RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 NAXEQ8NCW5 288 aa11.25□□□□□ -0.61
USB1-207ENST00000563149 PLK3Q9H4B4 646 aa11.25□□□□□ -0.61
USB1-207ENST00000563149 OPA3Q9H6K4 179 aa11.25□□□□□ -0.61
USB1-207ENST00000563149 NOSIPQ9Y314 301 aaKnown RBP11.25□□□□□ -0.61
USB1-207ENST00000563149 FBXO7Q9Y3I1 522 aa11.25□□□□□ -0.61
USB1-207ENST00000563149 RBFOX3A6NFN3 312 aa11.24□□□□□ -0.61
USB1-207ENST00000563149 CER1O95813 267 aa11.24□□□□□ -0.61
USB1-207ENST00000563149 CFIP05156 583 aa11.24□□□□□ -0.61
USB1-207ENST00000563149 ACAA1P09110 424 aaPredicted RBP11.24□□□□□ -0.61
USB1-207ENST00000563149 BCL3P20749 454 aa11.24□□□□□ -0.61
USB1-207ENST00000563149 GDF1P27539 372 aa11.24□□□□□ -0.61
USB1-207ENST00000563149 PPP1CCP36873 323 aaKnown RBP11.24□□□□□ -0.61
USB1-207ENST00000563149 POLR2GP62487 172 aaKnown RBP eCLIP11.24□□□□□ -0.61
USB1-207ENST00000563149 PRDX4Q13162 271 aa11.24□□□□□ -0.61
USB1-207ENST00000563149 OR8G1Q15617 311 aa11.24□□□□□ -0.61
USB1-207ENST00000563149 SOHLH1Q5JUK2 328 aa11.24□□□□□ -0.61
USB1-207ENST00000563149 SPIN3Q5JUX0 258 aa11.24□□□□□ -0.61
USB1-207ENST00000563149 ACER2Q5QJU3 275 aa11.24□□□□□ -0.61
USB1-207ENST00000563149 C1QL4Q86Z23 238 aa11.24□□□□□ -0.61
USB1-207ENST00000563149 ZDHHC23Q8IYP9 409 aa11.24□□□□□ -0.61
USB1-207ENST00000563149 SUMF2Q8NBJ7 301 aa11.24□□□□□ -0.61
USB1-207ENST00000563149 CPEB3Q8NE35 698 aaKnown RBP11.24□□□□□ -0.61
USB1-207ENST00000563149 OR5D13Q8NGL4 314 aa11.24□□□□□ -0.61
USB1-207ENST00000563149 KIAA1456Q9P272 454 aa11.24□□□□□ -0.61
USB1-207ENST00000563149 ATP23Q9Y6H3 246 aa11.24□□□□□ -0.61
USB1-207ENST00000563149 TRBV6-6A0A0A6YYG2 114 aa11.23□□□□□ -0.61
USB1-207ENST00000563149 SLC22A20A6NK97 555 aa11.23□□□□□ -0.61
USB1-207ENST00000563149 ZNF724A8MTY0 619 aa11.23□□□□□ -0.61
USB1-207ENST00000563149 TRAPPC2LH3BP13 241 aa11.23□□□□□ -0.61
USB1-207ENST00000563149 C1QL1O75973 258 aa11.23□□□□□ -0.61
USB1-207ENST00000563149 SERPINA7P05543 415 aa11.23□□□□□ -0.61
USB1-207ENST00000563149 WNT2P09544 360 aa11.23□□□□□ -0.61
USB1-207ENST00000563149 SLC25A6P12236 298 aa11.23□□□□□ -0.61
USB1-207ENST00000563149 ZNF14P17017 642 aaPredicted RBP11.23□□□□□ -0.61
USB1-207ENST00000563149 S100GP29377 79 aa11.23□□□□□ -0.61
USB1-207ENST00000563149 AKR1C3P42330 323 aa11.23□□□□□ -0.61
USB1-207ENST00000563149 CYB561P49447 251 aa11.23□□□□□ -0.61
USB1-207ENST00000563149 Q0VFX4 171 aa11.23□□□□□ -0.61
USB1-207ENST00000563149 HIKESHIQ53FT3 197 aa11.23□□□□□ -0.61
USB1-207ENST00000563149 NMSQ5H8A3 153 aa11.23□□□□□ -0.61
USB1-207ENST00000563149 KRBOX4Q5JUW0 171 aa11.23□□□□□ -0.61
USB1-207ENST00000563149 SP5Q6BEB4 398 aaPredicted RBP11.23□□□□□ -0.61
USB1-207ENST00000563149 ZNF818PQ6ZRF7 136 aa11.23□□□□□ -0.61
USB1-207ENST00000563149 CMTM1Q8IZ96 169 aa11.23□□□□□ -0.61
USB1-207ENST00000563149 OR56B2PQ8NGI1 322 aa11.23□□□□□ -0.61
USB1-207ENST00000563149 OR5A2Q8NGI9 324 aa11.23□□□□□ -0.61
USB1-207ENST00000563149 CD300LFQ8TDQ1 290 aa11.23□□□□□ -0.61
USB1-207ENST00000563149 TCFL5Q9UL49 500 aa11.23□□□□□ -0.61
USB1-207ENST00000563149 BOKQ9UMX3 212 aaPredicted RBP11.23□□□□□ -0.61
USB1-207ENST00000563149 MED12Q93074 2177 aa11.23□□□□□ -0.61
USB1-207ENST00000563149 A0A1W2PPH5 198 aa11.23□□□□□ -0.61
USB1-207ENST00000563149 H0Y980 276 aa11.23□□□□□ -0.61
USB1-207ENST00000563149 ADAM20O43506 726 aa11.23□□□□□ -0.61
USB1-207ENST00000563149 SLC34A2O95436 690 aa11.23□□□□□ -0.61
USB1-207ENST00000563149 HBE1P02100 147 aa11.23□□□□□ -0.61
USB1-207ENST00000563149 OTX2P32243 289 aa11.23□□□□□ -0.61
USB1-207ENST00000563149 HAAOP46952 286 aa11.23□□□□□ -0.61
USB1-207ENST00000563149 RAB2AP61019 212 aa11.23□□□□□ -0.61
USB1-207ENST00000563149 IL24Q13007 206 aa11.23□□□□□ -0.61
USB1-207ENST00000563149 SPSB3Q6PJ21 355 aa11.23□□□□□ -0.61
USB1-207ENST00000563149 MRPL21Q7Z2W9 205 aaKnown RBP11.23□□□□□ -0.61
USB1-207ENST00000563149 UBALD2Q8IYN6 164 aa11.23□□□□□ -0.61
USB1-207ENST00000563149 GAPTQ8N292 157 aa11.23□□□□□ -0.61
USB1-207ENST00000563149 IL22RA1Q8N6P7 574 aa11.23□□□□□ -0.61
USB1-207ENST00000563149 ABHD3Q8WU67 409 aa11.23□□□□□ -0.61
USB1-207ENST00000563149 SLAMF9Q96A28 289 aa11.23□□□□□ -0.61
USB1-207ENST00000563149 APOBEC3DQ96AK3 386 aaPredicted RBP11.23□□□□□ -0.61
USB1-207ENST00000563149 SIGLEC12Q96PQ1 595 aa11.23□□□□□ -0.61
USB1-207ENST00000563149 SEBOXQ9HB31 216 aaPredicted RBP11.23□□□□□ -0.61
USB1-207ENST00000563149 DEPPQ9NTK1 212 aa11.23□□□□□ -0.61
USB1-207ENST00000563149 LRP5LA4QPB2 252 aa11.22□□□□□ -0.61
USB1-207ENST00000563149 A6NLC8 198 aa11.22□□□□□ -0.61
USB1-207ENST00000563149 PROB1E7EW31 1015 aa11.22□□□□□ -0.61
USB1-207ENST00000563149 SSSCA1O60232 199 aa11.22□□□□□ -0.61
USB1-207ENST00000563149 SS18L1O75177 396 aaPredicted RBP11.22□□□□□ -0.61
USB1-207ENST00000563149 IFNA17P01571 189 aa11.22□□□□□ -0.61
USB1-207ENST00000563149 IGHV2-5P01817 119 aa11.22□□□□□ -0.61
USB1-207ENST00000563149 SCTP09683 121 aa11.22□□□□□ -0.61
USB1-207ENST00000563149 OR13C7P0DN81 318 aa11.22□□□□□ -0.61
USB1-207ENST00000563149 ARF1P84077 181 aaKnown RBP11.22□□□□□ -0.61
USB1-207ENST00000563149 RNPS1Q15287 305 aaKnown RBP11.22□□□□□ -0.61
USB1-207ENST00000563149 DCAF12Q5T6F0 453 aa11.22□□□□□ -0.61
USB1-207ENST00000563149 LILRB1Q8NHL6 650 aaPredicted RBP11.22□□□□□ -0.61
USB1-207ENST00000563149 RBMXL1Q96E39 390 aaKnown RBP11.22□□□□□ -0.61
USB1-207ENST00000563149 ZNF845Q96IR2 970 aaPredicted RBP11.22□□□□□ -0.61
USB1-207ENST00000563149 HIST1H2AAQ96QV6 131 aa11.22□□□□□ -0.61
USB1-207ENST00000563149 PI4KAP42356 2102 aa11.22□□□□□ -0.61
USB1-207ENST00000563149 A0A087WWC5 75 aa11.21□□□□□ -0.61
USB1-207ENST00000563149 DFFBO76075 338 aa11.21□□□□□ -0.61
USB1-207ENST00000563149 HSPB1P04792 205 aaKnown RBP11.21□□□□□ -0.61
USB1-207ENST00000563149 ARR3P36575 388 aa11.21□□□□□ -0.61
USB1-207ENST00000563149 NOVA1P51513 510 aaKnown RBP11.21□□□□□ -0.61
USB1-207ENST00000563149 DYNLT3P51808 116 aa11.21□□□□□ -0.61
USB1-207ENST00000563149 TLE4Q04727 773 aa11.21□□□□□ -0.61
USB1-207ENST00000563149 CXorf66Q5JRM2 361 aaPredicted RBP11.21□□□□□ -0.61
USB1-207ENST00000563149 OR5C1Q8NGR4 320 aa11.21□□□□□ -0.61
USB1-207ENST00000563149 PLPPR1Q8TBJ4 325 aa11.21□□□□□ -0.61
USB1-207ENST00000563149 TMEM171Q8WVE6 324 aa11.21□□□□□ -0.61
USB1-207ENST00000563149 ISOC2Q96AB3 205 aa11.21□□□□□ -0.61
USB1-207ENST00000563149 ZNF251Q9BRH9 671 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms