB38P57729 211 aa3.98□□□□□ -1.77
SMG1-207ENST00000563235 HTR4Q13639 388 aa3.98□□□□□ -1.77
SMG1-207ENST00000563235 RUNX3Q13761 415 aa3.98□□□□□ -1.77
SMG1-207ENST00000563235 TEDDM1Q5T9Z0 273 aa3.98□□□□□ -1.77
SMG1-207ENST00000563235 ARL9Q6T311 187 aa3.98□□□□□ -1.77
SMG1-207ENST00000563235 ZNF730Q6ZMV8 503 aa3.98□□□□□ -1.77
SMG1-207ENST00000563235 BCDIN3DQ7Z5W3 292 aaKnown RBP3.98□□□□□ -1.77
SMG1-207ENST00000563235 KLHDC8BQ8IXV7 354 aa3.98□□□□□ -1.77
SMG1-207ENST00000563235 FAM24BQ8N5W8 94 aa3.98□□□□□ -1.77
SMG1-207ENST00000563235 ACBD7Q8N6N7 88 aa3.98□□□□□ -1.77
SMG1-207ENST00000563235 KLHDC9Q8NEP7 349 aa3.98□□□□□ -1.77
SMG1-207ENST00000563235 OR1N2Q8NGR9 330 aa3.98□□□□□ -1.77
SMG1-207ENST00000563235 MCFD2Q8NI22 146 aa3.98□□□□□ -1.77
SMG1-207ENST00000563235 SLC7A6Q92536 515 aa3.98□□□□□ -1.77
SMG1-207ENST00000563235 DCUN1D4Q92564 292 aa3.98□□□□□ -1.77
SMG1-207ENST00000563235 ARL11Q969Q4 196 aa3.98□□□□□ -1.77
SMG1-207ENST00000563235 TMEM18Q96B42 140 aa3.98□□□□□ -1.77
SMG1-207ENST00000563235 AURKBQ96GD4 344 aaPredicted RBP3.98□□□□□ -1.77
SMG1-207ENST00000563235 GMPPAQ96IJ6 420 aaPredicted RBP3.98□□□□□ -1.77
SMG1-207ENST00000563235 SLC17A9Q9BYT1 436 aa3.98□□□□□ -1.77
SMG1-207ENST00000563235 PRSS22Q9GZN4 317 aa3.98□□□□□ -1.77
SMG1-207ENST00000563235 SLIRPQ9GZT3 109 aaKnown RBP3.98□□□□□ -1.77
SMG1-207ENST00000563235 EXOSC4Q9NPD3 245 aaKnown RBP3.98□□□□□ -1.77
SMG1-207ENST00000563235 SCP2D1Q9UJQ7 156 aa3.98□□□□□ -1.77
SMG1-207ENST00000563235 COL2A1P02458 1487 aaPredicted RBP3.97□□□□□ -1.77
SMG1-207ENST00000563235 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.97□□□□□ -1.77
SMG1-207ENST00000563235 TMEM189A5PLL7 270 aa3.97□□□□□ -1.77
SMG1-207ENST00000563235 TNFRSF11BO00300 401 aa3.97□□□□□ -1.77
SMG1-207ENST00000563235 ZNF593O00488 134 aaPredicted RBP3.97□□□□□ -1.77
SMG1-207ENST00000563235 RNASET2O00584 256 aaKnown RBP3.97□□□□□ -1.77
SMG1-207ENST00000563235 TOMM40O96008 361 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms